Protein : Qrob_P0517960.2 Q. robur
Protein Identifier  ? Qrob_P0517960.2 Organism . Name  Quercus robur
Score  99.0 Score Type  egn
Protein Description  (M=2) PTHR10217//PTHR10217:SF457 - VOLTAGE AND LIGAND GATED POTASSIUM CHANNEL // SUBFAMILY NOT NAMED Gene Prediction Quality  validated
Protein length 

Sequence

Length: 762  
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0 Synonyms

7 GO Terms

Identifier Name Description
GO:0005515 protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
GO:0016020 membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
GO:0055085 transmembrane transport The process in which a solute is transported from one side of a membrane to the other.
GO:0006813 potassium ion transport The directed movement of potassium ions (K+) into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
GO:0005216 ion channel activity Enables the facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism. May be either selective (it enables passage of a specific ion only) or non-selective (it enables passage of two or more ions of same charge but different size).
GO:0006811 ion transport The directed movement of charged atoms or small charged molecules into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
GO:0005249 voltage-gated potassium channel activity Enables the transmembrane transfer of a potassium ion by a voltage-gated channel. A voltage-gated channel is a channel whose open state is dependent on the voltage across the membrane in which it is embedded.

35 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pper:PRUPE_ppa001715mg 1 761 + 761 Gaps:30 98.45 775 71.82 0.0 hypothetical protein
blastp_kegg lcl|pmum:103325120 1 761 + 761 Gaps:38 98.44 767 72.19 0.0 potassium channel KAT1-like
blastp_kegg lcl|vvi:100233105 1 761 + 761 Gaps:17 98.10 791 68.94 0.0 SIRK inward rectifying shaker-like K+ channel
blastp_kegg lcl|mdm:103444001 1 761 + 761 Gaps:35 99.61 761 69.53 0.0 potassium channel KAT1-like
blastp_kegg lcl|pxb:103951275 1 761 + 761 Gaps:35 98.31 771 69.53 0.0 potassium channel KAT1-like
blastp_kegg lcl|cic:CICLE_v10014336mg 1 761 + 761 Gaps:19 98.47 784 68.26 0.0 hypothetical protein
blastp_kegg lcl|cit:102616145 1 761 + 761 Gaps:19 98.47 784 68.01 0.0 potassium channel KAT2-like
blastp_kegg lcl|tcc:TCM_029493 1 761 + 761 Gaps:38 90.94 828 70.39 0.0 Potassium channel in 2
blastp_kegg lcl|rcu:RCOM_0632940 1 754 + 754 Gaps:20 94.71 813 66.62 0.0 Potassium channel KAT2 putative
blastp_kegg lcl|fve:101291604 1 728 + 728 Gaps:34 99.18 734 65.52 0.0 potassium channel KAT1-like
blastp_pdb 2ptm_A 301 437 + 137 Gaps:9 71.72 198 21.13 2e-06 mol:protein length:198 Hyperpolarization-activated (Ih) channel
blastp_pdb 2xzt_H 542 624 + 83 none 61.03 136 32.53 8e-06 mol:protein length:136 DARPIN-3.4_I78S
blastp_pdb 2xzt_G 542 624 + 83 none 61.03 136 32.53 8e-06 mol:protein length:136 DARPIN-3.4_I78S
blastp_uniprot_sprot sp|Q39128|KAT1_ARATH 1 760 + 760 Gaps:116 99.56 677 64.99 0.0 Potassium channel KAT1 OS Arabidopsis thaliana GN KAT1 PE 1 SV 2
blastp_uniprot_sprot sp|Q38849|KAT2_ARATH 1 761 + 761 Gaps:23 89.96 697 68.74 0.0 Potassium channel KAT2 OS Arabidopsis thaliana GN KAT2 PE 1 SV 3
blastp_uniprot_sprot sp|Q6K3T2|KAT1_ORYSJ 23 761 + 739 Gaps:75 97.21 718 53.58 0.0 Potassium channel KAT1 OS Oryza sativa subsp. japonica GN Os02g0245800 PE 2 SV 1
blastp_uniprot_sprot sp|Q5JM04|KAT3_ORYSJ 30 481 + 452 Gaps:15 93.03 502 65.52 0.0 Potassium channel KAT3 OS Oryza sativa subsp. japonica GN Os01g0756700 PE 2 SV 1
blastp_uniprot_sprot sp|Q0JKV1|AKT1_ORYSJ 23 761 + 739 Gaps:89 92.09 935 45.76 0.0 Potassium channel AKT1 OS Oryza sativa subsp. japonica GN AKT1 PE 2 SV 1
blastp_uniprot_sprot sp|P0C550|AKT1_ORYSI 23 761 + 739 Gaps:89 92.09 935 45.76 0.0 Potassium channel AKT1 OS Oryza sativa subsp. indica GN AKT1 PE 2 SV 1
blastp_uniprot_sprot sp|Q5QNI1|KAT2_ORYSJ 32 761 + 730 Gaps:15 91.68 601 60.80 0.0 Potassium channel KAT2 OS Oryza sativa subsp. japonica GN Os01g0210700 PE 2 SV 2
blastp_uniprot_sprot sp|Q38998|AKT1_ARATH 20 759 + 740 Gaps:75 96.15 857 46.12 0.0 Potassium channel AKT1 OS Arabidopsis thaliana GN AKT1 PE 1 SV 2
blastp_uniprot_sprot sp|Q8GXE6|AKT6_ARATH 30 760 + 731 Gaps:97 93.02 888 47.09 0.0 Potassium channel AKT6 OS Arabidopsis thaliana GN AKT6 PE 1 SV 2
blastp_uniprot_sprot sp|Q9SCX5|AKT5_ARATH 16 761 + 746 Gaps:99 93.52 880 46.66 0.0 Probable potassium channel AKT5 OS Arabidopsis thaliana GN AKT5 PE 2 SV 2
rpsblast_cdd gnl|CDD|178734 26 761 + 736 Gaps:118 96.72 823 43.34 0.0 PLN03192 PLN03192 Voltage-dependent potassium channel Provisional.
rpsblast_cdd gnl|CDD|204757 690 761 + 72 Gaps:3 100.00 69 62.32 1e-26 pfam11834 DUF3354 Domain of unknown function (DUF3354). This domain is functionally uncharacterized. This domain is found in eukaryotes. This presumed domain is about 60 amino acids in length.
rpsblast_cdd gnl|CDD|201279 94 292 + 199 Gaps:29 100.00 194 22.68 4e-20 pfam00520 Ion_trans Ion transport protein. This family contains Sodium Potassium Calcium ion channels. This family is 6 transmembrane helices in which the last two helices flank a loop which determines ion selectivity. In some sub-families (e.g. Na channels) the domain is repeated four times whereas in others (e.g. K channels) the protein forms as a tetramer in the membrane. A bacterial structure of the protein is known for the last two helices but is not the Pfam family due to it lacking the first four helices.
rpsblast_cdd gnl|CDD|28920 374 476 + 103 Gaps:12 100.00 115 29.57 1e-13 cd00038 CAP_ED effector domain of the CAP family of transcription factors members include CAP (or cAMP receptor protein (CRP)) which binds cAMP FNR (fumarate and nitrate reduction) which uses an iron-sulfur cluster to sense oxygen) and CooA a heme containing CO sensor. In all cases binding of the effector leads to conformational changes and the ability to activate transcription. Cyclic nucleotide-binding domain similar to CAP are also present in cAMP- and cGMP-dependent protein kinases (cAPK and cGPK) and vertebrate cyclic nucleotide-gated ion-channels. Cyclic nucleotide-monophosphate binding domain proteins that bind cyclic nucleotides (cAMP or cGMP) share a structural domain of about 120 residues the best studied is the prokaryotic catabolite gene activator CAP where such a domain is known to be composed of three alpha-helices and a distinctive eight-stranded antiparallel beta-barrel structure three conserved glycine residues are thought to be essential for maintenance of the structural integrity of the beta-barrel CooA is a homodimeric transcription factor that belongs to CAP family cAMP- and cGMP-dependent protein kinases (cAPK and cGPK) contain two tandem copies of the cyclic nucleotide-binding domain cAPK's are composed of two different subunits a catalytic chain and a regulatory chain which contains both copies of the domain cGPK's are single chain enzymes that include the two copies of the domain in their N-terminal section also found in vertebrate cyclic nucleotide-gated ion-channels.
rpsblast_cdd gnl|CDD|197516 374 479 + 106 Gaps:14 100.00 120 22.50 6e-13 smart00100 cNMP Cyclic nucleotide-monophosphate binding domain. Catabolite gene activator protein (CAP) is a prokaryotic homologue of eukaryotic cNMP-binding domains present in ion channels and cNMP-dependent kinases.
rpsblast_cdd gnl|CDD|203792 228 293 + 66 none 89.19 74 33.33 1e-08 pfam07885 Ion_trans_2 Ion channel. This family includes the two membrane helix type ion channels found in bacteria.
rpsblast_cdd gnl|CDD|31008 368 483 + 116 Gaps:12 59.81 214 20.31 2e-07 COG0664 Crp cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms].

36 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 117 136 20 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Pfam 690 760 71 PF11834 none Domain of unknown function (DUF3354) IPR021789
PANTHER 41 484 444 PTHR10217 none none none
SUPERFAMILY 552 624 73 SSF48403 none none IPR020683
Phobius 137 157 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Gene3D 558 625 68 G3DSA:1.25.40.20 none none IPR020683
SUPERFAMILY 55 296 242 SSF81324 none none none
Phobius 163 182 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 158 162 5 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
ProSiteProfiles 374 482 109 PS50042 none cAMP/cGMP binding motif profile. IPR000595
Phobius 298 761 464 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
ProSiteProfiles 568 600 33 PS50088 none Ankyrin repeat profile. IPR002110
Pfam 394 469 76 PF00027 none Cyclic nucleotide-binding domain IPR000595
Phobius 86 90 5 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Pfam 569 624 56 PF12796 none Ankyrin repeats (3 copies) IPR020683
Phobius 91 116 26 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
PANTHER 41 484 444 PTHR10217:SF457 none none none
Phobius 183 193 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
SUPERFAMILY 301 483 183 SSF51206 none none IPR018490
Pfam 94 292 199 PF00520 none Ion transport protein IPR005821
Phobius 1 65 65 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
PRINTS 288 297 10 PR01463 none EAG/ELK/ERG potassium channel family signature IPR003938
PRINTS 107 116 10 PR01463 none EAG/ELK/ERG potassium channel family signature IPR003938
PRINTS 244 261 18 PR01463 none EAG/ELK/ERG potassium channel family signature IPR003938
PRINTS 73 80 8 PR01463 none EAG/ELK/ERG potassium channel family signature IPR003938
PRINTS 96 106 11 PR01463 none EAG/ELK/ERG potassium channel family signature IPR003938
PRINTS 270 281 12 PR01463 none EAG/ELK/ERG potassium channel family signature IPR003938
ProSiteProfiles 561 623 63 PS50297 none Ankyrin repeat region circular profile. IPR020683
Phobius 275 297 23 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
SMART 374 480 107 SM00100 none Cyclic nucleotide-monophosphate binding domain IPR000595

4 Localization

Analysis Start End Length
TMHMM 195 217 22
TMHMM 275 297 22
TMHMM 65 87 22
TMHMM 102 124 22

0 Qtllist

0 Targeting