Protein : Qrob_P0511720.2 Q. robur
Protein Identifier  ? Qrob_P0511720.2 Organism . Name  Quercus robur
Score  16.7 Score Type  egn
Protein Description  (M=1) K03252 - translation initiation factor eIF-3 subunit 8 Gene Prediction Quality  validated
Protein length 

Sequence

Length: 950  
Kegg Orthology  K03252
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0 Synonyms

6 GO Terms

Identifier Name Description
GO:0005515 protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
GO:0003723 RNA binding Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
GO:0003743 translation initiation factor activity Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide.
GO:0005852 eukaryotic translation initiation factor 3 complex A complex of several polypeptides that plays at least two important roles in protein synthesis: First, eIF3 binds to the 40S ribosome and facilitates loading of the Met-tRNA/eIF2.GTP ternary complex to form the 43S preinitiation complex. Subsequently, eIF3 apparently assists eIF4 in recruiting mRNAs to the 43S complex. The eIF3 complex contains five conserved core subunits, and may contain several additional proteins; the non-core subunits are thought to mediate association of the complex with specific sets of mRNAs.
GO:0006413 translational initiation The process preceding formation of the peptide bond between the first two amino acids of a protein. This includes the formation of a complex of the ribosome, mRNA, and an initiation complex that contains the first aminoacyl-tRNA.
GO:0031369 translation initiation factor binding Interacting selectively and non-covalently with a translation initiation factor, any polypeptide factor involved in the initiation of ribosome-mediated translation.

25 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|vvi:100252123 1 949 + 949 Gaps:19 100.00 946 81.08 0.0 eukaryotic translation initiation factor 3 subunit C-like
blastp_kegg lcl|pper:PRUPE_ppa001006mg 1 949 + 949 Gaps:18 100.00 935 80.43 0.0 hypothetical protein
blastp_kegg lcl|fve:101292703 1 949 + 949 Gaps:28 100.00 927 79.61 0.0 eukaryotic translation initiation factor 3 subunit C-like
blastp_kegg lcl|tcc:TCM_025033 1 947 + 947 Gaps:35 99.78 918 81.55 0.0 Eukaryotic translation initiation factor 3 subunit C2
blastp_kegg lcl|pper:PRUPE_ppa001017mg 1 949 + 949 Gaps:24 100.00 933 76.53 0.0 hypothetical protein
blastp_kegg lcl|pxb:103934531 1 949 + 949 Gaps:33 100.00 926 80.02 0.0 eukaryotic translation initiation factor 3 subunit C-like
blastp_kegg lcl|pmum:103339601 1 949 + 949 Gaps:24 100.00 933 76.96 0.0 eukaryotic translation initiation factor 3 subunit C-like
blastp_kegg lcl|mdm:103428869 1 949 + 949 Gaps:34 100.00 927 79.72 0.0 eukaryotic translation initiation factor 3 subunit C-like
blastp_kegg lcl|pxb:103962898 1 949 + 949 Gaps:33 100.00 926 79.81 0.0 eukaryotic translation initiation factor 3 subunit C-like
blastp_kegg lcl|mdm:103401984 1 949 + 949 Gaps:32 100.00 927 79.61 0.0 eukaryotic translation initiation factor 3 subunit C
blastp_uniprot_sprot sp|Q9XHM1|EIF3C_MEDTR 1 949 + 949 Gaps:38 100.00 935 73.37 0.0 Eukaryotic translation initiation factor 3 subunit C OS Medicago truncatula GN TIF3C1 PE 2 SV 1
blastp_uniprot_sprot sp|O49160|EIF3C_ARATH 1 947 + 947 Gaps:53 99.78 900 72.49 0.0 Eukaryotic translation initiation factor 3 subunit C OS Arabidopsis thaliana GN TIF3C1 PE 1 SV 2
blastp_uniprot_sprot sp|Q7SBD4|EIF3C_NEUCR 63 831 + 769 Gaps:67 83.72 872 41.92 7e-178 Eukaryotic translation initiation factor 3 subunit C OS Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN nip-1 PE 3 SV 1
blastp_uniprot_sprot sp|A7E471|EIF3C_SCLS1 61 879 + 819 Gaps:73 89.66 870 40.90 6e-177 Eukaryotic translation initiation factor 3 subunit C OS Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN nip1 PE 3 SV 1
blastp_uniprot_sprot sp|A6S043|EIF3C_BOTFB 61 879 + 819 Gaps:71 89.53 869 41.26 2e-174 Eukaryotic translation initiation factor 3 subunit C OS Botryotinia fuckeliana (strain B05.10) GN nip1 PE 3 SV 1
blastp_uniprot_sprot sp|A4QSX4|EIF3C_MAGO7 56 879 + 824 Gaps:163 93.06 865 39.38 3e-172 Eukaryotic translation initiation factor 3 subunit C OS Magnaporthe oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) GN NIP1 PE 3 SV 1
blastp_uniprot_sprot sp|Q0V1H5|EIF3C_PHANO 42 831 + 790 Gaps:68 88.16 853 41.49 1e-170 Eukaryotic translation initiation factor 3 subunit C OS Phaeosphaeria nodorum (strain SN15 / ATCC MYA-4574 / FGSC 10173) GN NIP1 PE 3 SV 1
blastp_uniprot_sprot sp|A1D9P1|EIF3C_NEOFI 46 829 + 784 Gaps:70 86.31 862 40.99 3e-170 Eukaryotic translation initiation factor 3 subunit C OS Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN nip1 PE 3 SV 1
blastp_uniprot_sprot sp|Q4W9S8|EIF3C_ASPFU 46 829 + 784 Gaps:68 86.31 862 41.13 5e-170 Eukaryotic translation initiation factor 3 subunit C OS Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN nip1 PE 3 SV 1
blastp_uniprot_sprot sp|B0YEH1|EIF3C_ASPFC 46 829 + 784 Gaps:68 86.31 862 41.13 5e-170 Eukaryotic translation initiation factor 3 subunit C OS Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) GN nip1 PE 3 SV 1
rpsblast_cdd gnl|CDD|147578 43 658 + 616 Gaps:37 100.00 593 62.90 0.0 pfam05470 eIF-3c_N Eukaryotic translation initiation factor 3 subunit 8 N-terminus. The largest of the mammalian translation initiation factors eIF3 consists of at least eight subunits ranging in mass from 35 to 170 kDa. eIF3 binds to the 40 S ribosome in an early step of translation initiation and promotes the binding of methionyl-tRNAi and mRNA.
rpsblast_cdd gnl|CDD|201772 695 793 + 99 Gaps:4 95.00 100 31.58 1e-14 pfam01399 PCI PCI domain. This domain has also been called the PINT motif (Proteasome Int-6 Nip-1 and TRIP-15).
rpsblast_cdd gnl|CDD|197859 727 815 + 89 Gaps:1 100.00 88 34.09 1e-14 smart00753 PAM PCI/PINT associated module.
rpsblast_cdd gnl|CDD|197510 727 815 + 89 Gaps:1 100.00 88 34.09 1e-14 smart00088 PINT motif in proteasome subunits Int-6 Nip-1 and TRIP-15. Also called the PCI (Proteasome COP9 Initiation factor 3) domain. Unknown function.
rpsblast_kog gnl|CDD|36292 3 873 + 871 Gaps:52 99.05 843 53.89 0.0 KOG1076 KOG1076 KOG1076 Translation initiation factor 3 subunit c (eIF-3c) [Translation ribosomal structure and biogenesis].

9 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 2 919 918 PTHR13937:SF0 none none none
Hamap 2 876 875 MF_03002 none Eukaryotic translation initiation factor 3 subunit C [EIF3C]. IPR027516
SMART 727 815 89 SM00088 none motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 IPR000717
PANTHER 2 919 918 PTHR13937 none none none
Pfam 666 794 129 PF01399 none PCI domain IPR000717
Gene3D 724 798 75 G3DSA:1.10.10.10 none none IPR011991
Pfam 44 658 615 PF05470 none Eukaryotic translation initiation factor 3 subunit 8 N-terminus IPR008905
Coils 149 177 29 Coil none none none
SUPERFAMILY 725 797 73 SSF46785 none none none

0 Localization

0 Qtllist

0 Targeting