Protein : Qrob_P0503460.2 Q. robur
Protein Identifier  ? Qrob_P0503460.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=2) K09313 - homeobox protein cut-like Gene Prediction Quality  validated
Protein length 

Sequence

Length: 277  
Kegg Orthology  K09313
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0006891 intra-Golgi vesicle-mediated transport The directed movement of substances within the Golgi, mediated by small transport vesicles. These either fuse with the cis-Golgi or with each other to form the membrane stacks known as the cis-Golgi reticulum (network).
GO:0030173 integral component of Golgi membrane The component of the Golgi membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.

19 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|tcc:TCM_012282 9 276 + 268 Gaps:34 44.22 683 76.82 1e-156 CCAAT-displacement protein alternatively spliced product isoform 1
blastp_kegg lcl|pmum:103335541 9 276 + 268 Gaps:34 44.22 683 76.16 3e-156 protein CASP
blastp_kegg lcl|pper:PRUPE_ppa002344mg 9 276 + 268 Gaps:36 44.38 685 76.32 4e-155 hypothetical protein
blastp_kegg lcl|rcu:RCOM_1617420 9 276 + 268 Gaps:35 44.13 682 77.41 7e-154 Protein CASP putative
blastp_kegg lcl|mdm:103449813 9 276 + 268 Gaps:34 44.22 683 76.16 1e-153 protein CASP
blastp_kegg lcl|fve:101315049 9 276 + 268 Gaps:34 44.41 680 74.83 2e-153 protein CASP-like
blastp_kegg lcl|pxb:103936659 9 276 + 268 Gaps:34 44.28 682 75.83 2e-153 protein CASP
blastp_kegg lcl|pvu:PHAVU_004G1601000 9 276 + 268 Gaps:36 63.33 480 74.67 3e-153 hypothetical protein
blastp_kegg lcl|gmx:100780863 9 275 + 267 Gaps:36 43.91 690 74.92 1e-152 protein CASP-like
blastp_kegg lcl|gmx:100784316 9 275 + 267 Gaps:36 43.79 692 74.59 3e-151 protein CASP-like
blastp_uniprot_sprot sp|Q9LS42|CASP_ARATH 9 276 + 268 Gaps:34 43.83 689 71.52 6e-145 Protein CASP OS Arabidopsis thaliana GN CASP PE 1 SV 2
blastp_uniprot_sprot sp|Q5R8V1|CASP_PONAB 8 251 + 244 Gaps:26 39.82 678 31.48 1e-27 Protein CASP OS Pongo abelii GN CUTL1 PE 2 SV 1
blastp_uniprot_sprot sp|Q13948|CASP_HUMAN 8 251 + 244 Gaps:26 39.82 678 31.85 1e-27 Protein CASP OS Homo sapiens GN CUX1 PE 1 SV 2
blastp_uniprot_sprot sp|P70403|CASP_MOUSE 11 251 + 241 Gaps:34 39.38 678 32.21 1e-25 Protein CASP OS Mus musculus GN Cux1 PE 2 SV 2
blastp_uniprot_sprot sp|Q8IA98|CASP_CAEEL 23 251 + 229 Gaps:19 35.43 621 28.18 9e-15 Protein CASP OS Caenorhabditis elegans GN ceh-44 PE 3 SV 1
blastp_uniprot_sprot sp|P34237|CASP_YEAST 127 261 + 135 Gaps:29 23.56 679 31.25 1e-14 Protein CASP OS Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN COY1 PE 1 SV 2
blastp_uniprot_sprot sp|O59795|CASP_SCHPO 25 250 + 226 Gaps:41 40.28 633 26.27 2e-09 Protein CASP OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN coy1 PE 3 SV 1
rpsblast_cdd gnl|CDD|203868 58 257 + 200 Gaps:46 99.59 245 32.79 2e-48 pfam08172 CASP_C CASP C terminal. This domain is the C-terminal region of the CASP family of proteins. It is a Golgi membrane protein which is thought to have a role in vesicle transport.
rpsblast_kog gnl|CDD|36181 11 262 + 252 Gaps:25 42.13 629 42.26 3e-56 KOG0963 KOG0963 KOG0963 Transcription factor/CCAAT displacement protein CDP1 [Transcription].

8 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 227 248 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 1 226 226 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Coils 44 86 43 Coil none none none
PANTHER 9 254 246 PTHR14043 none none none
Coils 139 174 36 Coil none none none
Phobius 249 276 28 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Pfam 197 257 61 PF08172 none CASP C terminal IPR012955
Pfam 58 191 134 PF08172 none CASP C terminal IPR012955

1 Localization

Analysis Start End Length
TMHMM 231 253 22

10 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2004_QTL1_peak_Bud_burst_A4 Qrob_Chr01 1 s_1AMVCC_444 s_1BE1VC_321 4 0 31 lod 3,2 7,4
Bourran2_2003_QTL8_peak_Bud_burst_A4 Qrob_Chr01 1 s_1AH7I_610 s_1BE1VC_321 4,6 0 28 lod 3,5 7,4
Bourran2_2007_QTL6_peak_Bud_burst_3P Qrob_Chr01 1 s_1BE1VC_321 s_1A5JRZ_890 5 0 25 lod 2,4 6
Bourran2_2014_nEpiBC_3P Qrob_Chr01 1 v_1588_550 s_1AZJRA_1600 30,48 9,48 43,98 lod 2,3642 6,3
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2015_rEpiBC_3P Qrob_Chr08 8 s_A9TNV_543 v_11837_70 9,93 9,83 11,15 lod 3.3 7.3
Bourran2_2014_nSeqBC*_A4 Qrob_Chr01 1 s_1CFE4C_2114 s_1BDNCB_819 15,25 2 28,5 lod 2,9903 8,3

0 Targeting