Protein : Qrob_P0503430.2 Q. robur
Protein Identifier  ? Qrob_P0503430.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=1) PTHR17224:SF1 - PEPTIDYL-TRNA HYDROLASE Code Enzyme  EC:3.1.1.29
Gene Prediction Quality  validated Protein length 

Sequence

Length: 113  
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0 Synonyms

1 GO Terms

Identifier Name Description
GO:0004045 aminoacyl-tRNA hydrolase activity Catalysis of the reaction: N-substituted aminoacyl-tRNA + H2O = N-substituted amino acid + tRNA.

37 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pmum:103342189 1 81 + 81 none 30.92 262 90.12 3e-45 peptidyl-tRNA hydrolase chloroplastic
blastp_kegg lcl|pper:PRUPE_ppa010131mg 1 81 + 81 none 30.92 262 90.12 3e-45 hypothetical protein
blastp_kegg lcl|mdm:103437973 1 81 + 81 none 31.40 258 88.89 1e-44 peptidyl-tRNA hydrolase chloroplastic-like
blastp_kegg lcl|pxb:103938598 1 81 + 81 none 31.40 258 87.65 2e-44 peptidyl-tRNA hydrolase chloroplastic-like
blastp_kegg lcl|pxb:103929794 1 81 + 81 none 30.68 264 86.42 6e-44 peptidyl-tRNA hydrolase mitochondrial-like
blastp_kegg lcl|pxb:103929657 1 81 + 81 none 30.68 264 86.42 6e-44 peptidyl-tRNA hydrolase mitochondrial-like
blastp_kegg lcl|cic:CICLE_v10021677mg 1 82 + 82 none 30.48 269 84.15 8e-44 hypothetical protein
blastp_kegg lcl|cit:102620100 1 82 + 82 none 30.48 269 84.15 1e-43 peptidyl-tRNA hydrolase chloroplastic-like
blastp_kegg lcl|mdm:103455485 1 81 + 81 none 30.68 264 85.19 2e-43 peptidyl-tRNA hydrolase mitochondrial-like
blastp_kegg lcl|rcu:RCOM_1617410 1 80 + 80 none 29.41 272 87.50 9e-43 peptidyl-tRNA hydrolase putative (EC:3.1.1.29)
blastp_pdb 1ryn_A 1 79 + 79 none 39.11 202 45.57 4e-18 mol:protein length:202 protein CRS2
blastp_pdb 1ryb_A 1 73 + 73 none 35.61 205 46.58 3e-17 mol:protein length:205 CRS2
blastp_pdb 1rym_A 1 73 + 73 none 34.43 212 46.58 3e-17 mol:protein length:212 protein CRS2
blastp_pdb 2jrc_A 1 82 + 82 Gaps:1 39.71 204 35.80 2e-10 mol:protein length:204 Peptidyl-tRNA hydrolase
blastp_pdb 3td6_A 1 74 + 74 Gaps:1 38.22 191 36.99 5e-10 mol:protein length:191 Peptidyl-tRNA hydrolase
blastp_pdb 3td2_A 1 74 + 74 Gaps:1 38.22 191 36.99 5e-10 mol:protein length:191 Peptidyl-tRNA hydrolase
blastp_pdb 3tcn_B 1 74 + 74 Gaps:1 38.22 191 36.99 5e-10 mol:protein length:191 Peptidyl-tRNA hydrolase
blastp_pdb 3tcn_A 1 74 + 74 Gaps:1 38.22 191 36.99 5e-10 mol:protein length:191 Peptidyl-tRNA hydrolase
blastp_pdb 3tck_A 1 74 + 74 Gaps:1 38.22 191 36.99 5e-10 mol:protein length:191 Peptidyl-tRNA hydrolase
blastp_pdb 2z2k_A 1 74 + 74 Gaps:1 38.22 191 36.99 5e-10 mol:protein length:191 Peptidyl-tRNA hydrolase
blastp_uniprot_sprot sp|Q8GW64|PTHC_ARATH 1 82 + 82 none 28.47 288 75.61 6e-37 Peptidyl-tRNA hydrolase chloroplastic OS Arabidopsis thaliana GN At1g18440 PE 2 SV 2
blastp_uniprot_sprot sp|Q5N9Q7|PTHM_ORYSJ 1 82 + 82 none 32.80 250 69.51 1e-34 Peptidyl-tRNA hydrolase mitochondrial OS Oryza sativa subsp. japonica GN Os01g0693900 PE 2 SV 1
blastp_uniprot_sprot sp|Q6NLS8|PTHM_ARATH 1 86 + 86 none 39.27 219 39.53 4e-17 Peptidyl-tRNA hydrolase mitochondrial OS Arabidopsis thaliana GN At5g19830 PE 2 SV 1
blastp_uniprot_sprot sp|Q9M5P4|CRS2_MAIZE 1 73 + 73 none 28.52 256 46.58 2e-16 Chloroplastic group IIB intron splicing facilitator CRS2 chloroplastic OS Zea mays GN CRS2 PE 1 SV 1
blastp_uniprot_sprot sp|Q9LF14|CRS2B_ARATH 1 73 + 73 none 30.42 240 43.84 9e-15 Chloroplastic group IIB intron splicing facilitator CRS2-B chloroplastic OS Arabidopsis thaliana GN CRS2B PE 2 SV 1
blastp_uniprot_sprot sp|Q5ZCL8|CRS2_ORYSJ 1 68 + 68 none 26.25 259 42.65 5e-14 Chloroplastic group IIB intron splicing facilitator CRS2 chloroplastic OS Oryza sativa subsp. japonica GN Os01g0132800 PE 2 SV 1
blastp_uniprot_sprot sp|Q9FKN4|CRS2A_ARATH 1 73 + 73 none 29.67 246 41.10 2e-13 Chloroplastic group IIB intron splicing facilitator CRS2-A chloroplastic OS Arabidopsis thaliana GN CRS2A PE 2 SV 1
blastp_uniprot_sprot sp|Q0S4R3|PTH_RHOSR 5 68 + 64 none 33.68 190 43.75 8e-13 Peptidyl-tRNA hydrolase OS Rhodococcus sp. (strain RHA1) GN pth PE 3 SV 1
blastp_uniprot_sprot sp|C1AY15|PTH_RHOOB 5 68 + 64 none 33.68 190 43.75 9e-13 Peptidyl-tRNA hydrolase OS Rhodococcus opacus (strain B4) GN pth PE 3 SV 1
blastp_uniprot_sprot sp|B8HFE2|PTH_ARTCA 11 76 + 66 none 33.67 196 42.42 3e-12 Peptidyl-tRNA hydrolase OS Arthrobacter chlorophenolicus (strain A6 / ATCC 700700 / DSM 12829 / JCM 12360) GN pth PE 3 SV 1

5 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SUPERFAMILY 1 74 74 SSF53178 none none IPR001328
PANTHER 1 82 82 PTHR17224 none none IPR001328
Gene3D 1 74 74 G3DSA:3.40.50.1470 none none IPR001328
PANTHER 1 82 82 PTHR17224:SF1 none none none
Pfam 1 70 70 PF01195 none Peptidyl-tRNA hydrolase IPR001328

0 Localization

10 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2004_QTL1_peak_Bud_burst_A4 Qrob_Chr01 1 s_1AMVCC_444 s_1BE1VC_321 4 0 31 lod 3,2 7,4
Bourran2_2003_QTL8_peak_Bud_burst_A4 Qrob_Chr01 1 s_1AH7I_610 s_1BE1VC_321 4,6 0 28 lod 3,5 7,4
Bourran2_2007_QTL6_peak_Bud_burst_3P Qrob_Chr01 1 s_1BE1VC_321 s_1A5JRZ_890 5 0 25 lod 2,4 6
Bourran2_2014_nEpiBC_3P Qrob_Chr01 1 v_1588_550 s_1AZJRA_1600 30,48 9,48 43,98 lod 2,3642 6,3
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2015_rEpiBC_3P Qrob_Chr08 8 s_A9TNV_543 v_11837_70 9,93 9,83 11,15 lod 3.3 7.3
Bourran2_2014_nSeqBC*_A4 Qrob_Chr01 1 s_1CFE4C_2114 s_1BDNCB_819 15,25 2 28,5 lod 2,9903 8,3

0 Targeting