Protein : Qrob_P0485910.2 Q. robur
Protein Identifier  ? Qrob_P0485910.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=6) KOG0794//KOG0834//KOG0835 - CDK8 kinase-activating protein cyclin C [Transcription]. // CDK9 kinase-activating protein cyclin T [Cell cycle control cell division chromosome partitioning]. // Cyclin L [General function prediction only]. Gene Prediction Quality  validated
Protein length 

Sequence

Length: 300  
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0005515 protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
GO:0006355 regulation of transcription, DNA-templated Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity Any process that modulates the frequency, rate or extent of cyclin-dependent protein serine/threonine kinase activity.
GO:0019901 protein kinase binding Interacting selectively and non-covalently with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate.

34 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pop:POPTR_0013s01360g 155 299 + 145 Gaps:112 22.69 1124 45.88 2e-49 POPTRDRAFT_773603 WD-40 repeat family protein
blastp_kegg lcl|gmx:100800771 154 298 + 145 Gaps:111 22.48 1130 45.67 5e-49 topless-related protein 3-like
blastp_kegg lcl|pvu:PHAVU_007G198900g 154 299 + 146 Gaps:112 22.61 1132 46.09 2e-48 hypothetical protein
blastp_kegg lcl|gmx:100808421 154 298 + 145 Gaps:111 22.48 1130 46.06 2e-48 topless-related protein 3-like
blastp_kegg lcl|mtr:MTR_7g112460 154 299 + 146 Gaps:111 22.59 1129 45.49 5e-48 hypothetical protein
blastp_kegg lcl|gmx:100793575 154 299 + 146 Gaps:111 22.57 1130 45.10 1e-47 topless-related protein 3-like
blastp_kegg lcl|gmx:100793517 154 299 + 146 Gaps:111 22.59 1129 45.10 1e-47 topless-related protein 3-like
blastp_kegg lcl|pop:POPTR_0005s02160g 155 299 + 145 Gaps:112 22.51 1133 44.71 2e-47 WD-40 repeat family protein
blastp_kegg lcl|rcu:RCOM_1434170 154 299 + 146 Gaps:112 22.61 1132 45.31 6e-47 WD-repeat protein putative
blastp_kegg lcl|sly:101262960 154 299 + 146 Gaps:111 22.55 1131 43.92 1e-46 topless-related protein 3-like
blastp_pdb 2w2h_B 25 102 + 78 none 29.55 264 38.46 6e-07 mol:protein length:264 CYCLIN-T1
blastp_pdb 2w2h_A 25 102 + 78 none 29.55 264 38.46 6e-07 mol:protein length:264 CYCLIN-T1
blastp_pdb 2pk2_D 25 102 + 78 none 21.79 358 38.46 2e-06 mol:protein length:358 Cyclin-T1 Protein Tat
blastp_pdb 2pk2_C 25 102 + 78 none 21.79 358 38.46 2e-06 mol:protein length:358 Cyclin-T1 Protein Tat
blastp_pdb 2pk2_B 25 102 + 78 none 21.79 358 38.46 2e-06 mol:protein length:358 Cyclin-T1 Protein Tat
blastp_pdb 2pk2_A 25 102 + 78 none 21.79 358 38.46 2e-06 mol:protein length:358 Cyclin-T1 Protein Tat
blastp_pdb 2i53_A 24 72 + 49 none 18.99 258 42.86 3e-06 mol:protein length:258 Cyclin K
blastp_pdb 3tni_B 25 102 + 78 none 30.12 259 37.18 5e-06 mol:protein length:259 Cyclin-T1
blastp_pdb 3tnh_B 25 102 + 78 none 30.12 259 37.18 5e-06 mol:protein length:259 Cyclin-T1
blastp_pdb 3mia_B 25 102 + 78 none 29.32 266 37.18 5e-06 mol:protein length:266 Cyclin-T1
blastp_uniprot_sprot sp|Q84JM4|TPR3_ARATH 161 298 + 138 Gaps:89 19.22 1108 43.19 4e-37 Topless-related protein 3 OS Arabidopsis thaliana GN TPR3 PE 1 SV 1
blastp_uniprot_sprot sp|Q9LRZ0|TPR2_ARATH 161 298 + 138 Gaps:85 19.19 1131 41.94 9e-35 Topless-related protein 2 OS Arabidopsis thaliana GN TPR2 PE 1 SV 2
blastp_uniprot_sprot sp|Q9AS36|CCL11_ORYSJ 23 102 + 80 Gaps:4 19.67 427 64.29 5e-30 Cyclin-L1-1 OS Oryza sativa subsp. japonica GN CYCL1-1 PE 2 SV 1
blastp_uniprot_sprot sp|Q8RWV3|CCL11_ARATH 23 92 + 70 Gaps:1 17.07 416 76.06 1e-29 Cyclin-L1-1 OS Arabidopsis thaliana GN CYCL1-1 PE 2 SV 2
blastp_uniprot_sprot sp|Q0WV90|TPR1_ARATH 114 297 + 184 Gaps:96 22.32 1120 35.60 3e-26 Topless-related protein 1 OS Arabidopsis thaliana GN TPR1 PE 1 SV 3
blastp_uniprot_sprot sp|Q94AI7|TPL_ARATH 171 297 + 127 Gaps:84 18.48 1131 36.84 7e-26 Protein TOPLESS OS Arabidopsis thaliana GN TPL PE 1 SV 1
blastp_uniprot_sprot sp|Q27GK7|TPR4_ARATH 167 297 + 131 Gaps:85 18.68 1135 35.85 2e-23 Topless-related protein 4 OS Arabidopsis thaliana GN TPR4 PE 1 SV 2
blastp_uniprot_sprot sp|Q5RD50|CCNL1_PONAB 25 78 + 54 none 31.40 172 55.56 3e-12 Cyclin-L1 OS Pongo abelii GN CCNL1 PE 3 SV 1
blastp_uniprot_sprot sp|Q5BKF8|CCNL2_XENTR 25 78 + 54 none 10.87 497 55.56 4e-11 Cyclin-L2 OS Xenopus tropicalis GN ccnl2 PE 2 SV 1
blastp_uniprot_sprot sp|Q9UK58|CCNL1_HUMAN 25 78 + 54 none 10.27 526 55.56 5e-11 Cyclin-L1 OS Homo sapiens GN CCNL1 PE 1 SV 1

8 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 24 102 79 PTHR10026 none none IPR015429
Gene3D 247 297 51 G3DSA:2.130.10.10 none none IPR015943
SMART 5 93 89 SM00385 none domain present in cyclins, TFIIB and Retinoblastoma IPR013763
PANTHER 24 102 79 PTHR10026:SF13 none none none
SUPERFAMILY 18 78 61 SSF47954 none none IPR013763
SUPERFAMILY 230 299 70 SSF50998 none none IPR011047
Pfam 22 74 53 PF00134 none Cyclin, N-terminal domain IPR006671
Gene3D 4 91 88 G3DSA:1.10.472.10 none none IPR013763

1 Localization

Analysis Start End Length
SignalP_EUK 1 15 14

1 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_rEpiBC_3P Qrob_Chr05 5 s_2GDU0O_517 s_1BT8O3_239 25,81 0 55,45 lod 2,2101 5,5

0 Targeting