Protein : Qrob_P0492730.2 Q. robur
Protein Identifier  ? Qrob_P0492730.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=82) PF00190 - Cupin Gene Prediction Quality  validated
Protein length 

Sequence

Length: 221  
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0045735 nutrient reservoir activity Functions in the storage of nutritious substrates.
GO:0030145 manganese ion binding Interacting selectively and non-covalently with manganese (Mn) ions.

28 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|vvi:100261406 1 220 + 220 Gaps:4 100.00 220 75.00 3e-114 germin-like protein subfamily 1 member 14
blastp_kegg lcl|vvi:100246011 1 220 + 220 Gaps:4 100.00 220 75.00 1e-113 germin-like protein subfamily 1 member 13
blastp_kegg lcl|vvi:100233016 1 219 + 219 Gaps:4 99.55 220 75.34 1e-113 GER4 germin-like protein 4
blastp_kegg lcl|vvi:100251155 1 220 + 220 Gaps:4 100.00 220 75.00 3e-113 germin-like protein subfamily 1 member 14
blastp_kegg lcl|tcc:TCM_026075 3 220 + 218 Gaps:3 96.88 224 76.04 2e-112 RmlC-like cupins superfamily protein
blastp_kegg lcl|vvi:100266609 1 220 + 220 Gaps:4 100.00 220 74.09 3e-111 germin-like protein subfamily 1 member 14
blastp_kegg lcl|vvi:100256308 1 220 + 220 Gaps:4 100.00 220 73.64 5e-111 germin-like protein subfamily 1 member 14
blastp_kegg lcl|vvi:100258041 1 220 + 220 Gaps:4 99.55 221 74.09 1e-110 germin-like protein subfamily 1 member 17
blastp_kegg lcl|vvi:100244270 1 220 + 220 Gaps:5 100.00 221 74.21 2e-110 germin-like protein subfamily 1 member 14
blastp_kegg lcl|pper:PRUPE_ppa016529mg 1 220 + 220 Gaps:5 97.79 226 76.47 3e-110 hypothetical protein
blastp_pdb 2et7_A 22 220 + 199 Gaps:6 98.01 201 50.25 1e-56 mol:protein length:201 Oxalate oxidase 1
blastp_pdb 2ete_B 22 220 + 199 Gaps:6 98.01 201 49.75 1e-55 mol:protein length:201 Oxalate oxidase 1
blastp_pdb 2ete_A 22 220 + 199 Gaps:6 98.01 201 49.75 1e-55 mol:protein length:201 Oxalate oxidase 1
blastp_pdb 2et1_A 22 220 + 199 Gaps:6 98.01 201 49.24 4e-55 mol:protein length:201 Oxalate oxidase 1
blastp_pdb 1fi2_A 22 220 + 199 Gaps:6 98.01 201 49.24 4e-55 mol:protein length:201 OXALATE OXIDASE
blastp_uniprot_sprot sp|P92996|GL120_ARATH 6 220 + 215 Gaps:4 95.95 222 70.42 8e-105 Germin-like protein subfamily 1 member 20 OS Arabidopsis thaliana GN GLP5A PE 1 SV 1
blastp_uniprot_sprot sp|Q9FID0|GL114_ARATH 6 220 + 215 Gaps:3 96.40 222 71.03 9e-105 Germin-like protein subfamily 1 member 14 OS Arabidopsis thaliana GN At5g39110 PE 3 SV 1
blastp_uniprot_sprot sp|P92999|GL118_ARATH 6 220 + 215 Gaps:4 95.95 222 70.42 1e-104 Germin-like protein subfamily 1 member 18 OS Arabidopsis thaliana GN GLP2A PE 2 SV 2
blastp_uniprot_sprot sp|Q9FIC8|GL116_ARATH 6 220 + 215 Gaps:4 95.95 222 69.01 1e-103 Germin-like protein subfamily 1 member 16 OS Arabidopsis thaliana GN At5g39130 PE 2 SV 1
blastp_uniprot_sprot sp|P92997|GL113_ARATH 6 220 + 215 Gaps:3 96.40 222 69.63 2e-103 Germin-like protein subfamily 1 member 13 OS Arabidopsis thaliana GN GLP6 PE 2 SV 2
blastp_uniprot_sprot sp|Q9SFF9|GL17_ARATH 11 220 + 210 Gaps:4 90.83 229 73.56 3e-103 Germin-like protein subfamily 1 member 7 OS Arabidopsis thaliana GN At3g05950 PE 2 SV 1
blastp_uniprot_sprot sp|Q9FIC9|GL115_ARATH 6 220 + 215 Gaps:4 96.38 221 70.42 3e-101 Germin-like protein subfamily 1 member 15 OS Arabidopsis thaliana GN At5g39120 PE 2 SV 1
blastp_uniprot_sprot sp|Q9FL89|GL119_ARATH 6 220 + 215 Gaps:4 96.38 221 70.89 3e-101 Germin-like protein subfamily 1 member 19 OS Arabidopsis thaliana GN At5g39180 PE 2 SV 1
blastp_uniprot_sprot sp|Q9FIC6|GL117_ARATH 6 220 + 215 Gaps:4 96.38 221 70.89 3e-101 Germin-like protein subfamily 1 member 17 OS Arabidopsis thaliana GN At5g39150 PE 2 SV 1
blastp_uniprot_sprot sp|Q9LEA7|GL18_ARATH 4 220 + 217 Gaps:3 97.30 222 66.20 2e-96 Germin-like protein subfamily 1 member 8 OS Arabidopsis thaliana GN GLP9 PE 2 SV 2
rpsblast_cdd gnl|CDD|201069 65 214 + 150 Gaps:14 99.28 139 35.51 4e-30 pfam00190 Cupin_1 Cupin. This family represents the conserved barrel domain of the 'cupin' superfamily ('cupa' is the Latin term for a small barrel). This family contains 11S and 7S plant seed storage proteins and germins. Plant seed storage proteins provide the major nitrogen source for the developing plant.
rpsblast_cdd gnl|CDD|197904 69 214 + 146 Gaps:2 98.63 146 35.42 4e-28 smart00835 Cupin_1 Cupin. This family represents the conserved barrel domain of the 'cupin' superfamily ('cupa' is the Latin term for a small barrel). This family contains 11S and 7S plant seed storage proteins and germins. Plant seed storage proteins provide the major nitrogen source for the developing plant.
rpsblast_cdd gnl|CDD|32101 88 174 + 87 Gaps:7 61.07 131 30.00 1e-07 COG1917 COG1917 Uncharacterized conserved protein contains double-stranded beta-helix domain [Function unknown].

14 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
ProSitePatterns 107 120 14 PS00725 none Germin family signature. IPR019780
Gene3D 22 219 198 G3DSA:2.60.120.10 none none IPR014710
Phobius 1 5 5 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
PANTHER 1 220 220 PTHR31238 none none none
Phobius 22 220 199 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
PRINTS 112 132 21 PR00325 none Germin signature IPR001929
PRINTS 177 192 16 PR00325 none Germin signature IPR001929
PRINTS 144 164 21 PR00325 none Germin signature IPR001929
SUPERFAMILY 23 219 197 SSF51182 none none IPR011051
Phobius 6 16 11 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
Phobius 1 21 21 SIGNAL_PEPTIDE none Signal peptide region none
Phobius 17 21 5 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
SMART 66 214 149 SM00835 none Cupin IPR006045
Pfam 66 212 147 PF00190 none Cupin IPR006045

3 Localization

Analysis Start End Length
SignalP_EUK 1 21 20
SignalP_GRAM_NEGATIVE 1 21 20
SignalP_GRAM_POSITIVE 1 21 20

3 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2002_QTL17_peak_Bud_burst_A4 Qrob_Chr12 12 s_1CTJ3J_556 s_1CTJ3J_556 0 0 25 lod 2,9 6
Bourran2_2014_nSeqBC_3P Qrob_Chr12 12 s_1EO8V5_710 s_1A2VMU_355 11,04 0 32,58 lod 1,7196 4,7

0 Targeting