Protein : Qrob_P0536270.2 Q. robur
Protein Identifier  ? Qrob_P0536270.2 Organism . Name  Quercus robur
Score  70.0 Score Type  egn
Protein Description  (M=1) PTHR32409:SF3 - MITOCHONDRIAL IMPORT RECEPTOR SUBUNIT TOM20-1-RELATED (PTHR32409:SF3) Gene Prediction Quality  validated
Protein length 

Sequence

Length: 179  
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0005515 protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
GO:0005742 mitochondrial outer membrane translocase complex A large complex of the mitochondrial outer membrane that mediates transport of proteins into all mitochondrial compartments.
GO:0045040 protein import into mitochondrial outer membrane The process comprising the insertion of proteins from outside the organelle into the mitochondrial outer membrane, mediated by large outer membrane translocase complexes.

19 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pmum:103322065 1 156 + 156 none 77.23 202 78.21 2e-85 mitochondrial import receptor subunit TOM20
blastp_kegg lcl|pper:PRUPE_ppa011665mg 1 156 + 156 none 77.23 202 78.21 2e-85 hypothetical protein
blastp_kegg lcl|mdm:103414471 1 163 + 163 Gaps:3 92.74 179 75.30 2e-84 mitochondrial import receptor subunit TOM20-like
blastp_kegg lcl|mdm:103416576 1 155 + 155 Gaps:3 76.70 206 77.85 6e-84 mitochondrial import receptor subunit TOM20-like
blastp_kegg lcl|mdm:103403157 1 155 + 155 Gaps:3 76.70 206 77.85 6e-84 mitochondrial import receptor subunit TOM20-like
blastp_kegg lcl|pxb:103929941 1 155 + 155 Gaps:3 76.70 206 77.85 2e-83 mitochondrial import receptor subunit TOM20-like
blastp_kegg lcl|pxb:103961468 1 155 + 155 Gaps:3 76.70 206 77.85 2e-83 mitochondrial import receptor subunit TOM20-like
blastp_kegg lcl|mdm:103452137 1 155 + 155 Gaps:3 76.70 206 75.95 7e-81 mitochondrial import receptor subunit TOM20-like
blastp_kegg lcl|csv:101219886 1 159 + 159 Gaps:3 79.41 204 72.84 2e-80 mitochondrial import receptor subunit TOM20-like
blastp_kegg lcl|cmo:103487773 1 159 + 159 Gaps:3 79.41 204 71.60 5e-79 mitochondrial import receptor subunit TOM20-like
blastp_pdb 1zu2_A 4 145 + 142 none 89.87 158 61.97 2e-56 mol:protein length:158 Mitochondrial import receptor subunit TOM20-3
blastp_uniprot_sprot sp|P92792|TOM20_SOLTU 5 154 + 150 none 73.53 204 71.33 6e-75 Mitochondrial import receptor subunit TOM20 OS Solanum tuberosum GN TOM20 PE 1 SV 1
blastp_uniprot_sprot sp|P82873|TO202_ARATH 1 150 + 150 none 71.43 210 58.67 7e-59 Mitochondrial import receptor subunit TOM20-2 OS Arabidopsis thaliana GN TOM20-2 PE 1 SV 2
blastp_uniprot_sprot sp|P82874|TO203_ARATH 4 151 + 148 none 73.27 202 60.81 4e-57 Mitochondrial import receptor subunit TOM20-3 OS Arabidopsis thaliana GN TOM20-3 PE 1 SV 1
blastp_uniprot_sprot sp|P82872|TO201_ARATH 8 164 + 157 Gaps:8 86.70 188 52.76 2e-48 Mitochondrial import receptor subunit TOM20-1 OS Arabidopsis thaliana GN TOM20-1 PE 1 SV 1
blastp_uniprot_sprot sp|Q5JJI4|TOM20_ORYSJ 4 143 + 140 none 69.31 202 55.71 3e-47 Probable mitochondrial import receptor subunit TOM20 OS Oryza sativa subsp. japonica GN TOM20 PE 2 SV 1
blastp_uniprot_sprot sp|A2WYG9|TOM20_ORYSI 4 143 + 140 none 69.65 201 55.71 4e-47 Probable mitochondrial import receptor subunit TOM20 OS Oryza sativa subsp. indica GN TOM20 PE 2 SV 2
blastp_uniprot_sprot sp|P82805|TO204_ARATH 5 158 + 154 Gaps:16 75.94 187 57.04 8e-44 Mitochondrial import receptor subunit TOM20-4 OS Arabidopsis thaliana GN TOM20-4 PE 1 SV 1
rpsblast_cdd gnl|CDD|191555 8 163 + 156 none 83.87 186 66.03 2e-62 pfam06552 TOM20_plant Plant specific mitochondrial import receptor subunit TOM20. This family consists of several plant specific mitochondrial import receptor subunit TOM20 (translocase of outer membrane 20 kDa subunit) proteins. Most mitochondrial proteins are encoded by the nuclear genome and are synthesised in the cytosol. TOM20 is a general import receptor that binds to mitochondrial pre-sequences in the early step of protein import into the mitochondria.

6 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 8 163 156 PF06552 none Plant specific mitochondrial import receptor subunit TOM20 none
SUPERFAMILY 14 127 114 SSF48452 none none none
ProDom 5 154 150 PD102047 none MEMBRANE SUBUNIT OUTER RECEPTOR IMPORT TRANSLOCASE MITOCHONDRIAL TRANSMEMBRANE MITOCHONDRION DIRECT none
PANTHER 2 159 158 PTHR32409:SF3 none none IPR010547
Gene3D 14 130 117 G3DSA:1.25.40.10 none none IPR011990
PANTHER 2 159 158 PTHR32409 none none none

0 Localization

2 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD_3P Qrob_Chr03 3 s_1ET7H8_604 s_1BYNB5_834 23,73 0 46,72 lod 1,7573 3,8
PM_1999_QTL14_peak_Bud_burst_3P Qrob_Chr03 3 s_2F0SI1_756 v_6056_735 11,78 3,78 50,78 lod 2,5 4,5

0 Targeting