Protein : Qrob_P0484530.2 Q. robur
Protein Identifier  ? Qrob_P0484530.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=56) PTHR22595 - CHITINASE-RELATED Gene Prediction Quality  validated
Protein length 

Sequence

Length: 265  
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0004568 chitinase activity Catalysis of the hydrolysis of (1->4)-beta linkages of N-acetyl-D-glucosamine (GlcNAc) polymers of chitin and chitodextrins.
GO:0006032 chitin catabolic process The chemical reactions and pathways resulting in the breakdown of chitin, a linear polysaccharide consisting of beta-(1->4)-linked N-acetyl-D-glucosamine residues.
GO:0016998 cell wall macromolecule catabolic process The chemical reactions and pathways resulting in the breakdown of macromolecules that form part of a cell wall.

33 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cit:102626061 34 264 + 231 Gaps:22 76.62 325 59.44 2e-102 chitinase-like protein 2-like
blastp_kegg lcl|cic:CICLE_v10005421mg 34 264 + 231 Gaps:22 76.62 325 59.44 5e-102 hypothetical protein
blastp_kegg lcl|vvi:100261982 34 264 + 231 Gaps:22 77.57 321 58.63 2e-101 chitinase-like protein 2
blastp_kegg lcl|tcc:TCM_021326 34 264 + 231 Gaps:22 79.05 315 59.04 2e-101 Chitinase-like protein 2
blastp_kegg lcl|cam:101494837 1 264 + 264 Gaps:36 89.94 318 56.99 6e-101 chitinase-like protein 2-like
blastp_kegg lcl|gmx:100809617 33 264 + 232 Gaps:24 78.86 317 59.60 4e-100 chitinase-like protein 2-like
blastp_kegg lcl|rcu:RCOM_0999860 34 264 + 231 Gaps:22 76.85 324 57.83 1e-99 chitinase putative (EC:3.2.1.14)
blastp_kegg lcl|pop:POPTR_0010s15150g 34 264 + 231 Gaps:22 77.81 320 58.23 2e-99 POPTRDRAFT_723883 class1 chitinase family protein
blastp_kegg lcl|pxb:103940496 34 264 + 231 Gaps:22 77.81 320 59.04 2e-99 chitinase-like protein 2
blastp_kegg lcl|pxb:103959326 34 264 + 231 Gaps:22 77.81 320 59.04 2e-99 chitinase-like protein 2
blastp_pdb 3cql_B 76 260 + 185 Gaps:6 73.66 243 36.31 1e-37 mol:protein length:243 Endochitinase
blastp_pdb 3cql_A 76 260 + 185 Gaps:6 73.66 243 36.31 1e-37 mol:protein length:243 Endochitinase
blastp_pdb 3iwr_B 76 260 + 185 Gaps:6 57.93 309 35.75 2e-35 mol:protein length:309 Chitinase
blastp_pdb 3iwr_A 76 260 + 185 Gaps:6 57.93 309 35.75 2e-35 mol:protein length:309 Chitinase
blastp_pdb 2dkv_A 76 260 + 185 Gaps:6 57.93 309 35.75 2e-35 mol:protein length:309 chitinase
blastp_pdb 1cns_B 62 253 + 192 Gaps:5 76.95 243 35.29 5e-35 mol:protein length:243 CHITINASE
blastp_pdb 1cns_A 62 253 + 192 Gaps:5 76.95 243 35.29 5e-35 mol:protein length:243 CHITINASE
blastp_pdb 2baa_A 62 253 + 192 Gaps:5 76.95 243 35.83 7e-35 mol:protein length:243 ENDOCHITINASE (26 KD)
blastp_pdb 1dxj_A 62 250 + 189 Gaps:7 75.21 242 35.71 2e-34 mol:protein length:242 CLASS II CHITINASE
blastp_pdb 2z37_D 76 253 + 178 Gaps:2 72.13 244 30.68 1e-29 mol:protein length:244 Chitinase
blastp_uniprot_sprot sp|Q9MA41|CTL1_ARATH 34 264 + 231 Gaps:22 77.57 321 56.63 3e-97 Chitinase-like protein 1 OS Arabidopsis thaliana GN CTL1 PE 1 SV 1
blastp_uniprot_sprot sp|Q9LSP9|CTL2_ARATH 34 264 + 231 Gaps:23 75.08 333 55.60 3e-94 Chitinase-like protein 2 OS Arabidopsis thaliana GN CTL2 PE 2 SV 1
blastp_uniprot_sprot sp|Q09023|CHI2_BRANA 62 253 + 192 Gaps:5 58.07 322 37.43 4e-40 Endochitinase CH25 OS Brassica napus PE 2 SV 1
blastp_uniprot_sprot sp|P19171|CHIB_ARATH 62 253 + 192 Gaps:5 55.82 335 38.50 2e-38 Basic endochitinase B OS Arabidopsis thaliana GN CHI-B PE 1 SV 3
blastp_uniprot_sprot sp|P85084|CHIT_CARPA 76 260 + 185 Gaps:6 73.66 243 37.99 1e-37 Endochitinase OS Carica papaya PE 1 SV 1
blastp_uniprot_sprot sp|Q5NB11|CHI10_ORYSJ 76 253 + 178 Gaps:2 60.69 290 37.50 2e-37 Chitinase 10 OS Oryza sativa subsp. japonica GN Cht10 PE 2 SV 1
blastp_uniprot_sprot sp|P21226|CHI2_PEA 67 253 + 187 Gaps:6 57.10 324 34.59 1e-36 Endochitinase A2 OS Pisum sativum GN CHI2 PE 1 SV 2
blastp_uniprot_sprot sp|Q05538|CHIC_SOLLC 62 256 + 195 Gaps:9 59.01 322 36.84 2e-36 Basic 30 kDa endochitinase OS Solanum lycopersicum GN CHI9 PE 1 SV 1
blastp_uniprot_sprot sp|Q05537|CHID_SOLLC 63 253 + 191 Gaps:5 75.61 246 36.56 3e-36 Basic endochitinase (Fragment) OS Solanum lycopersicum GN CHI14 PE 2 SV 1
blastp_uniprot_sprot sp|Q39799|CHI1_GOSHI 63 253 + 191 Gaps:6 57.72 324 36.90 4e-36 Endochitinase 1 OS Gossypium hirsutum PE 3 SV 1

6 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 62 256 195 PF00182 "KEGG:00520+3.2.1.14","MetaCyc:PWY-6902" Chitinase class I IPR000726
Gene3D 110 166 57 G3DSA:3.30.20.10 none none none
Gene3D 167 255 89 G3DSA:1.10.530.10 none none none
Gene3D 64 91 28 G3DSA:1.10.530.10 none none none
PANTHER 78 253 176 PTHR22595 none none none
SUPERFAMILY 40 256 217 SSF53955 none none IPR023346

0 Localization

6 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran_2000_2002_QTL6_Delta.F Qrob_Chr03 3 s_2HYXJ2_207 s_1AUAXK_317 29.12 6,3 45,37 lod 3.1666 0.026
Bourran2_2014_nLBD_3P Qrob_Chr03 3 s_1ET7H8_604 s_1BYNB5_834 23,73 0 46,72 lod 1,7573 3,8
PM_1999_QTL14_peak_Bud_burst_3P Qrob_Chr03 3 s_2F0SI1_756 v_6056_735 11,78 3,78 50,78 lod 2,5 4,5
Bourran2_2014_nFork*_3P Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,28 7,43 41,48 lod 2,4044 5,5
Bourran2_2014_rEpiBC*_3P Qrob_Chr03 3 s_1A3B3X_1163 s_1DKGMO_450 23,04 4,92 41,12 lod 2,5668 7

0 Targeting