Protein : Qrob_P0531960.2 Q. robur
Protein Identifier  ? Qrob_P0531960.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=2) PF08263//PF12799 - Leucine rich repeat N-terminal domain // Leucine Rich repeats (2 copies) Code Enzyme  EC:2.7.11.1, EC:2.7.10.1
Gene Prediction Quality  validated Protein length 

Sequence

Length: 211  
Paste the following link
Lists
This Protein isn't in any lists. Upload a list.

Sequence Feature Displayer

Protein Sequence Displayer

J Browse Displayer

0 Synonyms

1 GO Terms

Identifier Name Description
GO:0019199 transmembrane receptor protein kinase activity Combining with a signal and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity by catalysis of the reaction: a protein + ATP = a phosphoprotein + ADP.

31 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pper:PRUPE_ppb009520mg 1 210 + 210 Gaps:2 100.00 212 83.96 3e-127 hypothetical protein
blastp_kegg lcl|pmum:103335195 1 210 + 210 Gaps:2 100.00 212 83.49 8e-127 somatic embryogenesis receptor kinase 1-like
blastp_kegg lcl|pop:POPTR_0001s30370g 1 210 + 210 Gaps:2 100.00 212 82.08 2e-126 POPTRDRAFT_707404 putative leucine-rich repeat family protein
blastp_kegg lcl|fve:101310474 12 210 + 199 Gaps:2 92.63 217 85.57 6e-123 somatic embryogenesis receptor kinase 2-like
blastp_kegg lcl|rcu:RCOM_0174740 23 210 + 188 Gaps:2 89.62 212 90.00 6e-123 serine-threonine protein kinase plant-type putative
blastp_kegg lcl|cit:102614580 7 210 + 204 Gaps:2 98.56 209 81.55 2e-121 somatic embryogenesis receptor kinase 1-like
blastp_kegg lcl|pxb:103939394 1 210 + 210 Gaps:2 100.00 212 82.08 3e-121 somatic embryogenesis receptor kinase 2-like
blastp_kegg lcl|pxb:103939389 1 210 + 210 Gaps:2 100.00 212 82.08 3e-121 somatic embryogenesis receptor kinase 2-like
blastp_kegg lcl|mdm:103430145 1 210 + 210 Gaps:2 89.45 237 82.08 6e-121 somatic embryogenesis receptor kinase 2-like
blastp_kegg lcl|pxb:103928108 1 210 + 210 Gaps:2 100.00 212 80.19 3e-120 somatic embryogenesis receptor kinase 2-like
blastp_pdb 3rj0_A 66 208 + 143 Gaps:26 55.05 772 40.47 5e-16 mol:protein length:772 Protein BRASSINOSTEROID INSENSITIVE 1
blastp_pdb 3riz_A 66 208 + 143 Gaps:26 55.05 772 40.47 5e-16 mol:protein length:772 Protein BRASSINOSTEROID INSENSITIVE 1
blastp_pdb 3rgz_A 66 208 + 143 Gaps:26 55.34 768 40.47 6e-16 mol:protein length:768 Protein BRASSINOSTEROID INSENSITIVE 1
blastp_pdb 3rgx_A 66 208 + 143 Gaps:26 55.34 768 40.47 6e-16 mol:protein length:768 Protein BRASSINOSTEROID INSENSITIVE 1
blastp_pdb 1ogq_A 26 197 + 172 Gaps:88 94.57 313 33.45 4e-11 mol:protein length:313 POLYGALACTURONASE INHIBITING PROTEIN
blastp_uniprot_sprot sp|Q94AG2|SERK1_ARATH 5 198 + 194 Gaps:8 32.32 625 59.41 4e-65 Somatic embryogenesis receptor kinase 1 OS Arabidopsis thaliana GN SERK1 PE 1 SV 2
blastp_uniprot_sprot sp|Q9XIC7|SERK2_ARATH 22 198 + 177 Gaps:3 28.66 628 61.67 5e-64 Somatic embryogenesis receptor kinase 2 OS Arabidopsis thaliana GN SERK2 PE 1 SV 1
blastp_uniprot_sprot sp|Q94F62|BAK1_ARATH 10 194 + 185 Gaps:2 30.41 615 55.61 4e-61 BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 OS Arabidopsis thaliana GN BAK1 PE 1 SV 2
blastp_uniprot_sprot sp|Q9SKG5|SERK4_ARATH 24 195 + 172 Gaps:6 28.39 620 60.23 9e-57 Somatic embryogenesis receptor kinase 4 OS Arabidopsis thaliana GN SERK4 PE 1 SV 2
blastp_uniprot_sprot sp|Q8LPS5|SERK5_ARATH 9 195 + 187 Gaps:6 31.78 601 51.83 1e-52 Somatic embryogenesis receptor kinase 5 OS Arabidopsis thaliana GN SERK5 PE 1 SV 2
blastp_uniprot_sprot sp|Q8VYT3|Y4052_ARATH 6 190 + 185 Gaps:11 27.47 648 43.82 4e-34 Probable LRR receptor-like serine/threonine-protein kinase At4g30520 OS Arabidopsis thaliana GN At4g30520 PE 2 SV 1
blastp_uniprot_sprot sp|Q9LFS4|NIK1_ARATH 23 177 + 155 Gaps:2 24.61 638 45.22 2e-33 Protein NSP-INTERACTING KINASE 1 OS Arabidopsis thaliana GN NIK1 PE 1 SV 1
blastp_uniprot_sprot sp|Q0WVM4|Y2239_ARATH 1 190 + 190 Gaps:11 29.81 634 39.15 9e-33 Probable LRR receptor-like serine/threonine-protein kinase At2g23950 OS Arabidopsis thaliana GN At2g23950 PE 2 SV 1
blastp_uniprot_sprot sp|Q8RY65|NIK2_ARATH 23 177 + 155 Gaps:3 24.57 635 44.23 2e-32 Protein NSP-INTERACTING KINASE 2 OS Arabidopsis thaliana GN NIK2 PE 1 SV 1
blastp_uniprot_sprot sp|C0LGT1|Y5129_ARATH 1 196 + 196 Gaps:6 32.30 613 39.90 2e-28 Probable LRR receptor-like serine/threonine-protein kinase At5g10290 OS Arabidopsis thaliana GN At5g10290 PE 1 SV 1
rpsblast_cdd gnl|CDD|177728 9 209 + 201 Gaps:73 62.60 968 47.52 1e-20 PLN00113 PLN00113 leucine-rich repeat receptor-like protein kinase Provisional.
rpsblast_cdd gnl|CDD|178695 26 174 + 149 Gaps:9 25.36 623 36.08 2e-16 PLN03150 PLN03150 hypothetical protein Provisional.
rpsblast_kog gnl|CDD|35752 71 201 + 131 Gaps:6 17.59 722 33.86 2e-07 KOG0532 KOG0532 KOG0532 Leucine-rich repeat (LRR) protein contains calponin homology domain [Cytoskeleton].
rpsblast_kog gnl|CDD|35693 82 172 + 91 Gaps:5 15.93 565 35.56 3e-07 KOG0472 KOG0472 KOG0472 Leucine-rich repeat protein [Function unknown].
rpsblast_kog gnl|CDD|39857 58 175 + 118 Gaps:6 13.72 889 27.05 4e-07 KOG4658 KOG4658 KOG4658 Apoptotic ATPase [Signal transduction mechanisms].

11 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 1 22 22 SIGNAL_PEPTIDE none Signal peptide region none
Phobius 23 210 188 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 18 22 5 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
PANTHER 1 201 201 PTHR24420 none none none
SUPERFAMILY 23 198 176 SSF52058 none none none
Pfam 24 63 40 PF08263 none Leucine rich repeat N-terminal domain IPR013210
Phobius 1 3 3 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
PANTHER 1 201 201 PTHR24420:SF727 none none IPR031048
Phobius 4 17 14 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
Gene3D 25 186 162 G3DSA:3.80.10.10 none none none
Pfam 136 173 38 PF12799 none Leucine Rich repeats (2 copies) IPR025875

3 Localization

Analysis Start End Length
SignalP_GRAM_POSITIVE 1 22 21
SignalP_EUK 1 22 21
SignalP_GRAM_NEGATIVE 1 22 21

6 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpis_3P Qrob_Chr12 12 s_1AOES6_1466 s_1B0DDG_1094 28,97 28,55 30,1 lod 3.6 8.4
Champenoux_2015_nEpis_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,53 25,47 27,72 lod 4.4 8.9
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2002_QTL16_peak_Bud_burst_A4 Qrob_Chr11 11 s_A9OIA_166 s_1C6WBF_114 21,23 2,83 42,83 lod 5,1 7,2
Bourran2_2015_nSeqBC_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,06 25,47 27,72 lod 3.6 7.1
Champenoux_2015_nSecLBD_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 25,78 25,47 27,72 lod 6.3 16.6

0 Targeting