Protein : Qrob_P0530980.2 Q. robur
Protein Identifier  ? Qrob_P0530980.2 Organism . Name  Quercus robur
Score  99.1 Score Type  egn
Protein Description  (M=1) PTHR10314:SF3 - TRYPTOPHAN SYNTHASE BETA CHAIN Code Enzyme  EC:4.2.1.20
Gene Prediction Quality  validated Protein length 

Sequence

Length: 481  
Kegg Orthology  K01696
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0004834 tryptophan synthase activity Catalysis of the reaction: L-serine + (1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate = L-tryptophan + glyceraldehyde 3-phosphate + H2O.
GO:0006568 tryptophan metabolic process The chemical reactions and pathways involving tryptophan, the chiral amino acid 2-amino-3-(1H-indol-3-yl)propanoic acid.
GO:0000162 tryptophan biosynthetic process The chemical reactions and pathways resulting in the formation of tryptophan, the chiral amino acid 2-amino-3-(1H-indol-3-yl)propanoic acid; tryptophan is synthesized from chorismate via anthranilate.

42 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|vvi:100250414 1 463 + 463 Gaps:4 96.23 477 74.07 0.0 tryptophan synthase beta chain 2 chloroplastic-like
blastp_kegg lcl|tcc:TCM_030179 1 470 + 470 Gaps:8 99.78 463 73.16 0.0 Pyridoxal-5\'-phosphate-dependent enzyme family protein isoform 1
blastp_kegg lcl|cic:CICLE_v10015207mg 50 467 + 418 Gaps:7 92.70 452 79.24 0.0 hypothetical protein
blastp_kegg lcl|rcu:RCOM_0905390 1 466 + 466 Gaps:22 98.92 463 72.49 0.0 tryptophan synthase beta chain putative (EC:1.3.1.74)
blastp_kegg lcl|pop:POPTR_0011s00530g 3 466 + 464 Gaps:27 98.26 461 71.30 0.0 POPTRDRAFT_1093217 hypothetical protein
blastp_kegg lcl|cit:102630901 50 467 + 418 Gaps:7 90.69 462 77.80 0.0 tryptophan synthase beta chain 2 chloroplastic-like
blastp_kegg lcl|csv:101218187 1 465 + 465 Gaps:27 98.90 455 70.22 0.0 tryptophan synthase beta chain 2 chloroplastic-like
blastp_kegg lcl|csv:101208651 1 465 + 465 Gaps:27 98.90 455 70.22 0.0 tryptophan synthase beta chain 2 chloroplastic-like
blastp_kegg lcl|cmo:103485497 89 465 + 377 Gaps:1 82.64 455 78.19 0.0 tryptophan synthase beta chain 1-like
blastp_kegg lcl|sot:102581209 80 465 + 386 none 84.10 459 75.39 0.0 tryptophan synthase beta chain 2 chloroplastic-like
blastp_pdb 1wdw_L 81 463 + 383 Gaps:9 98.70 385 54.74 5e-144 mol:protein length:385 Tryptophan synthase beta chain 1
blastp_pdb 1wdw_J 81 463 + 383 Gaps:9 98.70 385 54.74 5e-144 mol:protein length:385 Tryptophan synthase beta chain 1
blastp_pdb 1wdw_H 81 463 + 383 Gaps:9 98.70 385 54.74 5e-144 mol:protein length:385 Tryptophan synthase beta chain 1
blastp_pdb 1wdw_F 81 463 + 383 Gaps:9 98.70 385 54.74 5e-144 mol:protein length:385 Tryptophan synthase beta chain 1
blastp_pdb 1wdw_D 81 463 + 383 Gaps:9 98.70 385 54.74 5e-144 mol:protein length:385 Tryptophan synthase beta chain 1
blastp_pdb 1wdw_B 81 463 + 383 Gaps:9 98.70 385 54.74 5e-144 mol:protein length:385 Tryptophan synthase beta chain 1
blastp_pdb 1v8z_D 81 463 + 383 Gaps:9 97.94 388 54.74 9e-144 mol:protein length:388 Tryptophan synthase beta chain 1
blastp_pdb 1v8z_C 81 463 + 383 Gaps:9 97.94 388 54.74 9e-144 mol:protein length:388 Tryptophan synthase beta chain 1
blastp_pdb 1v8z_B 81 463 + 383 Gaps:9 97.94 388 54.74 9e-144 mol:protein length:388 Tryptophan synthase beta chain 1
blastp_pdb 1v8z_A 81 463 + 383 Gaps:9 97.94 388 54.74 9e-144 mol:protein length:388 Tryptophan synthase beta chain 1
blastp_uniprot_sprot sp|O50046|TRPB_CAMAC 73 465 + 393 Gaps:4 84.76 466 67.85 0.0 Tryptophan synthase beta chain 2 chloroplastic OS Camptotheca acuminata GN TSB PE 2 SV 1
blastp_uniprot_sprot sp|P25269|TRBP2_ARATH 73 465 + 393 Gaps:4 83.16 475 66.33 0.0 Tryptophan synthase beta chain 2 chloroplastic OS Arabidopsis thaliana GN TSB2 PE 2 SV 2
blastp_uniprot_sprot sp|P14671|TRPB1_ARATH 73 465 + 393 Gaps:4 84.04 470 65.57 0.0 Tryptophan synthase beta chain 1 chloroplastic OS Arabidopsis thaliana GN TSB1 PE 2 SV 1
blastp_uniprot_sprot sp|P43284|TRPB2_MAIZE 73 458 + 386 Gaps:4 87.58 443 66.24 0.0 Tryptophan synthase beta chain 2 chloroplastic (Fragment) OS Zea mays GN TSB2 PE 2 SV 1
blastp_uniprot_sprot sp|P43283|TRPB1_MAIZE 82 458 + 377 Gaps:4 97.43 389 68.07 0.0 Tryptophan synthase beta chain 1 (Fragment) OS Zea mays GN TSB1 PE 2 SV 1
blastp_uniprot_sprot sp|Q3MBV3|TRPB_ANAVT 78 462 + 385 Gaps:4 93.70 413 61.76 0.0 Tryptophan synthase beta chain OS Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN trpB PE 3 SV 1
blastp_uniprot_sprot sp|Q8YQM6|TRPB2_NOSS1 78 462 + 385 Gaps:4 93.70 413 61.76 0.0 Tryptophan synthase beta chain 2 OS Nostoc sp. (strain PCC 7120 / UTEX 2576) GN trpB2 PE 3 SV 1
blastp_uniprot_sprot sp|Q8DG49|TRPB_THEEB 74 462 + 389 Gaps:5 95.12 410 62.05 0.0 Tryptophan synthase beta chain OS Thermosynechococcus elongatus (strain BP-1) GN trpB PE 3 SV 1
blastp_uniprot_sprot sp|Q8YZP7|TRPB1_NOSS1 74 462 + 389 Gaps:4 95.60 409 61.38 2e-179 Tryptophan synthase beta chain 1 OS Nostoc sp. (strain PCC 7120 / UTEX 2576) GN trpB1 PE 3 SV 1
blastp_uniprot_sprot sp|Q118P8|TRPB_TRIEI 70 462 + 393 Gaps:4 96.58 409 60.25 7e-177 Tryptophan synthase beta chain OS Trichodesmium erythraeum (strain IMS101) GN trpB PE 3 SV 1

10 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SUPERFAMILY 78 462 385 SSF53686 none none IPR001926
TIGRFAM 79 465 387 TIGR00263 "KEGG:00260+4.2.1.20","KEGG:00400+4.2.1.20","UniPathway:UPA00035" trpB: tryptophan synthase, beta subunit IPR006654
PANTHER 78 473 396 PTHR10314 none none none
Gene3D 253 463 211 G3DSA:3.40.50.1100 none none none
PANTHER 78 473 396 PTHR10314:SF3 "KEGG:00260+4.2.1.20","KEGG:00400+4.2.1.20","UniPathway:UPA00035";signature_desc=TRYPTOPHAN SYNTHASE BETA CHAIN none IPR006654
Gene3D 177 252 76 G3DSA:3.40.50.1100 none none none
PIRSF 67 472 406 PIRSF001413 "KEGG:00260+4.2.1.20","KEGG:00400+4.2.1.20","UniPathway:UPA00035" none IPR023026
ProSitePatterns 159 173 15 PS00168 "KEGG:00260+4.2.1.20","KEGG:00400+4.2.1.20","UniPathway:UPA00035" Tryptophan synthase beta chain pyridoxal-phosphate attachment site. IPR006653
Pfam 127 449 323 PF00291 none Pyridoxal-phosphate dependent enzyme IPR001926
Hamap 74 466 393 MF_00133 "KEGG:00260+4.2.1.20","KEGG:00400+4.2.1.20","UniPathway:UPA00035" Tryptophan synthase beta chain [trpB]. IPR023026

0 Localization

0 Qtllist

0 Targeting