Protein : Qrob_P0500950.2 Q. robur
Protein Identifier  ? Qrob_P0500950.2 Organism . Name  Quercus robur
Score  98.0 Score Type  egn
Protein Description  (M=2) PTHR12100 - SEC10 Gene Prediction Quality  validated
Protein length 

Sequence

Length: 247  
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0005737 cytoplasm All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
GO:0006887 exocytosis A process of secretion by a cell that results in the release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle by fusion of the vesicle with the plasma membrane of a cell. This is the process in which most molecules are secreted from eukaryotic cells.
GO:0048278 vesicle docking The initial attachment of a transport vesicle membrane to the target membrane, mediated by proteins protruding from the membrane of the vesicle and the target membrane. Docking requires only that the two membranes come close enough for these proteins to interact and adhere.

13 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pop:POPTR_0014s08590g 1 243 + 243 Gaps:27 31.98 838 74.63 7e-126 POPTRDRAFT_823992 exocyst complex component Sec10-related family protein
blastp_kegg lcl|csv:101217875 1 243 + 243 Gaps:29 31.98 838 75.00 1e-124 exocyst complex component 5-like
blastp_kegg lcl|mdm:103439168 1 243 + 243 Gaps:27 32.18 839 76.30 3e-124 exocyst complex component SEC10-like
blastp_kegg lcl|cmo:103483244 1 243 + 243 Gaps:29 31.98 838 74.63 1e-123 exocyst complex component SEC10
blastp_kegg lcl|vvi:100260245 1 243 + 243 Gaps:24 31.94 836 77.53 1e-123 exocyst complex component 5-like
blastp_kegg lcl|pper:PRUPE_ppa001390mg 1 243 + 243 Gaps:33 32.14 840 76.67 2e-123 hypothetical protein
blastp_kegg lcl|pxb:103956325 1 243 + 243 Gaps:27 32.18 839 75.56 9e-123 exocyst complex component SEC10-like
blastp_kegg lcl|rcu:RCOM_1616650 1 243 + 243 Gaps:29 31.89 834 73.68 7e-122 sec10 putative
blastp_kegg lcl|pmum:103332065 1 243 + 243 Gaps:27 32.14 840 75.56 2e-121 exocyst complex component SEC10
blastp_kegg lcl|fve:101308500 1 243 + 243 Gaps:30 31.90 837 72.66 2e-119 exocyst complex component 5-like
blastp_uniprot_sprot sp|Q8RVQ5|SEC10_ARATH 12 243 + 232 Gaps:26 30.55 825 75.00 4e-115 Exocyst complex component SEC10 OS Arabidopsis thaliana GN SEC10 PE 1 SV 2
blastp_uniprot_sprot sp|Q2QV94|EXOC5_ORYSJ 20 243 + 224 Gaps:29 28.41 806 70.74 1e-93 Exocyst complex component 5 OS Oryza sativa subsp. japonica GN SEC10 PE 2 SV 1
rpsblast_cdd gnl|CDD|203629 138 243 + 106 Gaps:34 16.06 685 29.09 3e-14 pfam07393 Sec10 Exocyst complex component Sec10. This family contains the Sec10 component (approximately 650 residues long) of the eukaryotic exocyst complex which specifically affects the synthesis and delivery of secretory and basolateral plasma membrane proteins.

3 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 139 242 104 PF07393 none Exocyst complex component Sec10 IPR009976
PANTHER 3 243 241 PTHR12100:SF0 none none none
PANTHER 3 243 241 PTHR12100 none none IPR009976

0 Localization

6 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nSeqBC_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,06 25,47 27,72 lod 3.6 7.1
Bourran2_2015_nP_3P Qrob_Chr12 12 v_10140_295 v_838_303 16 14,69 18,01 lod 5.1 13.7
Bourran1_2004_QTL4_peak_Bud_burst_3P Qrob_Chr04 4 s_1AHUWN_1101 s_1BRNG7_1618 30,55 0 47,55 lod 2,8 7,4
Bourran2_2002_QTL10_peak_Bud_burst_A4 Qrob_Chr04 4 s_1B59MJ_737 s_1BGLSD_999 15,86 0 41,66 lod 2,8 4
Bourran1_2000_QTL3_peak_Bud_burst_3P Qrob_Chr04 4 s_1A6DJQ_418 s_1A1PEC_1268 23,09 9,09 44,09 lod 2,3 6,8
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL7_d13Cf Qrob_Chr04 4 s_1B91MJ_705 s_1AHIKX_640 33.92 12,11 48,31 lod 6.1865 0.023

0 Targeting