Protein : Qrob_P0526050.2 Q. robur
Protein Identifier  ? Qrob_P0526050.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=2) 1.10.99.3 - Violaxanthin de-epoxidase. Code Enzyme  EC:1.10.99.3
Gene Prediction Quality  validated Protein length 

Sequence

Length: 194  
Kegg Orthology  K09839
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0055114 oxidation-reduction process A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
GO:0009507 chloroplast A chlorophyll-containing plastid with thylakoids organized into grana and frets, or stroma thylakoids, and embedded in a stroma.
GO:0046422 violaxanthin de-epoxidase activity Catalysis of the reaction: violaxanthin + 2 ascorbate = zeaxanthin + 2 dehydroascorbate + 2 H2O; and antheraxanthin + ascorbate = zeaxanthin + dehydroascorbate + H2O.

20 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pop:POPTR_0013s05000g 28 193 + 166 none 33.95 489 82.53 2e-93 POPTRDRAFT_571158 hypothetical protein
blastp_kegg lcl|cit:102577994 21 193 + 173 none 35.82 483 78.03 4e-92 VDE CitVDE violaxanthin de-epoxidase
blastp_kegg lcl|cic:CICLE_v10019925mg 21 193 + 173 none 35.82 483 77.46 8e-92 hypothetical protein
blastp_kegg lcl|mdm:103423686 21 193 + 173 none 44.13 392 78.03 4e-91 violaxanthin de-epoxidase chloroplastic-like
blastp_kegg lcl|tcc:TCM_026037 28 193 + 166 Gaps:4 34.91 487 80.59 1e-90 Non-photochemical quenching 1 isoform 1
blastp_kegg lcl|mdm:103414012 28 193 + 166 none 35.39 469 81.33 4e-90 violaxanthin de-epoxidase chloroplastic-like
blastp_kegg lcl|mdm:103451110 28 193 + 166 none 35.39 469 81.33 4e-90 violaxanthin de-epoxidase chloroplastic
blastp_kegg lcl|pxb:103968091 28 193 + 166 none 34.51 481 81.33 4e-90 violaxanthin de-epoxidase chloroplastic
blastp_kegg lcl|vvi:100257865 28 193 + 166 Gaps:3 34.03 479 82.21 1e-88 violaxanthin de-epoxidase chloroplastic-like
blastp_kegg lcl|pmum:103318745 28 193 + 166 none 34.51 481 78.92 2e-88 PmVDE violaxanthin de-epoxidase chloroplastic
blastp_pdb 3cqr_B 20 101 + 82 none 44.32 185 79.27 8e-43 mol:protein length:185 Violaxanthin de-epoxidase chloroplast
blastp_pdb 3cqr_A 20 101 + 82 none 44.32 185 79.27 8e-43 mol:protein length:185 Violaxanthin de-epoxidase chloroplast
blastp_pdb 3cqn_B 20 101 + 82 none 44.32 185 79.27 8e-43 mol:protein length:185 Violaxanthin de-epoxidase chloroplast
blastp_pdb 3cqn_A 20 101 + 82 none 44.32 185 79.27 8e-43 mol:protein length:185 Violaxanthin de-epoxidase chloroplast
blastp_uniprot_sprot sp|Q9SM43|VDE_SPIOL 28 193 + 166 Gaps:4 36.02 472 76.47 4e-88 Violaxanthin de-epoxidase chloroplastic OS Spinacia oleracea GN VDE1 PE 1 SV 2
blastp_uniprot_sprot sp|Q39249|VDE_ARATH 28 193 + 166 Gaps:4 36.80 462 77.06 2e-81 Violaxanthin de-epoxidase chloroplastic OS Arabidopsis thaliana GN VDE1 PE 1 SV 1
blastp_uniprot_sprot sp|Q40251|VDE_LACSA 20 193 + 174 Gaps:4 37.63 473 72.47 3e-80 Violaxanthin de-epoxidase chloroplastic OS Lactuca sativa GN VDE1 PE 1 SV 1
blastp_uniprot_sprot sp|Q40593|VDE_TOBAC 28 193 + 166 none 34.73 478 79.52 9e-78 Violaxanthin de-epoxidase chloroplastic OS Nicotiana tabacum GN VDE1 PE 2 SV 1
rpsblast_cdd gnl|CDD|178000 28 190 + 163 Gaps:6 37.14 455 72.19 8e-76 PLN02372 PLN02372 violaxanthin de-epoxidase.
rpsblast_cdd gnl|CDD|203587 28 107 + 80 none 40.40 198 88.75 7e-45 pfam07137 VDE Violaxanthin de-epoxidase (VDE). This family represents a conserved region approximately 150 residues long within plant violaxanthin de-epoxidase (VDE). In higher plants violaxanthin de-epoxidase forms part of a conserved system that dissipates excess energy as heat in the light-harvesting complexes of photosystem II (PSII) thus protecting them from photo-inhibitory damage.

2 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SUPERFAMILY 35 101 67 SSF50814 none none IPR011038
Pfam 23 107 85 PF07137 "KEGG:00906+1.10.99.3" Violaxanthin de-epoxidase (VDE) IPR010788

0 Localization

5 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran_2000_2002_QTL6_Delta.F Qrob_Chr03 3 s_2HYXJ2_207 s_1AUAXK_317 29.12 6,3 45,37 lod 3.1666 0.026
Bourran2_2014_nLBD_3P Qrob_Chr03 3 s_1ET7H8_604 s_1BYNB5_834 23,73 0 46,72 lod 1,7573 3,8
PM_1999_QTL14_peak_Bud_burst_3P Qrob_Chr03 3 s_2F0SI1_756 v_6056_735 11,78 3,78 50,78 lod 2,5 4,5
Bourran2_2014_nFork*_3P Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,28 7,43 41,48 lod 2,4044 5,5
Bourran2_2014_rEpiBC*_3P Qrob_Chr03 3 s_1A3B3X_1163 s_1DKGMO_450 23,04 4,92 41,12 lod 2,5668 7

0 Targeting