Protein : Qrob_P0517660.2 Q. robur
Protein Identifier  ? Qrob_P0517660.2 Organism . Name  Quercus robur
Score  97.1 Score Type  egn
Protein Description  (M=1) K02148 - V-type H+-transporting ATPase subunit C [EC:3.6.3.14] Gene Prediction Quality  validated
Protein length 

Sequence

Length: 214  
Kegg Orthology  K02148
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0015991 ATP hydrolysis coupled proton transport The transport of protons against an electrochemical gradient, using energy from ATP hydrolysis.
GO:0015078 hydrogen ion transmembrane transporter activity Enables the transfer of hydrogen ions from one side of a membrane to the other.
GO:0033180 proton-transporting V-type ATPase, V1 domain A protein complex that forms part of a proton-transporting V-type ATPase and catalyzes ATP hydrolysis. The V1 complex consists of: (1) a globular headpiece with three alternating copies of subunits A and B that form a ring, (2) a central rotational stalk composed of single copies of subunits D and F, and (3) a peripheral stalk made of subunits C, E, G and H. Subunits A and B mediate the hydrolysis of ATP at three reaction sites associated with subunit A.

24 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|tcc:TCM_017322 14 196 + 183 none 48.80 375 91.26 4e-120 Vacuolar ATP synthase subunit C (VATC) / V-ATPase C subunit / vacuolar proton pump C subunit (DET3)
blastp_kegg lcl|pper:PRUPE_ppa007256mg 14 207 + 194 none 51.60 376 85.05 1e-117 hypothetical protein
blastp_kegg lcl|rcu:RCOM_1445580 14 196 + 183 none 48.67 376 90.16 2e-117 vacuolar ATP synthase subunit C putative (EC:3.6.3.14)
blastp_kegg lcl|pmum:103330274 14 207 + 194 none 51.60 376 84.54 2e-117 V-type proton ATPase subunit C
blastp_kegg lcl|fve:101301315 14 199 + 186 none 49.34 377 88.17 3e-116 V-type proton ATPase subunit C-like
blastp_kegg lcl|mdm:103425847 14 207 + 194 none 74.05 262 82.47 1e-115 V-type proton ATPase subunit C-like
blastp_kegg lcl|cic:CICLE_v10015638mg 14 196 + 183 none 48.80 375 90.16 3e-115 hypothetical protein
blastp_kegg lcl|cit:102618193 14 196 + 183 none 48.80 375 90.16 3e-115 V-type proton ATPase subunit C-like
blastp_kegg lcl|pxb:103966580 14 207 + 194 none 51.60 376 82.99 1e-114 V-type proton ATPase subunit C
blastp_kegg lcl|brp:103836138 14 196 + 183 none 48.67 376 85.79 2e-113 V-type proton ATPase subunit C-like
blastp_pdb 1u7l_A 15 188 + 174 Gaps:1 44.64 392 42.86 3e-37 mol:protein length:392 Vacuolar ATP synthase subunit C
blastp_uniprot_sprot sp|Q9SDS7|VATC_ARATH 14 196 + 183 none 48.80 375 85.25 1e-112 V-type proton ATPase subunit C OS Arabidopsis thaliana GN VHA-C PE 1 SV 1
blastp_uniprot_sprot sp|Q9SCB9|VATC_HORVU 14 172 + 159 Gaps:2 45.48 354 70.19 2e-71 V-type proton ATPase subunit C OS Hordeum vulgare GN VATC PE 1 SV 1
blastp_uniprot_sprot sp|Q7T385|VTC1A_DANRE 14 191 + 178 Gaps:1 46.74 383 45.25 2e-48 V-type proton ATPase subunit C 1-A OS Danio rerio GN atp6v1c1a PE 2 SV 1
blastp_uniprot_sprot sp|Q5XIY6|VTC1B_DANRE 14 191 + 178 Gaps:1 46.98 381 44.69 2e-47 V-type proton ATPase subunit C 1-B OS Danio rerio GN atp6v1c1b PE 2 SV 1
blastp_uniprot_sprot sp|Q5FVI6|VATC1_RAT 14 191 + 178 Gaps:1 46.86 382 45.81 9e-47 V-type proton ATPase subunit C 1 OS Rattus norvegicus GN Atp6v1c1 PE 2 SV 1
blastp_uniprot_sprot sp|Q9Z1G3|VATC1_MOUSE 14 191 + 178 Gaps:1 46.86 382 45.81 1e-46 V-type proton ATPase subunit C 1 OS Mus musculus GN Atp6v1c1 PE 1 SV 4
blastp_uniprot_sprot sp|Q612A4|VATC_CAEBR 14 191 + 178 Gaps:1 46.49 385 45.81 1e-46 V-type proton ATPase subunit C OS Caenorhabditis briggsae GN vha-11 PE 3 SV 1
blastp_uniprot_sprot sp|Q9XXU9|VATC_CAEEL 14 191 + 178 Gaps:1 46.61 384 45.25 2e-46 V-type proton ATPase subunit C OS Caenorhabditis elegans GN vha-11 PE 2 SV 1
blastp_uniprot_sprot sp|Q5RDQ7|VATC1_PONAB 14 191 + 178 Gaps:1 46.86 382 45.25 3e-46 V-type proton ATPase subunit C 1 OS Pongo abelii GN ATP6V1C1 PE 2 SV 1
blastp_uniprot_sprot sp|Q4R5H9|VATC1_MACFA 14 191 + 178 Gaps:1 46.86 382 45.25 3e-46 V-type proton ATPase subunit C 1 OS Macaca fascicularis GN ATP6V1C1 PE 2 SV 1
rpsblast_cdd gnl|CDD|146048 14 192 + 179 Gaps:1 48.52 371 52.78 1e-70 pfam03223 V-ATPase_C V-ATPase subunit C.
rpsblast_cdd gnl|CDD|34728 14 188 + 175 Gaps:1 45.95 383 35.80 3e-39 COG5127 COG5127 Vacuolar H+-ATPase V1 sector subunit C [Energy production and conversion].
rpsblast_kog gnl|CDD|38120 14 192 + 179 Gaps:1 47.24 381 55.56 3e-67 KOG2909 KOG2909 KOG2909 Vacuolar H+-ATPase V1 sector subunit C [Energy production and conversion].

6 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 14 200 187 PTHR10137 none none IPR004907
Gene3D 17 92 76 G3DSA:3.30.70.100 none none none
Pfam 14 197 184 PF03223 none V-ATPase subunit C IPR004907
PANTHER 14 200 187 PTHR10137:SF0 none none none
Gene3D 93 166 74 G3DSA:1.20.1460.10 none none none
SUPERFAMILY 14 199 186 SSF118203 none none none

0 Localization

8 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2003_QTL2_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 87 lod 3,3 8,7
Bourran2_2004_QTL9_peak_Bud_burst_3P Qrob_Chr02 2 s_1C34E9_788 v_12238_322 50 25 75 lod 4,4 10,1
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL2_d13Cf Qrob_Chr02 2 s_1AQA4Z_1644 s_1AK5QX_947 53.67 14,01 79,68 lod 5.6594 0.03
Bourran1_2004_QTL2_peak_Bud_burst_3P Qrob_Chr02 2 s_1AW12F_382 s_1A77MR_223 42 6 64 lod 3,6 9,6
Bourran2_2002_QTL9_peak_Bud_burst_A4 Qrob_Chr02 2 s_1BFNDA_375 s_1A3VA1_2139 32,5 17 62 lod 3,1 4,2
Bourran2_2003_QTL8_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 0 72 lod 4,4 9,9
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL6_d13Cf Qrob_Chr02 2 s_1AEP21_172 v_6048_204 46.33 22,5 65,23 lod 4.972 0.03

0 Targeting