Protein : Qrob_P0535760.2 Q. robur
Protein Identifier  ? Qrob_P0535760.2 Organism . Name  Quercus robur
Score  95.1 Score Type  egn
Protein Description  (M=2) K11279 - nucleosome assembly protein 1-like 1 Gene Prediction Quality  validated
Protein length 

Sequence

Length: 428  
Kegg Orthology  K11279
Paste the following link
Lists
This Protein isn't in any lists. Upload a list.

Sequence Feature Displayer

Protein Sequence Displayer

J Browse Displayer

0 Synonyms

2 GO Terms

Identifier Name Description
GO:0005634 nucleus A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
GO:0006334 nucleosome assembly The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA.

36 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|vvi:100267878 1 337 + 337 Gaps:35 83.70 368 86.36 3e-175 nucleosome assembly protein 1-like 1-like
blastp_kegg lcl|mdm:103453570 1 334 + 334 Gaps:31 80.37 377 77.56 1e-166 NAP nucleosome assembly protein 1 1
blastp_kegg lcl|fve:101309068 1 334 + 334 Gaps:39 81.96 377 77.99 3e-164 nucleosome assembly protein 1-like 1-like
blastp_kegg lcl|gmx:100785314 1 337 + 337 Gaps:34 82.43 370 85.25 1e-160 putative nucleosome assembly protein C364.06-like
blastp_kegg lcl|sot:102591576 1 328 + 328 Gaps:31 80.81 370 82.27 3e-160 nucleosome assembly protein 1 2-like
blastp_kegg lcl|brp:103849254 1 329 + 329 Gaps:30 77.66 385 80.60 4e-160 nucleosome assembly protein 1 2-like
blastp_kegg lcl|gmx:100783783 1 329 + 329 Gaps:33 82.45 359 82.09 4e-160 nucleosome assembly protein 1 3-like
blastp_kegg lcl|vvi:100261732 1 330 + 330 Gaps:37 80.58 381 84.04 1e-158 nucleosome assembly protein 1-like 1-like
blastp_kegg lcl|pper:PRUPE_ppa006998mg 1 330 + 330 Gaps:38 79.79 386 77.60 4e-158 hypothetical protein
blastp_kegg lcl|csv:101224619 1 330 + 330 Gaps:31 79.73 375 87.63 6e-158 nucleosome assembly protein 1-like 1-like
blastp_pdb 3gyw_A 90 326 + 237 Gaps:25 93.17 249 37.50 5e-38 mol:protein length:249 Nucleosome assembly protein 1 putative
blastp_pdb 3gyv_A 90 326 + 237 Gaps:25 93.17 249 37.50 5e-38 mol:protein length:249 Nucleosome assembly protein 1 putative
blastp_pdb 3hfd_A 90 341 + 252 Gaps:25 89.49 276 36.44 9e-38 mol:protein length:276 Nucleosome assembly protein 1
blastp_pdb 3fs3_A 90 332 + 243 Gaps:27 66.30 359 37.39 2e-37 mol:protein length:359 Nucleosome assembly protein 1 putative
blastp_pdb 2ayu_A 19 326 + 308 Gaps:59 72.66 417 33.00 1e-32 mol:protein length:417 Nucleosome assembly protein
blastp_pdb 2z2r_B 83 329 + 247 Gaps:29 93.15 292 33.82 4e-32 mol:protein length:292 Nucleosome assembly protein
blastp_pdb 2z2r_A 83 329 + 247 Gaps:29 93.15 292 33.82 4e-32 mol:protein length:292 Nucleosome assembly protein
blastp_pdb 2e50_Q 96 324 + 229 Gaps:53 79.11 225 36.52 2e-18 mol:protein length:225 Protein SET
blastp_pdb 2e50_P 96 324 + 229 Gaps:53 79.11 225 36.52 2e-18 mol:protein length:225 Protein SET
blastp_pdb 2e50_B 96 324 + 229 Gaps:53 79.11 225 36.52 2e-18 mol:protein length:225 Protein SET
blastp_uniprot_sprot sp|Q9ZUP3|NAP1B_ARATH 1 329 + 329 Gaps:30 78.89 379 81.94 2e-158 Nucleosome assembly protein 1 2 OS Arabidopsis thaliana GN NAP1 2 PE 1 SV 1
blastp_uniprot_sprot sp|Q70Z18|NAP1B_TOBAC 1 328 + 328 Gaps:31 79.31 377 82.27 7e-153 Nucleosome assembly protein 1 2 OS Nicotiana tabacum GN NAP1 2 PE 1 SV 1
blastp_uniprot_sprot sp|Q70Z17|NAP1C_TOBAC 1 330 + 330 Gaps:31 79.84 377 82.39 7e-152 Nucleosome assembly protein 1 3 OS Nicotiana tabacum GN NAP1 3 PE 1 SV 1
blastp_uniprot_sprot sp|Q94K07|NAP1C_ARATH 1 330 + 330 Gaps:30 80.21 374 79.33 7e-150 Nucleosome assembly protein 1 3 OS Arabidopsis thaliana GN NAP1 3 PE 1 SV 1
blastp_uniprot_sprot sp|B8AW64|NAP1B_ORYSI 1 337 + 337 Gaps:37 85.71 364 74.68 2e-145 Nucleosome assembly protein 1 2 OS Oryza sativa subsp. indica GN NAP1 2 PE 1 SV 1
blastp_uniprot_sprot sp|Q53WK4|NAP1B_ORYSJ 1 337 + 337 Gaps:37 85.71 364 74.68 2e-145 Nucleosome assembly protein 1 2 OS Oryza sativa subsp. japonica GN NAP1 2 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SZI2|NAP1A_ARATH 1 330 + 330 Gaps:31 80.91 372 76.74 2e-144 Nucleosome assembly protein 1 1 OS Arabidopsis thaliana GN NAP1 1 PE 1 SV 1
blastp_uniprot_sprot sp|Q70Z19|NAP1A_TOBAC 1 328 + 328 Gaps:31 79.95 374 79.26 5e-144 Nucleosome assembly protein 1 1 OS Nicotiana tabacum GN NAP1 1 PE 1 SV 1
blastp_uniprot_sprot sp|Q5VND6|NAP1A_ORYSJ 1 330 + 330 Gaps:38 81.48 378 77.27 1e-143 Nucleosome assembly protein 1 1 OS Oryza sativa subsp. japonica GN NAP1 1 PE 2 SV 1
blastp_uniprot_sprot sp|B8B2R4|NAP1A_ORYSI 1 330 + 330 Gaps:38 81.70 377 77.27 5e-143 Nucleosome assembly protein 1 1 OS Oryza sativa subsp. indica GN NAP1 1 PE 1 SV 1

7 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 12 62 51 PTHR11875 none none IPR002164
PANTHER 93 390 298 PTHR11875 none none IPR002164
Coils 134 155 22 Coil none none none
PANTHER 12 62 51 PTHR11875:SF7 none none none
PANTHER 93 390 298 PTHR11875:SF7 none none none
SUPERFAMILY 93 326 234 SSF143113 none none none
Pfam 94 328 235 PF00956 none Nucleosome assembly protein (NAP) IPR002164

0 Localization

8 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2003_QTL2_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 87 lod 3,3 8,7
Bourran2_2004_QTL9_peak_Bud_burst_3P Qrob_Chr02 2 s_1C34E9_788 v_12238_322 50 25 75 lod 4,4 10,1
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL2_d13Cf Qrob_Chr02 2 s_1AQA4Z_1644 s_1AK5QX_947 53.67 14,01 79,68 lod 5.6594 0.03
Bourran1_2004_QTL2_peak_Bud_burst_3P Qrob_Chr02 2 s_1AW12F_382 s_1A77MR_223 42 6 64 lod 3,6 9,6
Bourran2_2002_QTL9_peak_Bud_burst_A4 Qrob_Chr02 2 s_1BFNDA_375 s_1A3VA1_2139 32,5 17 62 lod 3,1 4,2
Bourran2_2003_QTL8_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 0 72 lod 4,4 9,9
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL6_d13Cf Qrob_Chr02 2 s_1AEP21_172 v_6048_204 46.33 22,5 65,23 lod 4.972 0.03

0 Targeting