Protein : Qrob_P0522570.2 Q. robur
Protein Identifier  ? Qrob_P0522570.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=3) K13431 - signal recognition particle receptor subunit alpha Gene Prediction Quality  validated
Protein length 

Sequence

Length: 436  
Kegg Orthology  K13431
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0 Synonyms

7 GO Terms

Identifier Name Description
GO:0006886 intracellular protein transport The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell.
GO:0006810 transport The directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells, or within a multicellular organism by means of some agent such as a transporter or pore.
GO:0005525 GTP binding Interacting selectively and non-covalently with GTP, guanosine triphosphate.
GO:0006614 SRP-dependent cotranslational protein targeting to membrane The targeting of proteins to a membrane that occurs during translation and is dependent upon two key components, the signal-recognition particle (SRP) and the SRP receptor. SRP is a cytosolic particle that transiently binds to the endoplasmic reticulum (ER) signal sequence in a nascent protein, to the large ribosomal unit, and to the SRP receptor in the ER membrane.
GO:0003924 GTPase activity Catalysis of the reaction: GTP + H2O = GDP + phosphate.
GO:0005047 signal recognition particle binding Interacting selectively and non-covalently with the signal recognition particle.
GO:0005785 signal recognition particle receptor complex A transmembrane heterodimeric protein located in the membrane of the rough endoplasmic reticulum. Both subunits contain GTPase domains with which signal recognition particle interacts. In the presence of GTP and SRP receptor, SRP is released from the ribosome-nascent chain complex.

34 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pmum:103341280 1 435 + 435 Gaps:8 70.13 626 83.60 0.0 signal recognition particle receptor subunit alpha homolog
blastp_kegg lcl|pxb:103949062 1 435 + 435 Gaps:9 69.89 621 83.64 0.0 signal recognition particle receptor subunit alpha homolog
blastp_kegg lcl|pper:PRUPE_ppa002859mg 1 435 + 435 Gaps:8 70.13 626 82.92 0.0 hypothetical protein
blastp_kegg lcl|mdm:103415545 1 435 + 435 Gaps:9 69.89 621 83.64 0.0 signal recognition particle receptor subunit alpha-like
blastp_kegg lcl|cmo:103493693 1 435 + 435 Gaps:7 69.69 617 81.86 0.0 signal recognition particle receptor subunit alpha homolog
blastp_kegg lcl|csv:101217753 1 435 + 435 Gaps:7 69.69 617 81.63 0.0 signal recognition particle receptor subunit alpha homolog
blastp_kegg lcl|cic:CICLE_v10007753mg 1 435 + 435 Gaps:3 69.89 621 82.03 0.0 hypothetical protein
blastp_kegg lcl|cit:102611068 1 435 + 435 Gaps:3 69.89 621 81.80 0.0 signal recognition particle receptor subunit alpha-like
blastp_kegg lcl|pxb:103955991 1 435 + 435 Gaps:9 69.89 621 83.18 0.0 signal recognition particle receptor subunit alpha homolog
blastp_kegg lcl|fve:101290796 1 435 + 435 Gaps:10 70.13 626 81.55 0.0 signal recognition particle receptor subunit alpha homolog
blastp_pdb 2go5_1 1 122 + 122 Gaps:15 67.57 185 38.40 2e-15 mol:protein length:185 Signal recognition particle receptor alpha su
blastp_pdb 2fh5_A 1 122 + 122 Gaps:15 67.57 185 38.40 2e-15 mol:protein length:185 Signal recognition particle receptor alpha su
blastp_pdb 3e70_C 331 435 + 105 Gaps:3 31.10 328 37.25 4e-11 mol:protein length:328 Signal recognition particle receptor
blastp_pdb 3dmd_C 331 435 + 105 Gaps:3 31.10 328 37.25 4e-11 mol:protein length:328 Signal recognition particle receptor
blastp_pdb 3dmd_A 331 435 + 105 Gaps:3 31.10 328 37.25 4e-11 mol:protein length:328 Signal recognition particle receptor
blastp_pdb 3dmd_B 331 435 + 105 Gaps:3 31.10 328 37.25 4e-11 mol:protein length:328 Signal recognition particle receptor
blastp_pdb 3dm9_B 331 435 + 105 Gaps:3 31.10 328 37.25 4e-11 mol:protein length:328 Signal recognition particle receptor
blastp_uniprot_sprot sp|Q9U5L1|SRPR_DROME 1 435 + 435 Gaps:47 67.43 614 36.96 9e-57 Signal recognition particle receptor subunit alpha homolog OS Drosophila melanogaster GN Gtp-bp PE 1 SV 2
blastp_uniprot_sprot sp|Q9DBG7|SRPR_MOUSE 1 435 + 435 Gaps:34 68.40 636 34.71 4e-56 Signal recognition particle receptor subunit alpha OS Mus musculus GN Srpr PE 1 SV 1
blastp_uniprot_sprot sp|P06625|SRPR_CANFA 1 435 + 435 Gaps:70 68.50 638 34.78 8e-55 Signal recognition particle receptor subunit alpha OS Canis familiaris GN SRPR PE 2 SV 2
blastp_uniprot_sprot sp|P08240|SRPR_HUMAN 1 435 + 435 Gaps:50 68.50 638 35.01 8e-54 Signal recognition particle receptor subunit alpha OS Homo sapiens GN SRPR PE 1 SV 2
blastp_uniprot_sprot sp|Q3MHE8|SRPR_BOVIN 1 435 + 435 Gaps:97 68.54 639 35.16 3e-52 Signal recognition particle receptor subunit alpha OS Bos taurus GN SRPR PE 2 SV 1
blastp_uniprot_sprot sp|Q54ZR7|SRPR_DICDI 318 435 + 118 Gaps:1 19.02 615 52.99 1e-29 Signal recognition particle receptor subunit alpha OS Dictyostelium discoideum GN srpr PE 3 SV 1
blastp_uniprot_sprot sp|O43032|SRPR_SCHPO 324 435 + 112 Gaps:1 20.66 547 46.90 2e-22 Signal recognition particle receptor subunit alpha homolog OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN srp101 PE 3 SV 1
blastp_uniprot_sprot sp|P32916|SRPR_YEAST 305 435 + 131 Gaps:10 22.71 621 41.84 1e-21 Signal recognition particle receptor subunit alpha homolog OS Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN SRP101 PE 1 SV 2
blastp_uniprot_sprot sp|P27414|FTSY_SULAC 331 435 + 105 Gaps:2 27.91 369 32.04 1e-10 Signal recognition particle receptor FtsY OS Sulfolobus acidocaldarius (strain ATCC 33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB 11770) GN ftsY PE 3 SV 1
blastp_uniprot_sprot sp|Q57739|FTSY_METJA 335 435 + 101 Gaps:1 24.45 409 39.00 2e-08 Signal recognition particle receptor FtsY OS Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN ftsY PE 3 SV 1
rpsblast_cdd gnl|CDD|190861 27 301 + 275 Gaps:33 100.00 272 29.04 9e-44 pfam04086 SRP-alpha_N Signal recognition particle alpha subunit N-terminal. SRP is a complex of six distinct polypeptides and a 7S RNA that is essential for transferring nascent polypeptide chains that are destined for export from the cell to the translocation apparatus of the endoplasmic reticulum (ER) membrane. SRP binds hydrophobic signal sequences as they emerge from the ribosome and arrests translation.
rpsblast_cdd gnl|CDD|184937 288 435 + 148 Gaps:5 42.56 336 36.36 1e-18 PRK14974 PRK14974 cell division protein FtsY Provisional.
rpsblast_cdd gnl|CDD|30898 294 435 + 142 Gaps:13 41.47 340 35.46 1e-15 COG0552 FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion].

10 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 63 435 373 PTHR11564 none none none
SUPERFAMILY 316 397 82 SSF47364 "Reactome:REACT_15380" none IPR013822
SMART 313 395 83 SM00963 "Reactome:REACT_15380" SRP54-type protein, helical bundle domain IPR013822
Pfam 316 383 68 PF02881 "Reactome:REACT_15380" SRP54-type protein, helical bundle domain IPR013822
PANTHER 63 435 373 PTHR11564:SF16 none none none
Pfam 28 301 274 PF04086 none Signal recognition particle, alpha subunit, N-terminal IPR007222
Gene3D 317 397 81 G3DSA:1.20.120.140 none none none
SUPERFAMILY 1 124 124 SSF64356 none none IPR011012
Coils 111 132 22 Coil none none none
Gene3D 412 435 24 G3DSA:3.40.50.300 none none IPR027417

0 Localization

0 Qtllist

0 Targeting