Protein : Qrob_P0537990.2 Q. robur
Protein Identifier  ? Qrob_P0537990.2 Organism . Name  Quercus robur
Score  68.2 Score Type  egn
Protein Description  (M=2) K03064 - 26S proteasome regulatory subunit T4 Code Enzyme  EC:3.4.25.1
Gene Prediction Quality  validated Protein length 

Sequence

Length: 448  
Kegg Orthology  K03064
Paste the following link
Lists
This Protein isn't in any lists. Upload a list.

Sequence Feature Displayer

Protein Sequence Displayer

J Browse Displayer

0 Synonyms

4 GO Terms

Identifier Name Description
GO:0005524 ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO:0005737 cytoplasm All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
GO:0016787 hydrolase activity Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.
GO:0030163 protein catabolic process The chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds.

50 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|gmx:100802514 5 359 + 355 Gaps:2 89.47 399 96.08 0.0 26S protease regulatory subunit 10B homolog A-like
blastp_kegg lcl|pvu:PHAVU_009G060700g 5 359 + 355 Gaps:2 89.70 398 96.08 0.0 hypothetical protein
blastp_kegg lcl|gmx:100785863 5 359 + 355 Gaps:2 89.47 399 95.80 0.0 26S protease regulatory subunit 10B homolog A-like
blastp_kegg lcl|cam:101492658 5 359 + 355 Gaps:2 89.70 398 95.80 0.0 26S protease regulatory subunit 10B homolog A-like
blastp_kegg lcl|gmx:100794489 5 359 + 355 Gaps:2 89.70 398 95.52 0.0 26S protease regulatory subunit S10B homolog B-like
blastp_kegg lcl|gmx:100788475 5 359 + 355 Gaps:2 89.70 398 95.52 0.0 26S protease regulatory subunit 10B homolog A-like
blastp_kegg lcl|mdm:103428634 5 359 + 355 Gaps:2 89.47 399 95.80 0.0 26S protease regulatory subunit 10B homolog A
blastp_kegg lcl|cic:CICLE_v10001384mg 5 359 + 355 Gaps:2 89.70 398 95.52 0.0 hypothetical protein
blastp_kegg lcl|cit:102626381 5 359 + 355 Gaps:2 89.70 398 95.52 0.0 26S protease regulatory subunit S10B homolog B-like
blastp_kegg lcl|pda:103709302 5 359 + 355 Gaps:2 89.70 398 96.08 0.0 26S protease regulatory subunit S10B homolog B
blastp_pdb 3h4m_C 85 346 + 262 Gaps:9 88.77 285 56.92 4e-96 mol:protein length:285 Proteasome-activating nucleotidase
blastp_pdb 3h4m_B 85 346 + 262 Gaps:9 88.77 285 56.92 4e-96 mol:protein length:285 Proteasome-activating nucleotidase
blastp_pdb 3h4m_A 85 346 + 262 Gaps:9 88.77 285 56.92 4e-96 mol:protein length:285 Proteasome-activating nucleotidase
blastp_pdb 3cf0_N 106 327 + 222 none 73.75 301 42.79 2e-59 mol:protein length:301 Transitional endoplasmic reticulum ATPase
blastp_pdb 3cf0_M 106 327 + 222 none 73.75 301 42.79 2e-59 mol:protein length:301 Transitional endoplasmic reticulum ATPase
blastp_pdb 3cf0_L 106 327 + 222 none 73.75 301 42.79 2e-59 mol:protein length:301 Transitional endoplasmic reticulum ATPase
blastp_pdb 3cf0_K 106 327 + 222 none 73.75 301 42.79 2e-59 mol:protein length:301 Transitional endoplasmic reticulum ATPase
blastp_pdb 3cf0_J 106 327 + 222 none 73.75 301 42.79 2e-59 mol:protein length:301 Transitional endoplasmic reticulum ATPase
blastp_pdb 3cf0_I 106 327 + 222 none 73.75 301 42.79 2e-59 mol:protein length:301 Transitional endoplasmic reticulum ATPase
blastp_pdb 3cf0_H 106 327 + 222 none 73.75 301 42.79 2e-59 mol:protein length:301 Transitional endoplasmic reticulum ATPase
blastp_uniprot_sprot sp|Q9MAK9|PS10B_ARATH 5 359 + 355 Gaps:2 89.47 399 93.28 0.0 26S protease regulatory subunit S10B homolog B OS Arabidopsis thaliana GN RPT4B PE 1 SV 1
blastp_uniprot_sprot sp|Q9SEI3|PS10A_ARATH 5 359 + 355 Gaps:2 89.47 399 93.00 0.0 26S protease regulatory subunit 10B homolog A OS Arabidopsis thaliana GN RPT4A PE 1 SV 1
blastp_uniprot_sprot sp|P62335|PRS10_SPETR 6 346 + 341 none 87.66 389 80.06 0.0 26S protease regulatory subunit 10B OS Spermophilus tridecemlineatus GN PSMC6 PE 2 SV 1
blastp_uniprot_sprot sp|P62334|PRS10_MOUSE 6 346 + 341 none 87.66 389 80.06 0.0 26S protease regulatory subunit 10B OS Mus musculus GN Psmc6 PE 1 SV 1
blastp_uniprot_sprot sp|P62333|PRS10_HUMAN 6 346 + 341 none 87.66 389 80.06 0.0 26S protease regulatory subunit 10B OS Homo sapiens GN PSMC6 PE 1 SV 1
blastp_uniprot_sprot sp|Q2KIW6|PRS10_BOVIN 6 346 + 341 none 87.66 389 79.77 0.0 26S protease regulatory subunit 10B OS Bos taurus GN PSMC6 PE 2 SV 1
blastp_uniprot_sprot sp|O17071|PRS10_CAEEL 15 346 + 332 none 81.77 406 81.02 0.0 Probable 26S protease regulatory subunit 10B OS Caenorhabditis elegans GN rpt-4 PE 1 SV 2
blastp_uniprot_sprot sp|O74445|PRS10_SCHPO 15 349 + 335 none 86.34 388 77.91 0.0 Probable 26S protease subunit rpt4 OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN rpt4 PE 3 SV 2
blastp_uniprot_sprot sp|Q54PJ1|PRS10_DICDI 8 346 + 339 Gaps:1 86.51 393 77.94 0.0 26S protease regulatory subunit 10B OS Dictyostelium discoideum GN psmC6 PE 1 SV 1
blastp_uniprot_sprot sp|P53549|PRS10_YEAST 7 347 + 341 none 78.03 437 68.62 2e-175 26S protease subunit RPT4 OS Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN RPT4 PE 1 SV 4

10 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Coils 10 31 22 Coil none none none
PANTHER 6 346 341 PTHR23073 none none none
ProSitePatterns 250 268 19 PS00674 none AAA-protein family signature. IPR003960
SUPERFAMILY 107 359 253 SSF52540 none none IPR027417
TIGRFAM 12 347 336 TIGR01242 "Reactome:REACT_11045","Reactome:REACT_13","Reactome:REACT_13635","Reactome:REACT_152","Reactome:REACT_1538","Reactome:REACT_383","Reactome:REACT_578","Reactome:REACT_6185","Reactome:REACT_6850" 26Sp45: 26S proteasome subunit P45 family IPR005937
PANTHER 6 346 341 PTHR23073:SF24 none none none
Gene3D 105 288 184 G3DSA:3.40.50.300 none none IPR027417
Pfam 147 280 134 PF00004 none ATPase family associated with various cellular activities (AAA) IPR003959
SMART 143 282 140 SM00382 none ATPases associated with a variety of cellular activities IPR003593
Gene3D 289 346 58 G3DSA:1.10.8.60 none none none

0 Localization

12 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2003_QTL2_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 87 lod 3,3 8,7
Bourran1_2004_QTL2_peak_Bud_burst_3P Qrob_Chr02 2 s_1AW12F_382 s_1A77MR_223 42 6 64 lod 3,6 9,6
Bourran2_2003_QTL8_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 0 72 lod 4,4 9,9
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 24,87 24,63 26,18 lod 3.8 7
Bourran1_2003_QTL1_peak_Bud_burst_3P Qrob_Chr02 2 s_1AR8KI_1183 s_1B0QB1_473 22 6 41 lod 4,2 11,5
Bourran1_2004_QTL3_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 46 lod 2,9 6,4
Bourran2_2015_nEpiBC_A4 Qrob_Chr07 7 s_1DP9TW_798 v_8128_173 22,61 22,14 22,73 lod 3.1 8.5
Champenoux_2015_nEpis_A4 Qrob_Chr02 2 s_1BAGIZ_823 s_1BN4CB_644 23,06 23,06 23,06 lod 4.9 11
Champenoux_2015_nP_A4 Qrob_Chr02 2 s_1BN4CB_644 v_508_128 23,76 23,06 24,51 lod 2.8 6.2
Champenoux_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 25,35 24,63 26,18 lod 4.0 8.7
Champenoux_2015_nSecLBD_A4 Qrob_Chr02 2 s_1AN4ZM_1665 v_8587_238 18,52 18,89 18,27 lod 3.2 7.4

0 Targeting