Protein : Qrob_P0541480.2 Q. robur
Protein Identifier  ? Qrob_P0541480.2 Organism . Name  Quercus robur
Score  99.0 Score Type  egn
Protein Description  (M=1) PTHR23115:SF13 - TRANSLATION ELONGATION FACTOR G Gene Prediction Quality  validated
Protein length 

Sequence

Length: 778  
Kegg Orthology  K02355
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0 Synonyms

6 GO Terms

Identifier Name Description
GO:0005622 intracellular The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
GO:0005525 GTP binding Interacting selectively and non-covalently with GTP, guanosine triphosphate.
GO:0003746 translation elongation factor activity Functions in chain elongation during polypeptide synthesis at the ribosome.
GO:0006414 translational elongation The successive addition of amino acid residues to a nascent polypeptide chain during protein biosynthesis.
GO:0003924 GTPase activity Catalysis of the reaction: GTP + H2O = GDP + phosphate.
GO:0009507 chloroplast A chlorophyll-containing plastid with thylakoids organized into grana and frets, or stroma thylakoids, and embedded in a stroma.

50 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pvu:PHAVU_003G217300g 1 777 + 777 Gaps:8 100.00 779 88.32 0.0 hypothetical protein
blastp_kegg lcl|tcc:TCM_016040 1 777 + 777 Gaps:6 100.00 783 87.87 0.0 Translation elongation factor EFG/EF2 protein
blastp_kegg lcl|cit:102624603 1 777 + 777 Gaps:8 100.00 777 87.64 0.0 elongation factor G chloroplastic-like
blastp_kegg lcl|vvi:100257414 3 777 + 775 Gaps:3 99.87 775 88.76 0.0 elongation factor G chloroplastic-like
blastp_kegg lcl|pper:PRUPE_ppa001690mg 1 777 + 777 Gaps:12 100.00 779 88.45 0.0 hypothetical protein
blastp_kegg lcl|pop:POPTR_0003s11300g 1 777 + 777 Gaps:23 100.00 782 88.24 0.0 POPTRDRAFT_711780 hypothetical protein
blastp_kegg lcl|cmo:103482646 1 777 + 777 Gaps:12 100.00 777 88.42 0.0 elongation factor G-2 chloroplastic
blastp_kegg lcl|pmum:103337242 1 777 + 777 Gaps:12 100.00 779 88.19 0.0 elongation factor G-2 chloroplastic
blastp_kegg lcl|fve:101293391 1 777 + 777 Gaps:11 100.00 778 87.53 0.0 elongation factor G chloroplastic-like
blastp_kegg lcl|csv:101220931 1 777 + 777 Gaps:12 100.00 777 88.29 0.0 elongation factor G chloroplastic-like
blastp_pdb 2rdo_7 83 772 + 690 Gaps:12 99.43 704 59.57 0.0 mol:protein length:704 Elongation factor G
blastp_pdb 3j0e_H 83 772 + 690 Gaps:12 99.72 702 59.57 0.0 mol:na length:702 Elongation factor G
blastp_pdb 3j18_Y 87 768 + 682 Gaps:7 98.26 691 58.32 0.0 mol:protein length:691 elongation factor G
blastp_pdb 2xuy_Y 87 768 + 682 Gaps:7 98.26 691 58.32 0.0 mol:protein length:691 ELONGATION FACTOR G
blastp_pdb 2xsy_Y 87 768 + 682 Gaps:7 98.26 691 58.32 0.0 mol:protein length:691 ELONGATION FACTOR G
blastp_pdb 2wrk_Y 87 768 + 682 Gaps:7 98.26 691 58.32 0.0 mol:protein length:691 ELONGATION FACTOR G
blastp_pdb 2wri_Y 87 768 + 682 Gaps:7 98.26 691 58.32 0.0 mol:protein length:691 ELONGATION FACTOR G
blastp_pdb 2om7_L 87 768 + 682 Gaps:7 98.26 691 58.32 0.0 mol:protein length:691 Elongation factor G
blastp_pdb 1ktv_B 87 768 + 682 Gaps:7 98.26 691 58.32 0.0 mol:protein length:691 ELONGATION FACTOR G
blastp_pdb 1ktv_A 87 768 + 682 Gaps:7 98.26 691 58.32 0.0 mol:protein length:691 ELONGATION FACTOR G
blastp_uniprot_sprot sp|I1K0K6|EFGC2_SOYBN 1 777 + 777 Gaps:9 100.00 780 86.79 0.0 Elongation factor G-2 chloroplastic OS Glycine max GN fusA2 PE 3 SV 1
blastp_uniprot_sprot sp|P34811|EFGC1_SOYBN 1 777 + 777 Gaps:14 100.00 787 86.79 0.0 Elongation factor G-1 chloroplastic OS Glycine max GN fusA1 PE 1 SV 2
blastp_uniprot_sprot sp|Q9SI75|EFGC_ARATH 1 777 + 777 Gaps:14 100.00 783 86.46 0.0 Elongation factor G chloroplastic OS Arabidopsis thaliana GN CPEFG PE 1 SV 1
blastp_uniprot_sprot sp|Q2RQV7|EFG_RHORT 82 770 + 689 Gaps:2 99.28 692 67.98 0.0 Elongation factor G OS Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN fusA PE 3 SV 1
blastp_uniprot_sprot sp|Q2W2I8|EFG_MAGSA 83 770 + 688 Gaps:4 99.14 694 67.15 0.0 Elongation factor G OS Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) GN fusA PE 3 SV 1
blastp_uniprot_sprot sp|A7HWQ8|EFG_PARL1 83 770 + 688 Gaps:6 99.28 691 67.78 0.0 Elongation factor G OS Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) GN fusA PE 3 SV 1
blastp_uniprot_sprot sp|Q8KTB0|EFG_RICBE 87 772 + 686 Gaps:13 99.43 697 64.36 0.0 Elongation factor G OS Rickettsia bellii GN fusA PE 3 SV 1
blastp_uniprot_sprot sp|A8GV17|EFG_RICB8 87 772 + 686 Gaps:13 99.43 697 64.36 0.0 Elongation factor G OS Rickettsia bellii (strain OSU 85-389) GN fusA PE 3 SV 1
blastp_uniprot_sprot sp|Q0ANP7|EFG_MARMM 83 768 + 686 Gaps:2 98.99 691 65.06 0.0 Elongation factor G OS Maricaulis maris (strain MCS10) GN fusA PE 3 SV 1
blastp_uniprot_sprot sp|Q1RHC3|EFG_RICBR 87 772 + 686 Gaps:14 99.43 698 64.27 0.0 Elongation factor G OS Rickettsia bellii (strain RML369-C) GN fusA PE 3 SV 1

36 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Gene3D 88 366 279 G3DSA:3.40.50.300 none none IPR027417
SMART 560 678 119 SM00889 none Elongation factor G, domain IV IPR005517
SUPERFAMILY 484 561 78 SSF54980 none none IPR009022
SUPERFAMILY 87 361 275 SSF52540 none none IPR027417
PANTHER 20 44 25 PTHR23115:SF13 none none none
TIGRFAM 83 772 690 TIGR00484 none EF-G: translation elongation factor G IPR004540
TIGRFAM 90 260 171 TIGR00231 none small_GTP: small GTP-binding protein domain IPR005225
ProSitePatterns 131 146 16 PS00301 none Translational (tr)-type guanine nucleotide-binding (G) domain signature. IPR031157
Gene3D 564 677 114 G3DSA:3.30.230.10 none none IPR014721
Hamap 86 772 687 MF_00054_B none Elongation factor G [fusA]. IPR004540
PANTHER 297 580 284 PTHR23115:SF13 none none none
PANTHER 606 773 168 PTHR23115 none none none
PANTHER 80 268 189 PTHR23115:SF13 none none none
PANTHER 606 773 168 PTHR23115:SF13 none none none
PANTHER 297 580 284 PTHR23115 none none none
PANTHER 80 268 189 PTHR23115 none none none
SUPERFAMILY 344 484 141 SSF50447 none none IPR009000
ProSiteProfiles 88 363 276 PS51722 none Translational (tr)-type guanine nucleotide-binding (G) domain profile. IPR000795
Hamap 76 777 702 MF_03063 "UniPathway:UPA00345" Elongation factor G, chloroplastic. IPR030848
PANTHER 20 44 25 PTHR23115 none none none
SMART 680 768 89 SM00838 none Elongation factor G C-terminus IPR000640
Pfam 484 557 74 PF14492 none Elongation Factor G, domain II IPR009022
SUPERFAMILY 683 771 89 SSF54980 none none IPR009022
Pfam 89 361 273 PF00009 none Elongation factor Tu GTP binding domain none
Gene3D 678 774 97 G3DSA:3.30.70.240 none none IPR000640
Pfam 559 677 119 PF03764 none Elongation factor G, domain IV IPR005517
PRINTS 92 105 14 PR00315 none GTP-binding elongation factor signature IPR000795
PRINTS 174 185 12 PR00315 none GTP-binding elongation factor signature IPR000795
PRINTS 138 146 9 PR00315 none GTP-binding elongation factor signature IPR000795
PRINTS 158 168 11 PR00315 none GTP-binding elongation factor signature IPR000795

0 Localization

4 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2015_nP_3P Qrob_Chr12 12 v_10140_295 v_838_303 16 14,69 18,01 lod 5.1 13.7
Bourran2_2002_QTL17_peak_Bud_burst_A4 Qrob_Chr12 12 s_1CTJ3J_556 s_1CTJ3J_556 0 0 25 lod 2,9 6
Bourran2_2014_nSeqBC_3P Qrob_Chr12 12 s_1EO8V5_710 s_1A2VMU_355 11,04 0 32,58 lod 1,7196 4,7

0 Targeting