Protein : Qrob_P0484180.2 Q. robur
Protein Identifier  ? Qrob_P0484180.2 Organism . Name  Quercus robur
Score  80.0 Score Type  egn
Protein Description  (M=2) 1.2.1.2 - Formate dehydrogenase. Code Enzyme  EC:1.2.1.2
Gene Prediction Quality  validated Protein length 

Sequence

Length: 373  
Kegg Orthology  K00122
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0008152 metabolic process The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
GO:0055114 oxidation-reduction process A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor Catalysis of an oxidation-reduction (redox) reaction in which a CH-OH group acts as a hydrogen or electron donor and reduces NAD+ or NADP.
GO:0051287 NAD binding Interacting selectively and non-covalently with nicotinamide adenine dinucleotide, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NAD+, or the reduced form, NADH.

43 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|tcc:TCM_016872 1 372 + 372 Gaps:8 99.48 382 86.05 0.0 Formate dehydrogenase
blastp_kegg lcl|vvi:100261093 5 372 + 368 none 96.08 383 88.86 0.0 formate dehydrogenase mitochondrial-like
blastp_kegg lcl|pda:103705850 4 371 + 368 none 96.08 383 87.77 0.0 formate dehydrogenase mitochondrial
blastp_kegg lcl|cam:101502705 12 372 + 361 none 93.28 387 90.30 0.0 formate dehydrogenase 1 mitochondrial-like
blastp_kegg lcl|rcu:RCOM_0850640 19 372 + 354 none 91.71 386 90.96 0.0 formate dehydrogenase putative (EC:1.2.1.2)
blastp_kegg lcl|pda:103701979 11 371 + 361 none 94.26 383 89.20 0.0 formate dehydrogenase mitochondrial
blastp_kegg lcl|pxb:103926915 11 372 + 362 none 94.03 385 89.50 0.0 formate dehydrogenase 1 mitochondrial-like
blastp_kegg lcl|gmx:100797606 1 372 + 372 Gaps:6 99.21 381 85.98 0.0 formate dehydrogenase mitochondrial-like
blastp_kegg lcl|mdm:103404344 11 372 + 362 none 94.03 385 89.50 0.0 formate dehydrogenase mitochondrial
blastp_kegg lcl|cmo:103487087 1 372 + 372 Gaps:10 99.48 384 85.86 0.0 formate dehydrogenase mitochondrial
blastp_pdb 3naq_B 17 372 + 356 Gaps:1 100.00 357 83.47 0.0 mol:protein length:357 Formate dehydrogenase
blastp_pdb 3naq_A 17 372 + 356 Gaps:1 100.00 357 83.47 0.0 mol:protein length:357 Formate dehydrogenase
blastp_pdb 3n7u_L 23 372 + 350 none 99.72 351 84.29 0.0 mol:protein length:351 Formate dehydrogenase
blastp_pdb 3n7u_K 23 372 + 350 none 99.72 351 84.29 0.0 mol:protein length:351 Formate dehydrogenase
blastp_pdb 3n7u_J 23 372 + 350 none 99.72 351 84.29 0.0 mol:protein length:351 Formate dehydrogenase
blastp_pdb 3n7u_I 23 372 + 350 none 99.72 351 84.29 0.0 mol:protein length:351 Formate dehydrogenase
blastp_pdb 3n7u_H 23 372 + 350 none 99.72 351 84.29 0.0 mol:protein length:351 Formate dehydrogenase
blastp_pdb 3n7u_G 23 372 + 350 none 99.72 351 84.29 0.0 mol:protein length:351 Formate dehydrogenase
blastp_pdb 3n7u_F 23 372 + 350 none 99.72 351 84.29 0.0 mol:protein length:351 Formate dehydrogenase
blastp_pdb 3n7u_E 23 372 + 350 none 99.72 351 84.29 0.0 mol:protein length:351 Formate dehydrogenase
blastp_uniprot_sprot sp|Q07511|FDH_SOLTU 2 372 + 371 none 97.38 381 85.71 0.0 Formate dehydrogenase mitochondrial OS Solanum tuberosum GN FDH1 PE 1 SV 2
blastp_uniprot_sprot sp|Q9SXP2|FDH1_ORYSJ 10 372 + 363 none 96.54 376 85.95 0.0 Formate dehydrogenase 1 mitochondrial OS Oryza sativa subsp. japonica GN Os06g0486800 PE 1 SV 2
blastp_uniprot_sprot sp|Q9ZRI8|FDH_HORVU 10 372 + 363 none 96.29 377 84.57 0.0 Formate dehydrogenase mitochondrial OS Hordeum vulgare PE 2 SV 1
blastp_uniprot_sprot sp|Q67U69|FDH2_ORYSJ 5 372 + 368 Gaps:5 98.68 378 80.97 0.0 Formate dehydrogenase 2 mitochondrial OS Oryza sativa subsp. japonica GN Os06g0486900 PE 2 SV 1
blastp_uniprot_sprot sp|Q9S7E4|FDH_ARATH 15 372 + 358 Gaps:1 93.49 384 83.29 0.0 Formate dehydrogenase mitochondrial OS Arabidopsis thaliana GN FDH1 PE 1 SV 1
blastp_uniprot_sprot sp|Q03134|FDH_EMENI 25 370 + 346 Gaps:9 97.26 365 53.80 3e-131 Probable formate dehydrogenase OS Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN aciA PE 2 SV 3
blastp_uniprot_sprot sp|O13437|FDH_CANBO 25 370 + 346 Gaps:9 97.53 364 52.68 5e-127 Formate dehydrogenase OS Candida boidinii GN FDH1 PE 1 SV 1
blastp_uniprot_sprot sp|P33677|FDH_PICAN 25 370 + 346 Gaps:9 98.07 362 52.11 2e-123 Formate dehydrogenase OS Pichia angusta GN FMDH PE 3 SV 2
blastp_uniprot_sprot sp|Q07103|FDH_NEUCR 25 370 + 346 Gaps:9 94.67 375 52.39 6e-120 Formate dehydrogenase OS Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN fdh PE 2 SV 1
blastp_uniprot_sprot sp|P33160|FDH_PSESR 42 368 + 327 none 81.55 401 51.07 4e-112 Formate dehydrogenase OS Pseudomonas sp. (strain 101) PE 1 SV 3

11 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SUPERFAMILY 36 161 126 SSF52283 none none none
SUPERFAMILY 143 329 187 SSF51735 none none none
Gene3D 179 335 157 G3DSA:3.40.50.720 none none IPR016040
ProSitePatterns 188 215 28 PS00065 none D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. IPR029752
ProSitePatterns 238 260 23 PS00670 none D-isomer specific 2-hydroxyacid dehydrogenases signature 2. IPR029753
ProSitePatterns 267 283 17 PS00671 none D-isomer specific 2-hydroxyacid dehydrogenases signature 3. IPR029753
Pfam 150 328 179 PF02826 none D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IPR006140
Gene3D 24 176 153 G3DSA:3.40.50.720 none none IPR016040
PANTHER 14 370 357 PTHR10996 none none none
Pfam 61 355 295 PF00389 none D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain IPR006139
PANTHER 14 370 357 PTHR10996:SF16 none none none

0 Localization

3 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2003_QTL2_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 87 lod 3,3 8,7
Bourran2_2004_QTL9_peak_Bud_burst_3P Qrob_Chr02 2 s_1C34E9_788 v_12238_322 50 25 75 lod 4,4 10,1
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL2_d13Cf Qrob_Chr02 2 s_1AQA4Z_1644 s_1AK5QX_947 53.67 14,01 79,68 lod 5.6594 0.03

0 Targeting