Protein : Qrob_P0484490.2 Q. robur
Protein Identifier  ? Qrob_P0484490.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=56) PTHR22595 - CHITINASE-RELATED Gene Prediction Quality  validated
Protein length 

Sequence

Length: 172  
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0004568 chitinase activity Catalysis of the hydrolysis of (1->4)-beta linkages of N-acetyl-D-glucosamine (GlcNAc) polymers of chitin and chitodextrins.
GO:0006032 chitin catabolic process The chemical reactions and pathways resulting in the breakdown of chitin, a linear polysaccharide consisting of beta-(1->4)-linked N-acetyl-D-glucosamine residues.
GO:0016998 cell wall macromolecule catabolic process The chemical reactions and pathways resulting in the breakdown of macromolecules that form part of a cell wall.

33 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|vvi:100261982 37 165 + 129 none 40.19 321 82.17 7e-73 chitinase-like protein 2
blastp_kegg lcl|rcu:RCOM_1378210 37 170 + 134 none 41.74 321 76.87 3e-71 chitinase putative (EC:3.2.1.14)
blastp_kegg lcl|cit:102626061 37 164 + 128 none 39.38 325 80.47 3e-70 chitinase-like protein 2-like
blastp_kegg lcl|pmum:103323122 37 165 + 129 none 39.69 325 79.84 5e-70 chitinase-like protein 2
blastp_kegg lcl|pper:PRUPE_ppa008643mg 37 165 + 129 none 39.81 324 79.84 6e-70 hypothetical protein
blastp_kegg lcl|cic:CICLE_v10005421mg 37 164 + 128 none 39.38 325 80.47 9e-70 hypothetical protein
blastp_kegg lcl|rcu:RCOM_0999860 37 164 + 128 none 39.51 324 78.12 9e-70 chitinase putative (EC:3.2.1.14)
blastp_kegg lcl|vvi:100266937 37 168 + 132 none 41.77 316 75.76 1e-69 chitinase-like protein 2
blastp_kegg lcl|fve:101311465 37 165 + 129 none 39.94 323 78.29 3e-69 chitinase-like protein 1-like
blastp_kegg lcl|tcc:TCM_021326 37 163 + 127 none 40.32 315 78.74 1e-68 Chitinase-like protein 2
blastp_pdb 3iwr_B 37 169 + 133 Gaps:6 41.10 309 40.16 2e-27 mol:protein length:309 Chitinase
blastp_pdb 3iwr_A 37 169 + 133 Gaps:6 41.10 309 40.16 2e-27 mol:protein length:309 Chitinase
blastp_pdb 2dkv_A 37 169 + 133 Gaps:6 41.10 309 40.16 2e-27 mol:protein length:309 chitinase
blastp_pdb 2baa_A 34 145 + 112 Gaps:1 45.68 243 42.34 2e-27 mol:protein length:243 ENDOCHITINASE (26 KD)
blastp_pdb 1cns_B 34 145 + 112 Gaps:1 45.68 243 41.44 3e-27 mol:protein length:243 CHITINASE
blastp_pdb 1cns_A 34 145 + 112 Gaps:1 45.68 243 41.44 3e-27 mol:protein length:243 CHITINASE
blastp_pdb 1dxj_A 37 163 + 127 Gaps:6 50.00 242 40.50 9e-26 mol:protein length:242 CLASS II CHITINASE
blastp_pdb 3cql_B 37 145 + 109 Gaps:1 44.44 243 39.81 2e-25 mol:protein length:243 Endochitinase
blastp_pdb 3cql_A 37 145 + 109 Gaps:1 44.44 243 39.81 2e-25 mol:protein length:243 Endochitinase
blastp_pdb 2z38_A 37 164 + 128 Gaps:6 49.39 247 38.52 5e-23 mol:protein length:247 Chitinase
blastp_uniprot_sprot sp|Q9MA41|CTL1_ARATH 37 166 + 130 none 40.50 321 71.54 3e-65 Chitinase-like protein 1 OS Arabidopsis thaliana GN CTL1 PE 1 SV 1
blastp_uniprot_sprot sp|Q9LSP9|CTL2_ARATH 37 163 + 127 Gaps:1 38.44 333 72.66 4e-62 Chitinase-like protein 2 OS Arabidopsis thaliana GN CTL2 PE 2 SV 1
blastp_uniprot_sprot sp|P36907|CHIX_PEA 37 163 + 127 Gaps:6 37.81 320 42.98 2e-28 Endochitinase OS Pisum sativum PE 2 SV 1
blastp_uniprot_sprot sp|Q05538|CHIC_SOLLC 37 163 + 127 Gaps:6 37.58 322 42.98 2e-28 Basic 30 kDa endochitinase OS Solanum lycopersicum GN CHI9 PE 1 SV 1
blastp_uniprot_sprot sp|P52404|CHI2_SOLTU 37 163 + 127 Gaps:6 38.29 316 42.15 3e-28 Endochitinase 2 (Fragment) OS Solanum tuberosum GN CHTB2 PE 2 SV 1
blastp_uniprot_sprot sp|P52405|CHI3_SOLTU 37 163 + 127 Gaps:6 38.05 318 42.15 3e-28 Endochitinase 3 (Fragment) OS Solanum tuberosum GN CHTB3 PE 2 SV 1
blastp_uniprot_sprot sp|P52403|CHI1_SOLTU 37 164 + 128 Gaps:6 38.36 318 41.80 6e-28 Endochitinase 1 (Fragment) OS Solanum tuberosum GN CHTB1 PE 2 SV 1
blastp_uniprot_sprot sp|Q41596|CHI1_THECC 37 164 + 128 Gaps:6 38.01 321 42.62 1e-27 Endochitinase 1 OS Theobroma cacao GN CHIA1 PE 2 SV 1
blastp_uniprot_sprot sp|Q05537|CHID_SOLLC 37 163 + 127 Gaps:6 49.19 246 42.98 2e-27 Basic endochitinase (Fragment) OS Solanum lycopersicum GN CHI14 PE 2 SV 1
blastp_uniprot_sprot sp|P21226|CHI2_PEA 37 145 + 109 Gaps:1 33.33 324 41.67 3e-27 Endochitinase A2 OS Pisum sativum GN CHI2 PE 1 SV 2

7 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Gene3D 36 163 128 G3DSA:1.10.530.10 none none none
Phobius 12 30 19 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 31 171 141 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
PANTHER 37 167 131 PTHR22595 none none none
SUPERFAMILY 37 164 128 SSF53955 none none IPR023346
Pfam 35 146 112 PF00182 "KEGG:00520+3.2.1.14","MetaCyc:PWY-6902" Chitinase class I IPR000726
Phobius 1 11 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none

0 Localization

6 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran_2000_2002_QTL6_Delta.F Qrob_Chr03 3 s_2HYXJ2_207 s_1AUAXK_317 29.12 6,3 45,37 lod 3.1666 0.026
Bourran2_2014_nLBD_3P Qrob_Chr03 3 s_1ET7H8_604 s_1BYNB5_834 23,73 0 46,72 lod 1,7573 3,8
PM_1999_QTL14_peak_Bud_burst_3P Qrob_Chr03 3 s_2F0SI1_756 v_6056_735 11,78 3,78 50,78 lod 2,5 4,5
Bourran2_2014_nFork*_3P Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,28 7,43 41,48 lod 2,4044 5,5
Bourran2_2014_rEpiBC*_3P Qrob_Chr03 3 s_1A3B3X_1163 s_1DKGMO_450 23,04 4,92 41,12 lod 2,5668 7

0 Targeting