Protein : Qrob_P0484520.2 Q. robur
Protein Identifier  ? Qrob_P0484520.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=56) PTHR22595 - CHITINASE-RELATED Gene Prediction Quality  validated
Protein length 

Sequence

Length: 183  
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0004568 chitinase activity Catalysis of the hydrolysis of (1->4)-beta linkages of N-acetyl-D-glucosamine (GlcNAc) polymers of chitin and chitodextrins.
GO:0006032 chitin catabolic process The chemical reactions and pathways resulting in the breakdown of chitin, a linear polysaccharide consisting of beta-(1->4)-linked N-acetyl-D-glucosamine residues.
GO:0016998 cell wall macromolecule catabolic process The chemical reactions and pathways resulting in the breakdown of macromolecules that form part of a cell wall.

33 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|vvi:100261982 4 176 + 173 none 53.89 321 76.88 2e-97 chitinase-like protein 2
blastp_kegg lcl|cit:102626061 4 175 + 172 none 52.92 325 75.58 1e-93 chitinase-like protein 2-like
blastp_kegg lcl|vvi:100266937 4 181 + 178 none 56.33 316 70.79 2e-93 chitinase-like protein 2
blastp_kegg lcl|cic:CICLE_v10005421mg 4 175 + 172 none 52.92 325 75.58 4e-93 hypothetical protein
blastp_kegg lcl|tcc:TCM_026942 4 179 + 176 none 54.66 322 71.59 9e-93 Chitinase family protein
blastp_kegg lcl|rcu:RCOM_0999860 4 181 + 178 Gaps:3 55.86 324 71.82 9e-93 chitinase putative (EC:3.2.1.14)
blastp_kegg lcl|fve:101311465 4 181 + 178 none 55.11 323 71.91 2e-92 chitinase-like protein 1-like
blastp_kegg lcl|tcc:TCM_021326 4 174 + 171 none 54.29 315 74.27 2e-92 Chitinase-like protein 2
blastp_kegg lcl|pop:POPTR_0010s15150g 4 175 + 172 none 53.75 320 74.42 3e-92 POPTRDRAFT_723883 class1 chitinase family protein
blastp_kegg lcl|pper:PRUPE_ppa008743mg 4 177 + 174 none 54.21 321 71.84 4e-92 hypothetical protein
blastp_pdb 3cql_B 5 156 + 152 Gaps:3 61.32 243 41.61 3e-38 mol:protein length:243 Endochitinase
blastp_pdb 3cql_A 5 156 + 152 Gaps:3 61.32 243 41.61 3e-38 mol:protein length:243 Endochitinase
blastp_pdb 2baa_A 4 156 + 153 Gaps:3 61.73 243 41.33 4e-37 mol:protein length:243 ENDOCHITINASE (26 KD)
blastp_pdb 1cns_B 4 156 + 153 Gaps:3 61.73 243 40.67 5e-37 mol:protein length:243 CHITINASE
blastp_pdb 1cns_A 4 156 + 153 Gaps:3 61.73 243 40.67 5e-37 mol:protein length:243 CHITINASE
blastp_pdb 3iwr_B 4 175 + 172 Gaps:8 53.07 309 39.02 2e-36 mol:protein length:309 Chitinase
blastp_pdb 3iwr_A 4 175 + 172 Gaps:8 53.07 309 39.02 2e-36 mol:protein length:309 Chitinase
blastp_pdb 2dkv_A 4 175 + 172 Gaps:8 53.07 309 39.02 2e-36 mol:protein length:309 chitinase
blastp_pdb 1dxj_A 5 174 + 170 Gaps:10 66.12 242 38.75 6e-33 mol:protein length:242 CLASS II CHITINASE
blastp_pdb 2z37_D 5 175 + 171 Gaps:7 67.21 244 37.20 8e-33 mol:protein length:244 Chitinase
blastp_uniprot_sprot sp|Q9MA41|CTL1_ARATH 4 177 + 174 none 54.21 321 68.39 2e-87 Chitinase-like protein 1 OS Arabidopsis thaliana GN CTL1 PE 1 SV 1
blastp_uniprot_sprot sp|Q9LSP9|CTL2_ARATH 4 174 + 171 Gaps:1 51.65 333 69.77 8e-86 Chitinase-like protein 2 OS Arabidopsis thaliana GN CTL2 PE 2 SV 1
blastp_uniprot_sprot sp|Q39799|CHI1_GOSHI 5 155 + 151 Gaps:3 45.68 324 43.92 2e-39 Endochitinase 1 OS Gossypium hirsutum PE 3 SV 1
blastp_uniprot_sprot sp|Q39785|CHI2_GOSHI 5 155 + 151 Gaps:3 49.01 302 43.24 3e-39 Endochitinase 2 (Fragment) OS Gossypium hirsutum PE 2 SV 2
blastp_uniprot_sprot sp|Q41596|CHI1_THECC 6 180 + 175 Gaps:11 52.34 321 43.45 7e-39 Endochitinase 1 OS Theobroma cacao GN CHIA1 PE 2 SV 1
blastp_uniprot_sprot sp|Q05537|CHID_SOLLC 5 174 + 170 Gaps:8 65.85 246 42.59 3e-38 Basic endochitinase (Fragment) OS Solanum lycopersicum GN CHI14 PE 2 SV 1
blastp_uniprot_sprot sp|P85084|CHIT_CARPA 5 156 + 152 Gaps:3 61.32 243 42.95 4e-38 Endochitinase OS Carica papaya PE 1 SV 1
blastp_uniprot_sprot sp|Q05538|CHIC_SOLLC 5 174 + 170 Gaps:8 50.31 322 41.98 2e-37 Basic 30 kDa endochitinase OS Solanum lycopersicum GN CHI9 PE 1 SV 1
blastp_uniprot_sprot sp|P52405|CHI3_SOLTU 5 174 + 170 Gaps:8 50.94 318 41.36 3e-37 Endochitinase 3 (Fragment) OS Solanum tuberosum GN CHTB3 PE 2 SV 1
blastp_uniprot_sprot sp|P52404|CHI2_SOLTU 5 174 + 170 Gaps:8 51.27 316 41.36 3e-37 Endochitinase 2 (Fragment) OS Solanum tuberosum GN CHTB2 PE 2 SV 1

5 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Gene3D 70 158 89 G3DSA:1.10.530.10 none none none
Pfam 2 157 156 PF00182 "KEGG:00520+3.2.1.14","MetaCyc:PWY-6902" Chitinase class I IPR000726
SUPERFAMILY 3 175 173 SSF53955 none none IPR023346
PANTHER 1 178 178 PTHR22595 none none none
Gene3D 13 69 57 G3DSA:3.30.20.10 none none none

0 Localization

6 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran_2000_2002_QTL6_Delta.F Qrob_Chr03 3 s_2HYXJ2_207 s_1AUAXK_317 29.12 6,3 45,37 lod 3.1666 0.026
Bourran2_2014_nLBD_3P Qrob_Chr03 3 s_1ET7H8_604 s_1BYNB5_834 23,73 0 46,72 lod 1,7573 3,8
PM_1999_QTL14_peak_Bud_burst_3P Qrob_Chr03 3 s_2F0SI1_756 v_6056_735 11,78 3,78 50,78 lod 2,5 4,5
Bourran2_2014_nFork*_3P Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,28 7,43 41,48 lod 2,4044 5,5
Bourran2_2014_rEpiBC*_3P Qrob_Chr03 3 s_1A3B3X_1163 s_1DKGMO_450 23,04 4,92 41,12 lod 2,5668 7

0 Targeting