Protein : Qrob_P0530720.2 Q. robur
Protein Identifier  ? Qrob_P0530720.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=2) PTHR31042:SF4 - CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN (PTHR31042:SF4) Gene Prediction Quality  validated
Protein length 

Sequence

Length: 364  
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0016020 membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
GO:0008375 acetylglucosaminyltransferase activity Catalysis of the transfer of an N-acetylglucosaminyl residue from UDP-N-acetyl-glucosamine to a sugar.

11 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pvu:PHAVU_005G118300g 1 363 + 363 Gaps:10 100.00 365 72.60 0.0 hypothetical protein
blastp_kegg lcl|cam:101490206 1 363 + 363 Gaps:13 100.00 364 73.35 0.0 uncharacterized LOC101490206
blastp_kegg lcl|gmx:100819878 1 363 + 363 Gaps:8 100.00 365 69.86 0.0 uncharacterized LOC100819878
blastp_kegg lcl|pmum:103329311 23 363 + 341 Gaps:10 93.78 370 74.06 0.0 uncharacterized LOC103329311
blastp_kegg lcl|pop:POPTR_0001s22290g 1 363 + 363 Gaps:15 92.08 404 69.35 0.0 POPTRDRAFT_1067745 hypothetical protein
blastp_kegg lcl|pxb:103928993 23 363 + 341 Gaps:9 93.80 371 73.28 6e-180 uncharacterized LOC103928993
blastp_kegg lcl|mdm:103407859 23 363 + 341 Gaps:9 93.80 371 73.28 1e-179 uncharacterized LOC103407859
blastp_kegg lcl|gmx:100784928 1 363 + 363 Gaps:4 100.00 363 71.90 4e-179 uncharacterized LOC100784928
blastp_kegg lcl|vvi:100241929 1 363 + 363 Gaps:13 100.00 362 69.06 3e-177 uncharacterized LOC100241929
blastp_kegg lcl|fve:101311714 1 363 + 363 Gaps:8 100.00 361 72.02 1e-174 uncharacterized protein LOC101311714
rpsblast_cdd gnl|CDD|202252 73 330 + 258 Gaps:40 100.00 242 39.26 1e-40 pfam02485 Branch Core-2/I-Branching enzyme. This is a family of two different beta-1 6-N-acetylglucosaminyltransferase enzymes I-branching enzyme and core-2 branching enzyme . I-branching enzyme is responsible for the production of the blood group I-antigen during embryonic development. Core-2 branching enzyme forms crucial side-chain branches in O-glycans.

10 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 6 21 16 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
Phobius 1 25 25 SIGNAL_PEPTIDE none Signal peptide region none
PANTHER 3 184 182 PTHR31042:SF4 none none none
PANTHER 206 363 158 PTHR31042:SF4 none none none
Phobius 22 25 4 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
Pfam 73 329 257 PF02485 none Core-2/I-Branching enzyme IPR003406
Phobius 1 5 5 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
PANTHER 3 184 182 PTHR31042 none none none
PANTHER 206 363 158 PTHR31042 none none none
Phobius 26 363 338 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none

2 Localization

Analysis Start End Length
TMHMM 7 29 22
SignalP_EUK 1 23 22

5 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nEpiBC_3P Qrob_Chr01 1 v_1588_550 s_1AZJRA_1600 30,48 9,48 43,98 lod 2,3642 6,3
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6

0 Targeting