Protein : Qrob_P0526040.2 Q. robur
Protein Identifier  ? Qrob_P0526040.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=2) 1.10.99.3 - Violaxanthin de-epoxidase. Code Enzyme  EC:1.10.99.3
Gene Prediction Quality  validated Protein length 

Sequence

Length: 172  
Kegg Orthology  K09839
Paste the following link
Lists
This Protein isn't in any lists. Upload a list.

Sequence Feature Displayer

Protein Sequence Displayer

J Browse Displayer

0 Synonyms

3 GO Terms

Identifier Name Description
GO:0055114 oxidation-reduction process A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
GO:0009507 chloroplast A chlorophyll-containing plastid with thylakoids organized into grana and frets, or stroma thylakoids, and embedded in a stroma.
GO:0046422 violaxanthin de-epoxidase activity Catalysis of the reaction: violaxanthin + 2 ascorbate = zeaxanthin + 2 dehydroascorbate + 2 H2O; and antheraxanthin + ascorbate = zeaxanthin + dehydroascorbate + H2O.

20 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pper:PRUPE_ppa005029mg 9 171 + 163 none 33.96 480 91.41 3e-107 hypothetical protein
blastp_kegg lcl|pmum:103318745 9 171 + 163 none 33.89 481 91.41 4e-107 PmVDE violaxanthin de-epoxidase chloroplastic
blastp_kegg lcl|pxb:103968091 9 171 + 163 none 33.89 481 89.57 3e-106 violaxanthin de-epoxidase chloroplastic
blastp_kegg lcl|vvi:100257865 9 171 + 163 none 34.03 479 90.18 2e-105 violaxanthin de-epoxidase chloroplastic-like
blastp_kegg lcl|mdm:103451110 9 171 + 163 none 34.75 469 88.96 4e-105 violaxanthin de-epoxidase chloroplastic
blastp_kegg lcl|mdm:103423686 9 171 + 163 none 41.58 392 88.96 4e-105 violaxanthin de-epoxidase chloroplastic-like
blastp_kegg lcl|mus:103974860 9 171 + 163 none 50.78 321 87.12 1e-104 violaxanthin de-epoxidase chloroplastic-like
blastp_kegg lcl|mdm:103414012 9 171 + 163 none 34.75 469 88.96 1e-104 violaxanthin de-epoxidase chloroplastic-like
blastp_kegg lcl|cic:CICLE_v10019925mg 9 171 + 163 none 33.75 483 86.50 7e-104 hypothetical protein
blastp_kegg lcl|pda:103721734 9 171 + 163 none 33.82 482 87.12 1e-103 violaxanthin de-epoxidase chloroplastic
blastp_pdb 3cqr_B 71 171 + 101 Gaps:1 55.14 185 80.39 5e-57 mol:protein length:185 Violaxanthin de-epoxidase chloroplast
blastp_pdb 3cqr_A 71 171 + 101 Gaps:1 55.14 185 80.39 5e-57 mol:protein length:185 Violaxanthin de-epoxidase chloroplast
blastp_pdb 3cqn_B 71 171 + 101 Gaps:1 55.14 185 80.39 5e-57 mol:protein length:185 Violaxanthin de-epoxidase chloroplast
blastp_pdb 3cqn_A 71 171 + 101 Gaps:1 55.14 185 80.39 5e-57 mol:protein length:185 Violaxanthin de-epoxidase chloroplast
blastp_uniprot_sprot sp|Q9SM43|VDE_SPIOL 9 171 + 163 none 34.53 472 85.89 3e-103 Violaxanthin de-epoxidase chloroplastic OS Spinacia oleracea GN VDE1 PE 1 SV 2
blastp_uniprot_sprot sp|Q39249|VDE_ARATH 9 171 + 163 Gaps:1 35.50 462 85.37 2e-101 Violaxanthin de-epoxidase chloroplastic OS Arabidopsis thaliana GN VDE1 PE 1 SV 1
blastp_uniprot_sprot sp|Q40593|VDE_TOBAC 9 171 + 163 none 34.10 478 86.50 5e-101 Violaxanthin de-epoxidase chloroplastic OS Nicotiana tabacum GN VDE1 PE 2 SV 1
blastp_uniprot_sprot sp|Q40251|VDE_LACSA 9 171 + 163 none 34.46 473 82.21 3e-96 Violaxanthin de-epoxidase chloroplastic OS Lactuca sativa GN VDE1 PE 1 SV 1
rpsblast_cdd gnl|CDD|178000 8 171 + 164 Gaps:1 36.26 455 81.82 9e-99 PLN02372 PLN02372 violaxanthin de-epoxidase.
rpsblast_cdd gnl|CDD|203587 54 171 + 118 none 59.60 198 85.59 3e-68 pfam07137 VDE Violaxanthin de-epoxidase (VDE). This family represents a conserved region approximately 150 residues long within plant violaxanthin de-epoxidase (VDE). In higher plants violaxanthin de-epoxidase forms part of a conserved system that dissipates excess energy as heat in the light-harvesting complexes of photosystem II (PSII) thus protecting them from photo-inhibitory damage.

3 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 54 171 118 PF07137 "KEGG:00906+1.10.99.3" Violaxanthin de-epoxidase (VDE) IPR010788
SUPERFAMILY 77 170 94 SSF50814 none none IPR011038
ProSitePatterns 88 99 12 PS00213 none Lipocalin signature. IPR022272

0 Localization

5 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran_2000_2002_QTL6_Delta.F Qrob_Chr03 3 s_2HYXJ2_207 s_1AUAXK_317 29.12 6,3 45,37 lod 3.1666 0.026
Bourran2_2014_nLBD_3P Qrob_Chr03 3 s_1ET7H8_604 s_1BYNB5_834 23,73 0 46,72 lod 1,7573 3,8
PM_1999_QTL14_peak_Bud_burst_3P Qrob_Chr03 3 s_2F0SI1_756 v_6056_735 11,78 3,78 50,78 lod 2,5 4,5
Bourran2_2014_nFork*_3P Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,28 7,43 41,48 lod 2,4044 5,5
Bourran2_2014_rEpiBC*_3P Qrob_Chr03 3 s_1A3B3X_1163 s_1DKGMO_450 23,04 4,92 41,12 lod 2,5668 7

0 Targeting