Protein : Qrob_P0511770.2 Q. robur
Protein Identifier  ? Qrob_P0511770.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=1) K13146 - integrator complex subunit 9 Gene Prediction Quality  validated
Protein length 

Sequence

Length: 705  
Kegg Orthology  K13146
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0016180 snRNA processing Any process involved in the conversion of a primary small nuclear RNA (snRNA) transcript into a mature snRNA molecule.
GO:0032039 integrator complex A protein complex that stably associates with the C-terminus of RNA polymerase II and mediates 3'-end processing of small nuclear RNAs generated by RNA polymerase II.

24 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cit:102624329 1 704 + 704 Gaps:26 100.00 680 68.38 0.0 integrator complex subunit 9 homolog
blastp_kegg lcl|pper:PRUPE_ppa002193mg 1 704 + 704 Gaps:9 100.00 703 67.85 0.0 hypothetical protein
blastp_kegg lcl|cic:CICLE_v10033512mg 1 704 + 704 Gaps:28 100.00 678 68.14 0.0 hypothetical protein
blastp_kegg lcl|tcc:TCM_045378 1 704 + 704 Gaps:20 100.00 688 66.57 0.0 hypothetical protein
blastp_kegg lcl|fve:101306868 1 704 + 704 Gaps:7 100.00 705 65.39 0.0 integrator complex subunit 9-like
blastp_kegg lcl|pxb:103952165 1 704 + 704 Gaps:30 100.00 690 67.97 0.0 integrator complex subunit 9 homolog
blastp_kegg lcl|vvi:100262013 1 704 + 704 Gaps:15 89.53 774 66.67 0.0 integrator complex subunit 9 homolog
blastp_kegg lcl|pop:POPTR_0004s24410g 2 704 + 703 Gaps:14 99.14 699 64.65 0.0 hypothetical protein
blastp_kegg lcl|rcu:RCOM_1194550 1 704 + 704 Gaps:5 100.00 705 63.40 0.0 hypothetical protein
blastp_kegg lcl|cam:101499865 1 704 + 704 Gaps:29 100.00 679 61.41 0.0 integrator complex subunit 9-like
blastp_uniprot_sprot sp|Q6DFF4|INT9_XENLA 1 702 + 702 Gaps:96 99.70 658 28.35 4e-61 Integrator complex subunit 9 OS Xenopus laevis GN ints9 PE 2 SV 1
blastp_uniprot_sprot sp|A7SBF0|INT9_NEMVE 16 697 + 682 Gaps:107 97.12 660 29.49 2e-60 Integrator complex subunit 9 homolog OS Nematostella vectensis GN ints9 PE 3 SV 1
blastp_uniprot_sprot sp|Q9NV88|INT9_HUMAN 1 702 + 702 Gaps:96 99.70 658 29.27 5e-60 Integrator complex subunit 9 OS Homo sapiens GN INTS9 PE 1 SV 2
blastp_uniprot_sprot sp|Q2KJA6|INT9_BOVIN 1 702 + 702 Gaps:102 99.70 658 28.81 9e-60 Integrator complex subunit 9 OS Bos taurus GN INTS9 PE 2 SV 1
blastp_uniprot_sprot sp|Q4R5Z4|INT9_MACFA 1 702 + 702 Gaps:117 99.69 637 30.39 5e-59 Integrator complex subunit 9 OS Macaca fascicularis GN INTS9 PE 2 SV 1
blastp_uniprot_sprot sp|Q5ZKK2|INT9_CHICK 1 702 + 702 Gaps:90 99.70 658 28.35 2e-58 Integrator complex subunit 9 OS Gallus gallus GN INTS9 PE 2 SV 1
blastp_uniprot_sprot sp|Q8K114|INT9_MOUSE 1 702 + 702 Gaps:96 99.70 658 28.66 1e-57 Integrator complex subunit 9 OS Mus musculus GN Ints9 PE 2 SV 1
blastp_uniprot_sprot sp|Q54SH0|INT9_DICDI 1 553 + 553 Gaps:86 73.74 712 27.05 9e-43 Integrator complex subunit 9 homolog OS Dictyostelium discoideum GN ints9 PE 3 SV 1
blastp_uniprot_sprot sp|Q9LKF9|CPSF2_ARATH 104 489 + 386 Gaps:99 41.27 739 27.87 1e-08 Cleavage and polyadenylation specificity factor subunit 2 OS Arabidopsis thaliana GN CPSF100 PE 1 SV 2
rpsblast_cdd gnl|CDD|198095 369 486 + 118 Gaps:10 87.30 126 29.09 2e-16 smart01027 Beta-Casp Beta-Casp domain. The beta-CASP domain is found C terminal to the beta-lactamase domain in pre-mRNA 3'-end-processing endonuclease. The active site of this enzyme is located at the interface of these two domains.
rpsblast_cdd gnl|CDD|204576 369 494 + 126 Gaps:15 97.58 124 31.40 2e-15 pfam10996 Beta-Casp Beta-Casp domain. The beta-CASP domain is found C terminal to the beta-lactamase domain in pre-mRNA 3'-end-processing endonuclease. The active site of this enzyme is located at the interface of these two domains.
rpsblast_cdd gnl|CDD|31968 189 485 + 297 Gaps:83 39.25 637 28.40 6e-09 COG1782 COG1782 Predicted metal-dependent RNase consists of a metallo-beta-lactamase domain and an RNA-binding KH domain [General function prediction only].
rpsblast_kog gnl|CDD|36353 1 704 + 704 Gaps:81 100.00 653 34.30 1e-120 KOG1138 KOG1138 KOG1138 Predicted cleavage and polyadenylation specificity factor (CPSF subunit) [RNA processing and modification].
rpsblast_kog gnl|CDD|36351 356 627 + 272 Gaps:46 50.70 501 24.41 3e-08 KOG1136 KOG1136 KOG1136 Predicted cleavage and polyadenylation specificity factor (CPSF subunit) [RNA processing and modification].

20 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 101 124 24 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
PANTHER 199 291 93 PTHR11203 none none none
PANTHER 90 179 90 PTHR11203 none none none
SMART 369 494 126 SM01027 none Beta-Casp domain IPR022712
PANTHER 90 179 90 PTHR11203:SF2 none none IPR027074
PANTHER 331 623 293 PTHR11203 none none none
SUPERFAMILY 1 35 35 SSF56281 none none IPR001279
SUPERFAMILY 340 574 235 SSF56281 none none IPR001279
SUPERFAMILY 200 298 99 SSF56281 none none IPR001279
SUPERFAMILY 89 161 73 SSF56281 none none IPR001279
PANTHER 1 46 46 PTHR11203:SF2 none none IPR027074
PANTHER 199 291 93 PTHR11203:SF2 none none IPR027074
PANTHER 331 623 293 PTHR11203:SF2 none none IPR027074
Pfam 369 486 118 PF10996 none Beta-Casp domain IPR022712
Phobius 125 704 580 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
PANTHER 1 46 46 PTHR11203 none none none
Gene3D 212 259 48 G3DSA:3.60.15.10 none none IPR001279
Gene3D 105 150 46 G3DSA:3.60.15.10 none none IPR001279
Gene3D 1 54 54 G3DSA:3.60.15.10 none none IPR001279
Phobius 1 100 100 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none

0 Localization

0 Qtllist

0 Targeting