Protein : Qrob_P0509160.2 Q. robur
Protein Identifier  ? Qrob_P0509160.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=1) PTHR11071:SF197 - TETRATRICOPEPTIDE-LIKE HELICAL DOMAIN-CONTAINING PROTEIN (PTHR11071:SF197) Code Enzyme  EC:5.2.1.8
Gene Prediction Quality  validated Protein length 

Sequence

Length: 182  
Kegg Orthology  K01802
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0006457 protein folding The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure.
GO:0000413 protein peptidyl-prolyl isomerization The modification of a protein by cis-trans isomerization of a proline residue.
GO:0003755 peptidyl-prolyl cis-trans isomerase activity Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0).

50 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pper:PRUPE_ppa012332mg 1 145 + 145 none 83.82 173 73.79 2e-74 hypothetical protein
blastp_kegg lcl|pmum:103334995 1 145 + 145 none 83.82 173 73.10 1e-73 peptidyl-prolyl cis-trans isomerase
blastp_kegg lcl|tcc:TCM_006687 1 145 + 145 none 83.82 173 73.10 4e-73 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein
blastp_kegg lcl|fve:101304630 2 145 + 144 none 82.76 174 72.92 7e-73 peptidyl-prolyl cis-trans isomerase 1-like
blastp_kegg lcl|pxb:103938354 3 145 + 143 none 83.14 172 72.73 4e-72 peptidyl-prolyl cis-trans isomerase 1
blastp_kegg lcl|gmx:100787030 3 145 + 143 none 83.14 172 71.33 5e-72 peptidyl-prolyl cis-trans isomerase 1-like
blastp_kegg lcl|rcu:RCOM_1598170 1 145 + 145 none 83.82 173 71.03 5e-72 cyclophilin putative (EC:5.2.1.8)
blastp_kegg lcl|cmo:103490307 4 145 + 142 none 82.56 172 73.24 9e-72 peptidyl-prolyl cis-trans isomerase
blastp_kegg lcl|mdm:103428365 3 145 + 143 none 83.14 172 72.73 9e-72 peptidyl-prolyl cis-trans isomerase 1-like
blastp_kegg lcl|pxb:103966231 4 145 + 142 none 82.56 172 73.24 1e-71 peptidyl-prolyl cis-trans isomerase
blastp_pdb 2hqj_A 3 145 + 143 Gaps:3 79.78 183 65.75 7e-64 mol:protein length:183 Cyclophilin
blastp_pdb 2igw_A 3 145 + 143 none 82.66 173 64.34 1e-62 mol:protein length:173 Peptidyl-prolyl cis-trans isomerase 3
blastp_pdb 2igv_A 3 145 + 143 none 82.66 173 64.34 1e-62 mol:protein length:173 Peptidyl-prolyl cis-trans isomerase 3
blastp_pdb 1e8k_A 3 145 + 143 none 82.66 173 64.34 1e-62 mol:protein length:173 PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 3
blastp_pdb 1e3b_A 3 145 + 143 none 82.66 173 64.34 1e-62 mol:protein length:173 CYCLOPHILIN 3
blastp_pdb 1dyw_A 3 145 + 143 none 82.66 173 64.34 1e-62 mol:protein length:173 CYCLOPHILIN 3
blastp_pdb 2x2a_B 4 145 + 142 Gaps:7 81.82 165 64.44 1e-55 mol:protein length:165 PEPTIDYL-PROLYL CIS-TRANS ISOMERASE A
blastp_pdb 2x2a_A 4 145 + 142 Gaps:7 81.82 165 64.44 1e-55 mol:protein length:165 PEPTIDYL-PROLYL CIS-TRANS ISOMERASE A
blastp_pdb 2x25_B 4 145 + 142 Gaps:7 79.88 169 64.44 1e-55 mol:protein length:169 PEPTIDYL-PROLYL CIS-TRANS ISOMERASE A
blastp_pdb 2alf_A 4 145 + 142 Gaps:7 82.32 164 64.44 2e-55 mol:protein length:164 Peptidyl-prolyl cis-trans isomerase A
blastp_uniprot_sprot sp|Q8W171|CYP1_SOYBN 4 145 + 142 none 82.56 172 73.24 4e-72 Peptidyl-prolyl cis-trans isomerase 1 OS Glycine max GN Cyp1 PE 1 SV 1
blastp_uniprot_sprot sp|Q39613|CYPH_CATRO 4 145 + 142 none 82.56 172 70.42 2e-71 Peptidyl-prolyl cis-trans isomerase OS Catharanthus roseus GN PCKR1 PE 2 SV 1
blastp_uniprot_sprot sp|P21568|CYPH_SOLLC 3 145 + 143 none 83.63 171 69.23 6e-71 Peptidyl-prolyl cis-trans isomerase OS Solanum lycopersicum GN CYP PE 2 SV 1
blastp_uniprot_sprot sp|P21569|CYPH_MAIZE 3 145 + 143 none 83.14 172 68.53 1e-69 Peptidyl-prolyl cis-trans isomerase OS Zea mays GN CYP PE 1 SV 1
blastp_uniprot_sprot sp|Q38900|CP19A_ARATH 1 145 + 145 none 83.82 173 66.90 2e-69 Peptidyl-prolyl cis-trans isomerase CYP19-1 OS Arabidopsis thaliana GN CYP19-1 PE 1 SV 1
blastp_uniprot_sprot sp|O49886|CYPH_LUPLU 3 145 + 143 none 83.14 172 68.53 1e-68 Peptidyl-prolyl cis-trans isomerase OS Lupinus luteus PE 2 SV 1
blastp_uniprot_sprot sp|Q9SKQ0|CP19B_ARATH 1 145 + 145 none 83.33 174 68.28 1e-68 Peptidyl-prolyl cis-trans isomerase CYP19-2 OS Arabidopsis thaliana GN CYP19-2 PE 1 SV 1
blastp_uniprot_sprot sp|P34790|CP18C_ARATH 5 145 + 141 none 81.98 172 68.09 5e-67 Peptidyl-prolyl cis-trans isomerase CYP18-3 OS Arabidopsis thaliana GN CYP18-3 PE 1 SV 1
blastp_uniprot_sprot sp|P52015|CYP7_CAEEL 3 145 + 143 none 83.63 171 66.43 2e-66 Peptidyl-prolyl cis-trans isomerase 7 OS Caenorhabditis elegans GN cyn-7 PE 1 SV 2
blastp_uniprot_sprot sp|P24525|CYPH_BRANA 4 145 + 142 none 83.04 171 66.20 5e-66 Peptidyl-prolyl cis-trans isomerase OS Brassica napus GN CYP PE 2 SV 2

12 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
ProSiteProfiles 8 145 138 PS50072 none Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. IPR002130
Pfam 10 145 136 PF00160 none Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD IPR002130
PANTHER 3 145 143 PTHR11071:SF197 none none none
SUPERFAMILY 3 145 143 SSF50891 none none IPR029000
ProSitePatterns 56 73 18 PS00170 none Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. IPR020892
PANTHER 3 145 143 PTHR11071 none none IPR024936
Gene3D 3 145 143 G3DSA:2.40.100.10 none none IPR029000
PRINTS 119 131 13 PR00153 none Cyclophilin peptidyl-prolyl cis-trans isomerase signature IPR002130
PRINTS 104 119 16 PR00153 none Cyclophilin peptidyl-prolyl cis-trans isomerase signature IPR002130
PRINTS 61 73 13 PR00153 none Cyclophilin peptidyl-prolyl cis-trans isomerase signature IPR002130
PRINTS 25 40 16 PR00153 none Cyclophilin peptidyl-prolyl cis-trans isomerase signature IPR002130
PRINTS 132 147 16 PR00153 none Cyclophilin peptidyl-prolyl cis-trans isomerase signature IPR002130

0 Localization

6 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2002_QTL13_peak_Bud_burst_3P Qrob_Chr10 10 s_1B1AG7_637 s_1A3A1N_709 19,44 0 49,44 lod 3 5,6
Bourran2_2002_QTL15_peak_Bud_burst_A4 Qrob_Chr10 10 v_7579_71 s_1ATZMJ_189 23,94 0 43,64 lod 3,7 5,4
Bourran2_2014_vSeqBC_3P Qrob_Chr10 10 s_1A6CK6_610 v_7092_29 4,28 0 23,27 lod 2,8619 7
Bourran2_2014_vSeqBC_A4 Qrob_Chr10 10 s_1BAM4E_1326 s_1C0HD0_1012 36,88 7,71 46,03 lod 2,6164 7,3
Champenoux_2015_nPriLBD_3P Qrob_Chr10 10 v_15000_157 v_15000_310 15,68 15,9 15,91 lod 2.4 5.5
PM_1999_QTL16_peak_Bud_burst_3P Qrob_Chr10 10 s_1B6YNI_505 s_1A1ZO_1322 7,48 0 31,48 lod 4 7,1

0 Targeting