Protein : Qrob_P0486550.2 Q. robur
Protein Identifier  ? Qrob_P0486550.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=1) K08916 - light-harvesting complex II chlorophyll a/b binding protein 5 Gene Prediction Quality  validated
Protein length 

Sequence

Length: 289  
Kegg Orthology  K08916
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0016020 membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
GO:0009765 photosynthesis, light harvesting Absorption and transfer of the energy absorbed from light photons between photosystem reaction centers.

40 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cit:102609195 1 288 + 288 Gaps:5 100.00 293 86.69 3e-179 chlorophyll a-b binding protein CP26 chloroplastic-like
blastp_kegg lcl|rcu:RCOM_0868050 1 288 + 288 Gaps:4 100.00 292 87.67 5e-175 chlorophyll A/B binding protein putative
blastp_kegg lcl|pda:103701619 12 288 + 277 Gaps:4 96.23 292 86.12 9e-174 chlorophyll a-b binding protein CP26 chloroplastic-like
blastp_kegg lcl|gmx:100820327 1 288 + 288 Gaps:7 100.00 287 88.85 3e-173 chlorophyll a-b binding protein CP26 chloroplastic-like
blastp_kegg lcl|gmx:100817348 1 288 + 288 Gaps:8 91.72 314 86.81 3e-171 chlorophyll a-b binding protein CP26 chloroplastic-like
blastp_kegg lcl|cam:101494343 13 288 + 276 Gaps:1 95.85 289 87.36 5e-171 chlorophyll a-b binding protein CP26 chloroplastic-like
blastp_kegg lcl|vvi:100246457 14 288 + 275 Gaps:2 95.52 290 87.73 8e-171 chlorophyll a-b binding protein CP26 chloroplastic-like
blastp_kegg lcl|pvu:PHAVU_007G113000g 1 288 + 288 Gaps:6 100.00 286 84.27 2e-168 hypothetical protein
blastp_kegg lcl|tcc:TCM_036047 14 288 + 275 Gaps:3 95.53 291 86.33 3e-167 Light harvesting complex of photosystem II 5 isoform 1
blastp_kegg lcl|crb:CARUB_v10001659mg 11 288 + 278 Gaps:2 99.64 281 87.14 4e-167 hypothetical protein
blastp_pdb 1vcr_A 70 273 + 204 Gaps:9 88.36 232 55.12 5e-65 mol:protein length:232 Chlorophyll a-b binding protein AB80
blastp_pdb 2bhw_C 70 273 + 204 Gaps:9 88.36 232 55.12 5e-65 mol:protein length:232 CHLOROPHYLL A-B BINDING PROTEIN AB80
blastp_pdb 2bhw_B 70 273 + 204 Gaps:9 88.36 232 55.12 5e-65 mol:protein length:232 CHLOROPHYLL A-B BINDING PROTEIN AB80
blastp_pdb 2bhw_A 70 273 + 204 Gaps:9 88.36 232 55.12 5e-65 mol:protein length:232 CHLOROPHYLL A-B BINDING PROTEIN AB80
blastp_pdb 1rwt_J 70 273 + 204 Gaps:9 88.36 232 54.63 1e-63 mol:protein length:232 Chlorophyll A-B binding protein chloroplast
blastp_pdb 1rwt_I 70 273 + 204 Gaps:9 88.36 232 54.63 1e-63 mol:protein length:232 Chlorophyll A-B binding protein chloroplast
blastp_pdb 1rwt_H 70 273 + 204 Gaps:9 88.36 232 54.63 1e-63 mol:protein length:232 Chlorophyll A-B binding protein chloroplast
blastp_pdb 1rwt_G 70 273 + 204 Gaps:9 88.36 232 54.63 1e-63 mol:protein length:232 Chlorophyll A-B binding protein chloroplast
blastp_pdb 1rwt_F 70 273 + 204 Gaps:9 88.36 232 54.63 1e-63 mol:protein length:232 Chlorophyll A-B binding protein chloroplast
blastp_pdb 1rwt_E 70 273 + 204 Gaps:9 88.36 232 54.63 1e-63 mol:protein length:232 Chlorophyll A-B binding protein chloroplast
blastp_uniprot_sprot sp|Q9XF89|CB5_ARATH 11 288 + 278 Gaps:1 99.64 280 84.23 7e-155 Chlorophyll a-b binding protein CP26 chloroplastic OS Arabidopsis thaliana GN LHCB5 PE 2 SV 1
blastp_uniprot_sprot sp|P12330|CB21_ORYSJ 23 273 + 251 Gaps:15 92.83 265 53.25 3e-68 Chlorophyll a-b binding protein 1 chloroplastic OS Oryza sativa subsp. japonica GN CAB1R PE 2 SV 2
blastp_uniprot_sprot sp|P27517|CB2_DUNTE 69 273 + 205 Gaps:9 83.00 253 53.33 2e-66 Chlorophyll a-b binding protein of LHCII type I chloroplastic OS Dunaliella tertiolecta PE 2 SV 1
blastp_uniprot_sprot sp|P15194|CB2B_PINSY 58 273 + 216 Gaps:9 79.20 274 53.00 6e-66 Chlorophyll a-b binding protein type 2 member 1B chloroplastic OS Pinus sylvestris PE 2 SV 1
blastp_uniprot_sprot sp|P22686|CB2_CHLMO 43 273 + 231 Gaps:8 91.02 256 50.21 9e-66 Chlorophyll a-b binding protein of LHCII type I chloroplastic OS Chlamydomonas moewusii PE 2 SV 1
blastp_uniprot_sprot sp|P92919|CB23_APIGR 57 273 + 217 Gaps:11 81.82 264 52.78 2e-65 Chlorophyll a-b binding protein chloroplastic OS Apium graveolens GN LHC0 PE 1 SV 1
blastp_uniprot_sprot sp|P27490|CB28_PEA 70 273 + 204 Gaps:9 76.49 268 55.61 2e-65 Chlorophyll a-b binding protein 8 chloroplastic OS Pisum sativum GN CAB8 PE 1 SV 1
blastp_uniprot_sprot sp|P15193|CB2A_PINSY 70 273 + 204 Gaps:9 73.74 278 55.61 2e-65 Chlorophyll a-b binding protein type 2 member 1A chloroplastic OS Pinus sylvestris PE 2 SV 1
blastp_uniprot_sprot sp|P24006|CB2A_PYRPY 70 273 + 204 Gaps:9 73.74 278 55.12 6e-65 Chlorophyll a-b binding protein 1A chloroplastic OS Pyrus pyrifolia PE 2 SV 1
blastp_uniprot_sprot sp|P07369|CB2G_SOLLC 57 273 + 217 Gaps:12 80.52 267 54.42 7e-65 Chlorophyll a-b binding protein 3C chloroplastic OS Solanum lycopersicum GN CAB3C PE 3 SV 1

10 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 1 3 3 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
Gene3D 86 276 191 G3DSA:1.10.3460.10 none none IPR023329
Phobius 21 288 268 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
PANTHER 32 288 257 PTHR21649 none none IPR001344
Phobius 1 20 20 SIGNAL_PEPTIDE none Signal peptide region none
Phobius 16 20 5 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
Phobius 4 15 12 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
PANTHER 32 288 257 PTHR21649:SF3 none none none
SUPERFAMILY 69 279 211 SSF103511 none none IPR023329
Pfam 90 251 162 PF00504 none Chlorophyll A-B binding protein IPR022796

0 Localization

0 Qtllist

0 Targeting