Protein : Qrob_P0484550.2 Q. robur
Protein Identifier  ? Qrob_P0484550.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=56) PTHR22595 - CHITINASE-RELATED Gene Prediction Quality  validated
Protein length 

Sequence

Length: 169  
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0004568 chitinase activity Catalysis of the hydrolysis of (1->4)-beta linkages of N-acetyl-D-glucosamine (GlcNAc) polymers of chitin and chitodextrins.
GO:0006032 chitin catabolic process The chemical reactions and pathways resulting in the breakdown of chitin, a linear polysaccharide consisting of beta-(1->4)-linked N-acetyl-D-glucosamine residues.
GO:0016998 cell wall macromolecule catabolic process The chemical reactions and pathways resulting in the breakdown of macromolecules that form part of a cell wall.

33 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|fve:101315219 21 153 + 133 Gaps:15 36.53 323 57.63 3e-31 chitinase-like protein 2-like
blastp_kegg lcl|vvi:100261982 23 153 + 131 Gaps:29 36.14 321 57.76 4e-31 chitinase-like protein 2
blastp_kegg lcl|tcc:TCM_026942 21 153 + 133 Gaps:15 36.65 322 55.93 3e-30 Chitinase family protein
blastp_kegg lcl|pxb:103959326 21 153 + 133 Gaps:15 36.88 320 55.93 5e-30 chitinase-like protein 2
blastp_kegg lcl|pxb:103940496 21 153 + 133 Gaps:15 36.88 320 55.93 5e-30 chitinase-like protein 2
blastp_kegg lcl|pmum:103323122 21 153 + 133 Gaps:15 36.31 325 55.93 6e-30 chitinase-like protein 2
blastp_kegg lcl|pper:PRUPE_ppa008643mg 21 153 + 133 Gaps:15 36.42 324 55.93 6e-30 hypothetical protein
blastp_kegg lcl|mdm:103425619 23 153 + 131 Gaps:15 35.47 327 56.03 7e-30 chitinase-like protein 2
blastp_kegg lcl|mdm:103403561 23 153 + 131 Gaps:15 35.37 328 56.03 8e-30 chitinase-like protein 2
blastp_kegg lcl|tcc:TCM_021326 21 153 + 133 Gaps:15 37.46 315 55.08 1e-29 Chitinase-like protein 2
blastp_pdb 3cql_B 21 153 + 133 Gaps:18 47.33 243 40.87 3e-16 mol:protein length:243 Endochitinase
blastp_pdb 3cql_A 21 153 + 133 Gaps:18 47.33 243 40.87 3e-16 mol:protein length:243 Endochitinase
blastp_pdb 3iwr_B 21 153 + 133 Gaps:18 37.22 309 39.13 3e-16 mol:protein length:309 Chitinase
blastp_pdb 3iwr_A 21 153 + 133 Gaps:18 37.22 309 39.13 3e-16 mol:protein length:309 Chitinase
blastp_pdb 2dkv_A 21 153 + 133 Gaps:18 37.22 309 39.13 3e-16 mol:protein length:309 chitinase
blastp_pdb 1dxj_A 21 152 + 132 Gaps:20 46.28 242 39.29 7e-16 mol:protein length:242 CLASS II CHITINASE
blastp_pdb 2baa_A 21 152 + 132 Gaps:18 46.91 243 36.84 7e-14 mol:protein length:243 ENDOCHITINASE (26 KD)
blastp_pdb 1cns_B 21 152 + 132 Gaps:18 46.91 243 36.84 9e-14 mol:protein length:243 CHITINASE
blastp_pdb 1cns_A 21 152 + 132 Gaps:18 46.91 243 36.84 9e-14 mol:protein length:243 CHITINASE
blastp_pdb 2z38_A 21 152 + 132 Gaps:17 46.56 247 36.52 2e-13 mol:protein length:247 Chitinase
blastp_uniprot_sprot sp|Q9LSP9|CTL2_ARATH 21 153 + 133 Gaps:15 35.44 333 54.24 1e-29 Chitinase-like protein 2 OS Arabidopsis thaliana GN CTL2 PE 2 SV 1
blastp_uniprot_sprot sp|Q9MA41|CTL1_ARATH 21 153 + 133 Gaps:29 36.76 321 53.39 2e-28 Chitinase-like protein 1 OS Arabidopsis thaliana GN CTL1 PE 1 SV 1
blastp_uniprot_sprot sp|P24626|CHI3_ORYSJ 21 152 + 132 Gaps:17 35.94 320 40.87 6e-16 Chitinase 3 OS Oryza sativa subsp. japonica GN Cht3 PE 2 SV 2
blastp_uniprot_sprot sp|P36907|CHIX_PEA 21 153 + 133 Gaps:19 35.62 320 41.23 8e-16 Endochitinase OS Pisum sativum PE 2 SV 1
blastp_uniprot_sprot sp|P85084|CHIT_CARPA 21 158 + 138 Gaps:18 49.38 243 39.17 8e-16 Endochitinase OS Carica papaya PE 1 SV 1
blastp_uniprot_sprot sp|Q7DNA1|CHI2_ORYSJ 21 153 + 133 Gaps:18 33.82 340 39.13 2e-15 Chitinase 2 OS Oryza sativa subsp. japonica GN Cht2 PE 1 SV 1
blastp_uniprot_sprot sp|Q05537|CHID_SOLLC 21 153 + 133 Gaps:18 46.75 246 39.13 3e-15 Basic endochitinase (Fragment) OS Solanum lycopersicum GN CHI14 PE 2 SV 1
blastp_uniprot_sprot sp|Q39785|CHI2_GOSHI 18 152 + 135 Gaps:18 38.74 302 40.17 5e-15 Endochitinase 2 (Fragment) OS Gossypium hirsutum PE 2 SV 2
blastp_uniprot_sprot sp|Q39799|CHI1_GOSHI 18 152 + 135 Gaps:18 36.11 324 40.17 5e-15 Endochitinase 1 OS Gossypium hirsutum PE 3 SV 1
blastp_uniprot_sprot sp|P52405|CHI3_SOLTU 21 152 + 132 Gaps:18 35.85 318 36.84 2e-14 Endochitinase 3 (Fragment) OS Solanum tuberosum GN CHTB3 PE 2 SV 1

5 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 21 153 133 PF00182 "KEGG:00520+3.2.1.14","MetaCyc:PWY-6902" Chitinase class I IPR000726
SUPERFAMILY 91 153 63 SSF53955 none none IPR023346
PANTHER 21 72 52 PTHR22595 none none none
PANTHER 90 154 65 PTHR22595 none none none
Gene3D 90 153 64 G3DSA:1.10.530.10 none none none

0 Localization

6 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran_2000_2002_QTL6_Delta.F Qrob_Chr03 3 s_2HYXJ2_207 s_1AUAXK_317 29.12 6,3 45,37 lod 3.1666 0.026
Bourran2_2014_nLBD_3P Qrob_Chr03 3 s_1ET7H8_604 s_1BYNB5_834 23,73 0 46,72 lod 1,7573 3,8
PM_1999_QTL14_peak_Bud_burst_3P Qrob_Chr03 3 s_2F0SI1_756 v_6056_735 11,78 3,78 50,78 lod 2,5 4,5
Bourran2_2014_nFork*_3P Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,28 7,43 41,48 lod 2,4044 5,5
Bourran2_2014_rEpiBC*_3P Qrob_Chr03 3 s_1A3B3X_1163 s_1DKGMO_450 23,04 4,92 41,12 lod 2,5668 7

0 Targeting