Protein : Qrob_P0543800.2 Q. robur
Protein Identifier  ? Qrob_P0543800.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=1) PTHR14326:SF16 - TPX2 (TARGETING PROTEIN FOR XKLP2) FAMILY PROTEIN (PTHR14326:SF16) Gene Prediction Quality  validated
Protein length 

Sequence

Length: 521  
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0007067 mitotic nuclear division A cell cycle process comprising the steps by which the nucleus of a eukaryotic cell divides; the process involves condensation of chromosomal DNA into a highly compacted form. Canonically, mitosis produces two daughter nuclei whose chromosome complement is identical to that of the mother cell.
GO:0005874 microtubule Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle.
GO:0005819 spindle The array of microtubules and associated molecules that forms between opposite poles of a eukaryotic cell during mitosis or meiosis and serves to move the duplicated chromosomes apart.

12 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pmum:103330090 1 519 + 519 Gaps:41 99.80 499 75.90 0.0 caldesmon
blastp_kegg lcl|pper:PRUPE_ppa020426mg 1 519 + 519 Gaps:32 99.80 492 75.97 0.0 hypothetical protein
blastp_kegg lcl|pxb:103955680 1 519 + 519 Gaps:36 99.80 498 73.84 0.0 uncharacterized LOC103955680
blastp_kegg lcl|vvi:100247426 1 517 + 517 Gaps:30 99.40 496 71.40 0.0 uncharacterized LOC100247426
blastp_kegg lcl|rcu:RCOM_0524800 1 519 + 519 Gaps:41 99.63 540 66.73 0.0 hypothetical protein
blastp_kegg lcl|mdm:103442401 1 519 + 519 Gaps:36 99.80 498 72.84 0.0 caldesmon
blastp_kegg lcl|pxb:103951075 1 519 + 519 Gaps:52 99.81 520 69.94 0.0 uncharacterized LOC103951075
blastp_kegg lcl|cmo:103498525 1 520 + 520 Gaps:37 99.61 513 68.10 0.0 uncharacterized protein DDB_G0284459
blastp_kegg lcl|pop:POPTR_0017s12770g 1 517 + 517 Gaps:55 99.44 535 67.11 0.0 POPTRDRAFT_668651 hypothetical protein
blastp_kegg lcl|csv:101223763 1 520 + 520 Gaps:37 99.61 513 67.51 0.0 uncharacterized LOC101223763
blastp_uniprot_sprot sp|F4I2H7|TPX2_ARATH 348 515 + 168 Gaps:59 28.73 790 28.19 2e-17 Protein TPX2 OS Arabidopsis thaliana GN TPX2 PE 1 SV 1
rpsblast_cdd gnl|CDD|191634 416 472 + 57 none 100.00 57 57.89 4e-12 pfam06886 TPX2 Targeting protein for Xklp2 (TPX2). This family represents a conserved region approximately 60 residues long within the eukaryotic targeting protein for Xklp2 (TPX2). Xklp2 is a kinesin-like protein localised on centrosomes throughout the cell cycle and on spindle pole microtubules during metaphase. In Xenopus it has been shown that Xklp2 protein is required for centrosome separation and maintenance of spindle bi-polarity. TPX2 is a microtubule-associated protein that mediates the binding of the C-terminal domain of Xklp2 to microtubules. It is phosphorylated during mitosis in a microtubule-dependent way.

4 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 416 472 57 PF06886 none Targeting protein for Xklp2 (TPX2) IPR027329
PANTHER 299 510 212 PTHR14326 none none IPR009675
Coils 439 465 27 Coil none none none
PANTHER 299 510 212 PTHR14326:SF16 none none none

0 Localization

13 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2003_QTL2_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 87 lod 3,3 8,7
Bourran2_2004_QTL9_peak_Bud_burst_3P Qrob_Chr02 2 s_1C34E9_788 v_12238_322 50 25 75 lod 4,4 10,1
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL2_d13Cf Qrob_Chr02 2 s_1AQA4Z_1644 s_1AK5QX_947 53.67 14,01 79,68 lod 5.6594 0.03
Bourran1_2004_QTL2_peak_Bud_burst_3P Qrob_Chr02 2 s_1AW12F_382 s_1A77MR_223 42 6 64 lod 3,6 9,6
Bourran_2000_2002_QTL2_Delta.F Qrob_Chr02 2 s_1CSO13_1244 s_1AVEUF_1540 55.44 46,71 63,68 lod 7.3232 0.058
Bourran2_2002_QTL7_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 29 52 lod 8,1 16
Bourran2_2002_QTL9_peak_Bud_burst_A4 Qrob_Chr02 2 s_1BFNDA_375 s_1A3VA1_2139 32,5 17 62 lod 3,1 4,2
Bourran2_2003_QTL8_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 0 72 lod 4,4 9,9
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2015_nP_A4 Qrob_Chr02 2 s_1A0FUE_1868 s_1A1UAI_500 20,64 20,47 21,36 lod 5.8 10.9
Bourran2_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 24,87 24,63 26,18 lod 3.8 7
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL6_d13Cf Qrob_Chr02 2 s_1AEP21_172 v_6048_204 46.33 22,5 65,23 lod 4.972 0.03
Bourran1_2004_QTL3_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 46 lod 2,9 6,4

0 Targeting