Protein : Qrob_P0484480.2 Q. robur
Protein Identifier  ? Qrob_P0484480.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=56) PTHR22595 - CHITINASE-RELATED Gene Prediction Quality  validated
Protein length 

Sequence

Length: 224  
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0004568 chitinase activity Catalysis of the hydrolysis of (1->4)-beta linkages of N-acetyl-D-glucosamine (GlcNAc) polymers of chitin and chitodextrins.
GO:0006032 chitin catabolic process The chemical reactions and pathways resulting in the breakdown of chitin, a linear polysaccharide consisting of beta-(1->4)-linked N-acetyl-D-glucosamine residues.
GO:0016998 cell wall macromolecule catabolic process The chemical reactions and pathways resulting in the breakdown of macromolecules that form part of a cell wall.

33 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cmo:103483884 83 216 + 134 Gaps:5 40.06 322 61.24 4e-41 chitinase-like protein 2
blastp_kegg lcl|csv:101225773 83 216 + 134 Gaps:5 40.06 322 60.47 7e-41 chitinase-like protein 2-like
blastp_kegg lcl|cic:CICLE_v10005421mg 1 216 + 216 Gaps:34 56.00 325 51.10 2e-40 hypothetical protein
blastp_kegg lcl|cit:102626061 1 216 + 216 Gaps:34 56.00 325 51.10 2e-40 chitinase-like protein 2-like
blastp_kegg lcl|sly:101252859 83 216 + 134 Gaps:5 39.33 328 57.36 4e-40 chitinase-like protein 1-like
blastp_kegg lcl|cam:101494837 83 216 + 134 Gaps:5 40.57 318 59.69 4e-40 chitinase-like protein 2-like
blastp_kegg lcl|vvi:100261982 83 216 + 134 Gaps:5 40.19 321 58.91 2e-39 chitinase-like protein 2
blastp_kegg lcl|pmum:103322528 83 216 + 134 Gaps:5 40.19 321 58.91 2e-39 chitinase-like protein 1
blastp_kegg lcl|mtr:MTR_2g034680 83 216 + 134 Gaps:5 40.57 318 58.14 2e-39 Endochitinase
blastp_kegg lcl|crb:CARUB_v10009762mg 52 220 + 169 Gaps:13 48.60 321 53.21 2e-39 hypothetical protein
blastp_pdb 3cql_B 87 216 + 130 Gaps:9 49.79 243 35.54 1e-13 mol:protein length:243 Endochitinase
blastp_pdb 3cql_A 87 216 + 130 Gaps:9 49.79 243 35.54 1e-13 mol:protein length:243 Endochitinase
blastp_pdb 2z38_A 86 216 + 131 Gaps:10 49.80 247 32.52 4e-11 mol:protein length:247 Chitinase
blastp_pdb 2z39_B 86 216 + 131 Gaps:10 50.00 246 32.52 8e-11 mol:protein length:246 Chitinase
blastp_pdb 2z39_A 86 216 + 131 Gaps:10 50.00 246 32.52 8e-11 mol:protein length:246 Chitinase
blastp_pdb 2z37_D 92 216 + 125 Gaps:10 47.95 244 33.33 8e-11 mol:protein length:244 Chitinase
blastp_pdb 2z37_C 92 216 + 125 Gaps:10 47.95 244 33.33 8e-11 mol:protein length:244 Chitinase
blastp_pdb 2z37_B 92 216 + 125 Gaps:10 47.95 244 33.33 8e-11 mol:protein length:244 Chitinase
blastp_pdb 2z37_A 92 216 + 125 Gaps:10 47.95 244 33.33 8e-11 mol:protein length:244 Chitinase
blastp_pdb 1dxj_A 88 214 + 127 Gaps:11 47.93 242 34.48 1e-09 mol:protein length:242 CLASS II CHITINASE
blastp_uniprot_sprot sp|Q9MA41|CTL1_ARATH 83 220 + 138 Gaps:5 41.43 321 57.14 3e-40 Chitinase-like protein 1 OS Arabidopsis thaliana GN CTL1 PE 1 SV 1
blastp_uniprot_sprot sp|Q9LSP9|CTL2_ARATH 83 216 + 134 Gaps:5 38.74 333 59.69 8e-40 Chitinase-like protein 2 OS Arabidopsis thaliana GN CTL2 PE 2 SV 1
blastp_uniprot_sprot sp|Q05537|CHID_SOLLC 88 214 + 127 Gaps:9 47.97 246 38.14 3e-13 Basic endochitinase (Fragment) OS Solanum lycopersicum GN CHI14 PE 2 SV 1
blastp_uniprot_sprot sp|P16061|CHI8_POPTR 83 216 + 134 Gaps:13 40.82 316 34.88 5e-13 Endochitinase WIN8 OS Populus trichocarpa GN WIN8 PE 2 SV 1
blastp_uniprot_sprot sp|P85084|CHIT_CARPA 87 216 + 130 Gaps:9 49.79 243 35.54 1e-12 Endochitinase OS Carica papaya PE 1 SV 1
blastp_uniprot_sprot sp|P19171|CHIB_ARATH 92 222 + 131 Gaps:9 36.42 335 35.25 2e-12 Basic endochitinase B OS Arabidopsis thaliana GN CHI-B PE 1 SV 3
blastp_uniprot_sprot sp|Q9FRV1|CHIA_SECCE 86 214 + 129 Gaps:9 37.38 321 35.83 4e-12 Basic endochitinase A OS Secale cereale GN rsca PE 1 SV 1
blastp_uniprot_sprot sp|Q9FRV0|CHIC_SECCE 84 214 + 131 Gaps:9 45.86 266 33.61 7e-12 Basic endochitinase C OS Secale cereale GN rscc PE 1 SV 1
blastp_uniprot_sprot sp|Q41596|CHI1_THECC 77 216 + 140 Gaps:14 39.88 321 37.50 8e-12 Endochitinase 1 OS Theobroma cacao GN CHIA1 PE 2 SV 1
blastp_uniprot_sprot sp|Q39785|CHI2_GOSHI 88 216 + 129 Gaps:10 40.07 302 36.36 8e-12 Endochitinase 2 (Fragment) OS Gossypium hirsutum PE 2 SV 2

11 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Gene3D 88 164 77 G3DSA:1.10.530.10 none none none
Gene3D 212 220 9 G3DSA:1.10.530.10 none none none
Phobius 1 8 8 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
SUPERFAMILY 88 220 133 SSF53955 none none IPR023346
Phobius 1 23 23 SIGNAL_PEPTIDE none Signal peptide region none
Pfam 94 220 127 PF00182 "KEGG:00520+3.2.1.14","MetaCyc:PWY-6902" Chitinase class I IPR000726
Gene3D 183 211 29 G3DSA:3.30.20.10 none none none
Phobius 9 19 11 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
PANTHER 114 216 103 PTHR22595 none none none
Phobius 24 223 200 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 20 23 4 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none

1 Localization

Analysis Start End Length
SignalP_EUK 1 23 22

6 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran_2000_2002_QTL6_Delta.F Qrob_Chr03 3 s_2HYXJ2_207 s_1AUAXK_317 29.12 6,3 45,37 lod 3.1666 0.026
Bourran2_2014_nLBD_3P Qrob_Chr03 3 s_1ET7H8_604 s_1BYNB5_834 23,73 0 46,72 lod 1,7573 3,8
PM_1999_QTL14_peak_Bud_burst_3P Qrob_Chr03 3 s_2F0SI1_756 v_6056_735 11,78 3,78 50,78 lod 2,5 4,5
Bourran2_2014_nFork*_3P Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,28 7,43 41,48 lod 2,4044 5,5
Bourran2_2014_rEpiBC*_3P Qrob_Chr03 3 s_1A3B3X_1163 s_1DKGMO_450 23,04 4,92 41,12 lod 2,5668 7

0 Targeting