Protein : Qrob_P0510430.2 Q. robur
Protein Identifier  ? Qrob_P0510430.2 Organism . Name  Quercus robur
Score  92.0 Score Type  egn
Protein Description  (M=1) PTHR12652:SF16 - PEROXISOMAL MEMBRANE PROTEIN 11C-RELATED (PTHR12652:SF16) Gene Prediction Quality  validated
Protein length 

Sequence

Length: 248  
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0005779 integral component of peroxisomal membrane The component of the peroxisomal membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
GO:0016559 peroxisome fission The division of a mature peroxisome within a cell to form two or more separate peroxisome compartments.

20 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|rcu:RCOM_1613770 1 226 + 226 none 96.17 235 86.28 3e-142 peroxisomal biogenesis factor putative
blastp_kegg lcl|cic:CICLE_v10022007mg 1 226 + 226 none 96.17 235 84.96 1e-140 hypothetical protein
blastp_kegg lcl|cit:102625032 1 226 + 226 none 96.17 235 84.96 1e-140 peroxisomal membrane protein 11D-like
blastp_kegg lcl|aly:ARALYDRAFT_470094 1 226 + 226 none 96.17 235 85.40 5e-140 peroxisomal biogenesis factor 11 family protein
blastp_kegg lcl|vvi:100267827 1 226 + 226 none 96.17 235 84.96 1e-139 peroxisomal membrane protein 11C-like
blastp_kegg lcl|cam:101488501 1 226 + 226 none 95.76 236 84.07 2e-139 peroxisomal membrane protein 11C-like
blastp_kegg lcl|gmx:100301880 1 226 + 226 none 96.17 235 84.51 4e-139 peroxisomal biogenesis factor 11 family protein
blastp_kegg lcl|pop:POPTR_0014s07250g 1 226 + 226 none 96.17 235 84.96 1e-138 POPTRDRAFT_730989 hypothetical protein
blastp_kegg lcl|ath:AT1G01820 1 226 + 226 none 96.17 235 83.63 2e-138 PEX11C peroxin 11C
blastp_kegg lcl|sly:101261748 1 226 + 226 none 96.17 235 83.63 2e-138 peroxisomal membrane protein 11C-like
blastp_uniprot_sprot sp|Q9LQ73|PX11C_ARATH 1 226 + 226 none 96.17 235 83.63 9e-140 Peroxisomal membrane protein 11C OS Arabidopsis thaliana GN PEX11C PE 1 SV 1
blastp_uniprot_sprot sp|O80845|PX11D_ARATH 2 226 + 225 none 95.34 236 82.67 1e-137 Peroxisomal membrane protein 11D OS Arabidopsis thaliana GN PEX11D PE 1 SV 2
blastp_uniprot_sprot sp|Q84JW1|PX11E_ARATH 1 226 + 226 Gaps:4 96.10 231 81.08 5e-131 Peroxisomal membrane protein 11E OS Arabidopsis thaliana GN PEX11E PE 1 SV 1
blastp_uniprot_sprot sp|Q10SM7|PX111_ORYSJ 1 226 + 226 none 95.36 237 74.78 7e-125 Peroxisomal membrane protein 11-1 OS Oryza sativa subsp. japonica GN PEX11-1 PE 2 SV 1
blastp_uniprot_sprot sp|Q5VRJ8|PX115_ORYSJ 1 226 + 226 none 97.00 233 74.34 2e-123 Peroxisomal membrane protein 11-5 OS Oryza sativa subsp. japonica GN PEX11-5 PE 2 SV 1
blastp_uniprot_sprot sp|Q10MN3|PX112_ORYSJ 34 196 + 163 Gaps:11 62.99 254 26.25 2e-06 Peroxisomal membrane protein 11-2 OS Oryza sativa subsp. japonica GN PEX11-2 PE 2 SV 1
blastp_uniprot_sprot sp|Q10MN2|PX113_ORYSJ 47 196 + 150 Gaps:11 58.26 242 29.79 4e-06 Peroxisomal membrane protein 11-3 OS Oryza sativa subsp. japonica GN PEX11-3 PE 2 SV 1
blastp_uniprot_sprot sp|A2XFQ8|PX113_ORYSI 47 196 + 150 Gaps:11 58.26 242 29.79 4e-06 Peroxisomal membrane protein 11-3 OS Oryza sativa subsp. indica GN PEX11-3 PE 2 SV 1
rpsblast_cdd gnl|CDD|191332 14 226 + 213 Gaps:15 98.67 225 29.28 4e-36 pfam05648 PEX11 Peroxisomal biogenesis factor 11 (PEX11). This family consists of several peroxisomal biogenesis factor 11 (PEX11) proteins from several eukaryotic species. The PEX11 peroxisomal membrane proteins promote peroxisome division in multiple eukaryotes.
rpsblast_kog gnl|CDD|39388 11 226 + 216 Gaps:10 97.00 233 39.38 9e-54 KOG4186 KOG4186 KOG4186 Peroxisomal biogenesis protein (peroxin) [Intracellular trafficking secretion and vesicular transport].

3 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 1 246 246 PTHR12652 none none none
PANTHER 1 246 246 PTHR12652:SF16 none none none
Pfam 14 225 212 PF05648 none Peroxisomal biogenesis factor 11 (PEX11) IPR008733

1 Localization

Analysis Start End Length
TMHMM 209 231 22

9 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2014_aSeqBC_A4 Qrob_Chr08 8 v_15999_278 v_AP13YL15_395 32,52 4,22 57,22 lod 2,7561 6,7
Bourran2_2014_nFork*_A4 Qrob_Chr08 8 PIE175 s_1CD7GJ_1398 31,22 5,24 57,24 lod 2,6724 6,8
Bourran2_2014_nPriLBD_A4 Qrob_Chr08 8 PIE175 v_9164_159 31,85 15,39 48,29 lod 2,8308 6,8
Bourran2_2015_rEpiBC_3P Qrob_Chr08 8 s_A9TNV_543 v_11837_70 9,93 9,83 11,15 lod 3.3 7.3
Champenoux_2015_nSeqBC_A4 Qrob_Chr08 8 v_AD7YD13_501 s_1A7IED_780 43,44 43,42 43,99 lod 3.7 8.9
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL3_d13Cf Qrob_Chr08 8 v_5216_549 v_11625_20 37.08 12,26 54,9 lod 6.5888 0.04

0 Targeting