Protein : Qrob_P0536690.2 Q. robur
Protein Identifier  ? Qrob_P0536690.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=1) K03355 - anaphase-promoting complex subunit 8 Gene Prediction Quality  validated
Protein length 

Sequence

Length: 578  
Kegg Orthology  K03355
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0005515 protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
GO:0005680 anaphase-promoting complex A ubiquitin ligase complex that degrades mitotic cyclins and anaphase inhibitory protein, thereby triggering sister chromatid separation and exit from mitosis. Substrate recognition by APC occurs through degradation signals, the most common of which is termed the Dbox degradation motif, originally discovered in cyclin B.
GO:0030071 regulation of mitotic metaphase/anaphase transition Any process that modulates the frequency, rate or extent of the onset of anaphase (chromosome movement) in the mitotic cell cycle.

42 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|vvi:100249407 1 577 + 577 none 100.00 577 89.25 0.0 anaphase-promoting complex subunit 8-like
blastp_kegg lcl|pop:POPTR_0012s07670g 1 577 + 577 Gaps:1 100.00 576 87.33 0.0 POPTRDRAFT_834319 anaphase-promoting complex or cyclosome subunit family protein
blastp_kegg lcl|gmx:100811816 1 577 + 577 none 100.00 577 86.83 0.0 anaphase-promoting complex subunit 8-like
blastp_kegg lcl|rcu:RCOM_1512770 1 577 + 577 none 100.00 577 87.00 0.0 cell division cycle putative
blastp_kegg lcl|cam:101510507 1 577 + 577 none 100.00 577 86.31 0.0 anaphase-promoting complex subunit 8-like
blastp_kegg lcl|vvi:100247356 1 577 + 577 none 100.00 577 86.83 0.0 anaphase-promoting complex subunit 8-like
blastp_kegg lcl|pmum:103338285 1 577 + 577 none 100.00 577 87.18 0.0 anaphase-promoting complex subunit 8
blastp_kegg lcl|pper:PRUPE_ppa003407mg 1 577 + 577 none 100.00 577 87.18 0.0 hypothetical protein
blastp_kegg lcl|pvu:PHAVU_002G154200g 1 577 + 577 none 99.48 580 85.79 0.0 hypothetical protein
blastp_kegg lcl|tcc:TCM_011966 1 577 + 577 none 100.00 577 86.83 0.0 Anaphase-promoting complex subunit 8
blastp_pdb 2hyz_A 338 503 + 166 Gaps:4 98.53 136 47.76 1e-14 mol:protein length:136 SYNTHETIC CONSENSUS TPR PROTEIN
blastp_pdb 2fo7_A 338 503 + 166 Gaps:4 98.53 136 47.76 1e-14 mol:protein length:136 SYNTHETIC CONSENSUS TPR PROTEIN
blastp_pdb 1na0_B 327 489 + 163 Gaps:2 95.20 125 50.42 9e-14 mol:protein length:125 designed protein CTPR3
blastp_pdb 1na0_A 327 489 + 163 Gaps:2 95.20 125 50.42 9e-14 mol:protein length:125 designed protein CTPR3
blastp_pdb 3kd7_E 338 489 + 152 Gaps:6 95.20 125 49.58 8e-13 mol:protein length:125 CTPR390
blastp_pdb 3kd7_D 338 489 + 152 Gaps:6 95.20 125 49.58 8e-13 mol:protein length:125 CTPR390
blastp_pdb 3kd7_C 338 489 + 152 Gaps:6 95.20 125 49.58 8e-13 mol:protein length:125 CTPR390
blastp_pdb 3kd7_B 338 489 + 152 Gaps:6 95.20 125 49.58 8e-13 mol:protein length:125 CTPR390
blastp_pdb 3kd7_A 338 489 + 152 Gaps:6 95.20 125 49.58 8e-13 mol:protein length:125 CTPR390
blastp_pdb 2wqh_A 338 467 + 130 Gaps:2 82.40 125 47.57 4e-12 mol:protein length:125 CTPR3Y3
blastp_uniprot_sprot sp|Q9STS3|CDC23_ARATH 1 575 + 575 Gaps:2 99.65 579 79.38 0.0 Anaphase-promoting complex subunit 8 OS Arabidopsis thaliana GN APC8 PE 1 SV 1
blastp_uniprot_sprot sp|A1A4R8|CDC23_BOVIN 81 572 + 492 Gaps:8 82.75 597 47.37 5e-140 Cell division cycle protein 23 homolog OS Bos taurus GN CDC23 PE 2 SV 1
blastp_uniprot_sprot sp|Q8BGZ4|CDC23_MOUSE 81 560 + 480 Gaps:6 80.40 597 48.12 1e-139 Cell division cycle protein 23 homolog OS Mus musculus GN Cdc23 PE 1 SV 2
blastp_uniprot_sprot sp|Q9UJX2|CDC23_HUMAN 67 572 + 506 Gaps:10 84.76 597 46.64 2e-139 Cell division cycle protein 23 homolog OS Homo sapiens GN CDC23 PE 1 SV 3
blastp_uniprot_sprot sp|Q86B11|CDC23_DICDI 8 560 + 553 Gaps:37 84.80 592 48.80 7e-127 Anaphase-promoting complex subunit 8 OS Dictyostelium discoideum GN anapc8 PE 3 SV 1
blastp_uniprot_sprot sp|O94556|APC8_SCHPO 8 562 + 555 Gaps:34 94.69 565 41.87 2e-121 Anaphase-promoting complex subunit 8 OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN cut23 PE 1 SV 2
blastp_uniprot_sprot sp|P16522|CDC23_YEAST 8 561 + 554 Gaps:100 97.44 626 31.64 6e-79 Anaphase-promoting complex subunit CDC23 OS Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN CDC23 PE 1 SV 1
blastp_uniprot_sprot sp|Q8LGU6|CD27B_ARATH 253 553 + 301 Gaps:9 39.25 744 29.79 9e-31 Cell division cycle protein 27 homolog B OS Arabidopsis thaliana GN CDC27B PE 1 SV 1
blastp_uniprot_sprot sp|P17885|BIMA_EMENI 235 498 + 264 Gaps:21 34.86 806 29.89 2e-29 Protein bimA OS Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN bimA PE 2 SV 1
blastp_uniprot_sprot sp|A7Z061|CDC27_BOVIN 268 522 + 255 Gaps:11 29.58 825 31.97 2e-29 Cell division cycle protein 27 homolog OS Bos taurus GN CDC27 PE 2 SV 1

29 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
ProSiteProfiles 269 302 34 PS50005 none TPR repeat profile. IPR019734
PANTHER 90 565 476 PTHR12558:SF10 none none none
PANTHER 8 49 42 PTHR12558:SF10 none none none
PANTHER 90 565 476 PTHR12558 none none none
PANTHER 8 49 42 PTHR12558 none none none
Gene3D 274 545 272 G3DSA:1.25.40.10 none none IPR011990
SUPERFAMILY 337 503 167 SSF48452 none none none
Pfam 3 158 156 PF04049 "UniPathway:UPA00143" Anaphase promoting complex subunit 8 / Cdc23 IPR007192
Pfam 338 370 33 PF00515 none Tetratricopeptide repeat IPR001440
Pfam 517 541 25 PF00515 none Tetratricopeptide repeat IPR001440
Coils 151 172 22 Coil none none none
SUPERFAMILY 333 374 42 SSF48452 none none none
SUPERFAMILY 267 298 32 SSF48452 none none none
SUPERFAMILY 178 214 37 SSF48452 none none none
ProSiteProfiles 337 370 34 PS50005 none TPR repeat profile. IPR019734
Pfam 373 419 47 PF13414 none TPR repeat none
ProSiteProfiles 405 438 34 PS50005 none TPR repeat profile. IPR019734
ProSiteProfiles 516 549 34 PS50005 none TPR repeat profile. IPR019734
ProSiteProfiles 337 549 213 PS50293 none TPR repeat region circular profile. IPR013026
Pfam 475 503 29 PF07719 none Tetratricopeptide repeat IPR013105
SMART 475 508 34 SM00028 none Tetratricopeptide repeats IPR019734
SMART 405 438 34 SM00028 none Tetratricopeptide repeats IPR019734
SMART 516 549 34 SM00028 none Tetratricopeptide repeats IPR019734
SMART 439 474 36 SM00028 none Tetratricopeptide repeats IPR019734
SMART 269 302 34 SM00028 none Tetratricopeptide repeats IPR019734
SMART 371 404 34 SM00028 none Tetratricopeptide repeats IPR019734
SMART 337 370 34 SM00028 none Tetratricopeptide repeats IPR019734
ProSiteProfiles 371 404 34 PS50005 none TPR repeat profile. IPR019734
ProSiteProfiles 475 508 34 PS50005 none TPR repeat profile. IPR019734

0 Localization

7 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2004_QTL5_peak_Bud_burst_A4 Qrob_Chr10 10 s_1C8OKQ_688 v_12844_707 25,6 13,9 39,9 lod 2,7 6,1
Bourran2_2002_QTL13_peak_Bud_burst_3P Qrob_Chr10 10 s_1B1AG7_637 s_1A3A1N_709 19,44 0 49,44 lod 3 5,6
Bourran2_2002_QTL15_peak_Bud_burst_A4 Qrob_Chr10 10 v_7579_71 s_1ATZMJ_189 23,94 0 43,64 lod 3,7 5,4
Bourran2_2014_vSeqBC_3P Qrob_Chr10 10 s_1A6CK6_610 v_7092_29 4,28 0 23,27 lod 2,8619 7
Bourran2_2014_vSeqBC_A4 Qrob_Chr10 10 s_1BAM4E_1326 s_1C0HD0_1012 36,88 7,71 46,03 lod 2,6164 7,3
Champenoux_2015_nPriLBD_3P Qrob_Chr10 10 v_15000_157 v_15000_310 15,68 15,9 15,91 lod 2.4 5.5
PM_1999_QTL16_peak_Bud_burst_3P Qrob_Chr10 10 s_1B6YNI_505 s_1A1ZO_1322 7,48 0 31,48 lod 4 7,1

0 Targeting