Protein : Qrob_P0492710.2 Q. robur
Protein Identifier  ? Qrob_P0492710.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=3) K11518 - mitochondrial import receptor subunit TOM40 Gene Prediction Quality  validated
Protein length 

Sequence

Length: 177  
Kegg Orthology  K11518
Paste the following link
Lists
This Protein isn't in any lists. Upload a list.

Sequence Feature Displayer

Protein Sequence Displayer

J Browse Displayer

0 Synonyms

2 GO Terms

Identifier Name Description
GO:0055085 transmembrane transport The process in which a solute is transported from one side of a membrane to the other.
GO:0005741 mitochondrial outer membrane The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope.

16 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|mdm:103444413 4 158 + 155 Gaps:1 98.72 156 80.52 3e-88 mitochondrial import receptor subunit TOM40-1-like
blastp_kegg lcl|pmum:103322524 19 158 + 140 none 44.87 312 88.57 4e-88 mitochondrial import receptor subunit TOM40-1-like
blastp_kegg lcl|pper:PRUPE_ppa008962mg 19 158 + 140 none 44.87 312 88.57 4e-88 hypothetical protein
blastp_kegg lcl|pxb:103942832 4 158 + 155 Gaps:1 80.63 191 81.17 5e-88 mitochondrial import receptor subunit TOM40-1-like
blastp_kegg lcl|pxb:103932065 1 158 + 158 Gaps:1 50.32 312 80.89 3e-87 mitochondrial import receptor subunit TOM40-1-like
blastp_kegg lcl|mdm:103449844 1 158 + 158 Gaps:1 50.32 312 80.89 3e-87 mitochondrial import receptor subunit TOM40-1-like
blastp_kegg lcl|cmo:103494505 17 158 + 142 none 44.79 317 85.92 2e-86 mitochondrial import receptor subunit TOM40-1-like
blastp_kegg lcl|cic:CICLE_v10032173mg 7 158 + 152 Gaps:4 47.59 311 83.78 6e-85 hypothetical protein
blastp_kegg lcl|cit:102616410 7 158 + 152 Gaps:4 47.59 311 83.78 6e-85 mitochondrial import receptor subunit TOM40-1-like
blastp_kegg lcl|rcu:RCOM_1454110 4 157 + 154 Gaps:2 49.35 308 78.95 1e-84 mitochondrial import receptor subunit tom40 putative
blastp_uniprot_sprot sp|Q9LHE5|TO401_ARATH 22 155 + 134 Gaps:1 43.69 309 71.85 1e-66 Mitochondrial import receptor subunit TOM40-1 OS Arabidopsis thaliana GN TOM40-1 PE 1 SV 3
blastp_uniprot_sprot sp|Q9SX55|TO402_ARATH 8 157 + 150 Gaps:3 48.71 310 62.25 3e-58 Probable mitochondrial import receptor subunit TOM40-2 OS Arabidopsis thaliana GN TOM40-2 PE 2 SV 3
blastp_uniprot_sprot sp|Q6P825|TOM40_XENTR 7 135 + 129 Gaps:25 35.71 336 32.50 5e-07 Mitochondrial import receptor subunit TOM40 homolog OS Xenopus tropicalis GN tomm40 PE 2 SV 1
rpsblast_cdd gnl|CDD|132766 32 158 + 127 Gaps:14 41.94 279 37.61 3e-30 cd07305 Porin3_Tom40 Translocase of outer mitochondrial membrane 40 (Tom40). Tom40 forms a channel in the mitochondrial outer membrane with a pore about 1.5 to 2.5 nanometers wide. It functions as a transport channel for unfolded protein chains and forms a complex with Tom5 Tom6 Tom7 and Tom22. The primary receptors Tom20 and Tom70 recruit the unfolded precursor protein from the mitochondrial-import stimulating factor (MSF) or cytosolic Hsc70. The precursor passes through the Tom40 channel and through another channel in the inner membrane formed by Tim23 to be finally translocated into the mitochondrial matrix. The process depends on a proton motive force across the inner membrane and requires a contact site where the outer and inner membranes come close. Tom40 is also involved in inserting outer membrane proteins into the membrane most likely not via a lateral opening in the pore but by transfering precursor proteins to an outer membrane sorting and assembly machinery.
rpsblast_cdd gnl|CDD|201807 34 156 + 123 Gaps:20 42.28 272 28.70 2e-16 pfam01459 Porin_3 Eukaryotic porin.
rpsblast_kog gnl|CDD|38506 25 156 + 132 Gaps:6 44.81 308 27.54 3e-27 KOG3296 KOG3296 KOG3296 Translocase of outer mitochondrial membrane complex subunit TOM40 [Intracellular trafficking secretion and vesicular transport].

4 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 34 160 127 PF01459 none Eukaryotic porin IPR027246
PANTHER 7 156 150 PTHR10802 none none none
PANTHER 7 156 150 PTHR10802:SF2 none none none
Gene3D 22 159 138 G3DSA:2.40.160.10 none none IPR023614

0 Localization

3 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2002_QTL17_peak_Bud_burst_A4 Qrob_Chr12 12 s_1CTJ3J_556 s_1CTJ3J_556 0 0 25 lod 2,9 6
Bourran2_2014_nSeqBC_3P Qrob_Chr12 12 s_1EO8V5_710 s_1A2VMU_355 11,04 0 32,58 lod 1,7196 4,7

0 Targeting