Protein : Qrob_P0485870.2 Q. robur
Protein Identifier  ? Qrob_P0485870.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=6) KOG0834//KOG0835 - CDK9 kinase-activating protein cyclin T [Cell cycle control cell division chromosome partitioning]. // Cyclin L [General function prediction only]. Gene Prediction Quality  validated
Protein length 

Sequence

Length: 256  
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0006355 regulation of transcription, DNA-templated Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity Any process that modulates the frequency, rate or extent of cyclin-dependent protein serine/threonine kinase activity.
GO:0019901 protein kinase binding Interacting selectively and non-covalently with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate.

28 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cmo:103492172 1 179 + 179 Gaps:81 43.34 443 60.94 6e-60 cyclin-L1-1
blastp_kegg lcl|tcc:TCM_043086 1 179 + 179 Gaps:81 42.01 457 60.94 7e-60 Arginine-rich cyclin 1
blastp_kegg lcl|pxb:103934016 1 179 + 179 Gaps:81 43.05 446 60.42 3e-59 cyclin-L1-1-like
blastp_kegg lcl|pxb:103928350 1 179 + 179 Gaps:81 43.05 446 60.42 3e-59 cyclin-L1-1-like
blastp_kegg lcl|mtr:MTR_5g010140 1 179 + 179 Gaps:81 42.86 448 60.42 3e-59 Cyclin-L1-1
blastp_kegg lcl|csv:101207220 1 179 + 179 Gaps:81 43.34 443 60.42 4e-59 cyclin-L1-1-like
blastp_kegg lcl|gmx:100820383 1 179 + 179 Gaps:81 43.15 445 60.42 5e-59 cyclin-L1-1-like
blastp_kegg lcl|vvi:100241975 1 179 + 179 Gaps:81 42.57 451 60.42 6e-59 cyclin-L1-1-like
blastp_kegg lcl|mdm:103434000 1 179 + 179 Gaps:81 43.05 446 59.90 1e-58 cyclin-L1-1
blastp_kegg lcl|pvu:PHAVU_007G183500g 1 179 + 179 Gaps:81 42.95 447 59.38 1e-58 hypothetical protein
blastp_pdb 3tn8_B 9 168 + 160 Gaps:17 65.00 260 24.85 7e-06 mol:protein length:260 Cyclin-T1
blastp_pdb 3my1_B 9 168 + 160 Gaps:17 65.00 260 24.85 7e-06 mol:protein length:260 Cyclin-T1
blastp_pdb 3lq5_B 9 168 + 160 Gaps:17 65.00 260 24.85 7e-06 mol:protein length:260 Cyclin-T1
blastp_pdb 3blr_B 9 168 + 160 Gaps:17 65.00 260 24.85 7e-06 mol:protein length:260 Cyclin-T1
blastp_pdb 3blq_B 9 168 + 160 Gaps:17 65.00 260 24.85 7e-06 mol:protein length:260 Cyclin-T1
blastp_pdb 3blh_B 9 168 + 160 Gaps:17 65.00 260 24.85 7e-06 mol:protein length:260 Cyclin-T1
blastp_uniprot_sprot sp|Q8RWV3|CCL11_ARATH 1 179 + 179 Gaps:81 46.15 416 57.81 2e-57 Cyclin-L1-1 OS Arabidopsis thaliana GN CYCL1-1 PE 2 SV 2
blastp_uniprot_sprot sp|Q9AS36|CCL11_ORYSJ 1 179 + 179 Gaps:20 44.73 427 56.02 2e-54 Cyclin-L1-1 OS Oryza sativa subsp. japonica GN CYCL1-1 PE 2 SV 1
blastp_uniprot_sprot sp|Q7ZVX0|CCNL1_DANRE 2 182 + 181 Gaps:15 38.96 498 35.05 1e-23 Cyclin-L1 OS Danio rerio GN ccnl1 PE 1 SV 1
blastp_uniprot_sprot sp|Q5I0H5|CCNL2_RAT 2 179 + 178 Gaps:16 36.92 520 36.46 6e-23 Cyclin-L2 OS Rattus norvegicus GN Ccnl2 PE 2 SV 2
blastp_uniprot_sprot sp|Q9JJA7|CCNL2_MOUSE 2 179 + 178 Gaps:16 37.07 518 36.46 6e-23 Cyclin-L2 OS Mus musculus GN Ccnl2 PE 2 SV 1
blastp_uniprot_sprot sp|Q96S94|CCNL2_HUMAN 2 179 + 178 Gaps:16 36.92 520 35.94 1e-22 Cyclin-L2 OS Homo sapiens GN CCNL2 PE 1 SV 1
blastp_uniprot_sprot sp|Q84JM4|TPR3_ARATH 185 253 + 69 Gaps:17 7.76 1108 61.63 4e-22 Topless-related protein 3 OS Arabidopsis thaliana GN TPR3 PE 1 SV 1
blastp_uniprot_sprot sp|Q5ZJP9|CCNL1_CHICK 2 179 + 178 Gaps:16 35.96 534 35.42 6e-22 Cyclin-L1 OS Gallus gallus GN CCNL1 PE 2 SV 1
blastp_uniprot_sprot sp|Q6GN15|CCNL1_XENLA 2 182 + 181 Gaps:16 39.31 496 35.38 1e-21 Cyclin-L1 OS Xenopus laevis GN ccnl1 PE 2 SV 2
blastp_uniprot_sprot sp|Q9UK58|CCNL1_HUMAN 2 182 + 181 Gaps:16 37.07 526 34.87 2e-21 Cyclin-L1 OS Homo sapiens GN CCNL1 PE 1 SV 1
rpsblast_kog gnl|CDD|36053 13 182 + 170 Gaps:82 50.14 367 37.50 1e-28 KOG0835 KOG0835 KOG0835 Cyclin L [General function prediction only].
rpsblast_kog gnl|CDD|36052 13 168 + 156 Gaps:16 51.39 323 28.92 9e-14 KOG0834 KOG0834 KOG0834 CDK9 kinase-activating protein cyclin T [Cell cycle control cell division chromosome partitioning].

13 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 58 82 25 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Gene3D 5 51 47 G3DSA:1.10.472.10 none none IPR013763
Gene3D 68 112 45 G3DSA:1.10.472.10 none none IPR013763
Gene3D 113 168 56 G3DSA:1.10.472.10 none none IPR013763
Phobius 1 57 57 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 83 255 173 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
PANTHER 81 182 102 PTHR10026:SF13 none none none
SUPERFAMILY 139 171 33 SSF47954 none none IPR013763
PANTHER 81 182 102 PTHR10026 none none IPR015429
PANTHER 2 49 48 PTHR10026 none none IPR015429
PANTHER 2 49 48 PTHR10026:SF13 none none none
SUPERFAMILY 9 50 42 SSF47954 none none IPR013763
SUPERFAMILY 83 134 52 SSF47954 none none IPR013763

1 Localization

Analysis Start End Length
TMHMM 58 80 22

1 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_rEpiBC_3P Qrob_Chr05 5 s_2GDU0O_517 s_1BT8O3_239 25,81 0 55,45 lod 2,2101 5,5

0 Targeting