Protein : Qrob_P0505290.2 Q. robur
Protein Identifier  ? Qrob_P0505290.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=3) K14494 - DELLA protein Gene Prediction Quality  validated
Protein length 

Sequence

Length: 587  
Kegg Orthology  K14494
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0000989 transcription factor binding transcription factor activity Interacting selectively and non-covalently with a specific transcription factor, which may be a single protein or a complex, in order to modulate transcription. A protein binding transcription factor may or may not also interact with the template nucleic acid (either DNA or RNA) as well.
GO:0005634 nucleus A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.

24 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pper:PRUPE_ppa003206mg 31 584 + 554 Gaps:39 94.27 593 75.49 0.0 hypothetical protein
blastp_kegg lcl|pop:POPTR_0005s14540g 3 585 + 583 Gaps:34 97.42 619 69.65 0.0 hypothetical protein
blastp_kegg lcl|pop:POPTR_0004s08890g 3 585 + 583 Gaps:40 99.34 607 69.49 0.0 POPTRDRAFT_555941 hypothetical protein
blastp_kegg lcl|pmum:103328576 3 584 + 582 Gaps:49 98.99 597 73.27 0.0 DELLA protein GAI
blastp_kegg lcl|pxb:103927271 3 584 + 582 Gaps:41 99.49 584 72.98 0.0 DELLA protein GAI-like
blastp_kegg lcl|pxb:103959476 25 584 + 560 Gaps:33 95.34 580 73.78 0.0 DELLA protein GAI-like
blastp_kegg lcl|mdm:103405830 25 583 + 559 Gaps:37 94.86 584 74.91 0.0 DELLA protein GAI-like
blastp_kegg lcl|mdm:103444199 25 584 + 560 Gaps:33 95.34 580 73.42 0.0 DELLA protein GAI
blastp_kegg lcl|vvi:100253268 25 584 + 560 Gaps:16 93.64 613 70.56 0.0 DELLA protein GAI1-like
blastp_kegg lcl|cit:102629959 31 586 + 556 Gaps:44 94.79 576 74.54 0.0 DELLA protein GAI-like
blastp_pdb 2zsi_B 31 168 + 138 Gaps:45 91.82 110 56.44 5e-20 mol:protein length:110 DELLA protein GAI
blastp_pdb 2zsh_B 31 168 + 138 Gaps:45 91.82 110 56.44 5e-20 mol:protein length:110 DELLA protein GAI
blastp_uniprot_sprot sp|Q84TQ7|GAI_GOSHI 3 575 + 573 Gaps:70 98.14 537 73.24 0.0 DELLA protein GAI OS Gossypium hirsutum GN GAI PE 2 SV 1
blastp_uniprot_sprot sp|Q7Y1B6|GAI_SOLLC 28 581 + 554 Gaps:42 94.22 588 70.76 0.0 DELLA protein GAI OS Solanum lycopersicum GN GAI PE 2 SV 1
blastp_uniprot_sprot sp|Q8S4W7|GAI1_VITVI 23 583 + 561 Gaps:27 95.93 590 66.78 0.0 DELLA protein GAI1 OS Vitis vinifera GN GAI1 PE 2 SV 1
blastp_uniprot_sprot sp|Q6EI06|GAIP_CUCMA 31 580 + 550 Gaps:26 93.26 579 66.67 0.0 DELLA protein GAIP OS Cucurbita maxima GN GAIP PE 2 SV 1
blastp_uniprot_sprot sp|Q5BN22|RGA2_BRACM 5 583 + 579 Gaps:79 96.72 579 64.64 0.0 DELLA protein RGA2 OS Brassica campestris GN RGA2 PE 3 SV 1
blastp_uniprot_sprot sp|Q6EI05|GAIPB_CUCMA 31 586 + 556 Gaps:21 94.21 587 64.01 0.0 DELLA protein GAIP-B OS Cucurbita maxima GN GAIPB PE 2 SV 1
blastp_uniprot_sprot sp|Q8GXW1|RGL2_ARATH 47 582 + 536 Gaps:57 91.96 547 68.59 0.0 DELLA protein RGL2 OS Arabidopsis thaliana GN RGL2 PE 1 SV 2
blastp_uniprot_sprot sp|Q9SLH3|RGA_ARATH 3 583 + 581 Gaps:62 99.32 587 62.09 0.0 DELLA protein RGA OS Arabidopsis thaliana GN RGA PE 1 SV 1
blastp_uniprot_sprot sp|Q9C8Y3|RGL1_ARATH 39 581 + 543 Gaps:64 94.52 511 70.60 0.0 DELLA protein RGL1 OS Arabidopsis thaliana GN RGL1 PE 1 SV 1
blastp_uniprot_sprot sp|Q9LQT8|GAI_ARATH 31 583 + 553 Gaps:63 97.56 533 65.96 0.0 DELLA protein GAI OS Arabidopsis thaliana GN GAI PE 1 SV 1
rpsblast_cdd gnl|CDD|202673 219 579 + 361 Gaps:14 99.73 372 52.56 1e-143 pfam03514 GRAS GRAS family transcription factor. Sequence analysis of the products of the GRAS (GAI RGA SCR) gene family indicates that they share a variable amino-terminus and a highly conserved carboxyl-terminus that contains five recognisable motifs. Proteins in the GRAS family are transcription factors that seem to be involved in development and other processes. Mutation of the SCARECROW (SCR) gene results in a radial pattern defect loss of a ground tissue layer in the root. The PAT1 protein is involved in phytochrome A signal transduction.
rpsblast_cdd gnl|CDD|152476 46 114 + 69 Gaps:6 98.65 74 69.86 1e-24 pfam12041 DELLA Transcriptional regulator DELLA protein N terminal. Gibberellins are plant hormones which have great impact on growth signalling. DELLA proteins are transcriptional regulators of growth related proteins which are downregulated when gibberellins bind to their receptor GID1. GID1 forms a complex with DELLA proteins and signals them towards 26S proteasome. The N terminal of DELLA proteins contains conserved DELLA and VHYNP motifs which are important for GID1 binding and proteolysis of the DELLA proteins.

5 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 46 110 65 PF12041 none Transcriptional regulator DELLA protein N terminal IPR021914
ProSiteProfiles 193 559 367 PS50985 none GRAS family profile. IPR005202
PANTHER 45 584 540 PTHR31636 none none none
PANTHER 45 584 540 PTHR31636:SF7 none none IPR030006
Pfam 219 580 362 PF03514 none GRAS domain family IPR005202

0 Localization

0 Qtllist

0 Targeting