Protein : Qrob_P0484170.2 Q. robur
Protein Identifier  ? Qrob_P0484170.2 Organism . Name  Quercus robur
Score  14.1 Score Type  egn
Protein Description  (M=2) 1.2.1.2 - Formate dehydrogenase. Code Enzyme  EC:1.2.1.2
Gene Prediction Quality  validated Protein length 

Sequence

Length: 328  
Kegg Orthology  K00122
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0008152 metabolic process The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
GO:0055114 oxidation-reduction process A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor Catalysis of an oxidation-reduction (redox) reaction in which a CH-OH group acts as a hydrogen or electron donor and reduces NAD+ or NADP.
GO:0051287 NAD binding Interacting selectively and non-covalently with nicotinamide adenine dinucleotide, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NAD+, or the reduced form, NADH.

42 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|rcu:RCOM_0850640 2 327 + 326 Gaps:28 91.71 386 83.33 0.0 formate dehydrogenase putative (EC:1.2.1.2)
blastp_kegg lcl|vvi:100261093 2 327 + 326 Gaps:28 92.43 383 83.05 0.0 formate dehydrogenase mitochondrial-like
blastp_kegg lcl|pda:103705850 2 326 + 325 Gaps:28 92.17 383 81.59 0.0 formate dehydrogenase mitochondrial
blastp_kegg lcl|cam:101502705 2 327 + 326 Gaps:28 91.47 387 83.05 0.0 formate dehydrogenase 1 mitochondrial-like
blastp_kegg lcl|tcc:TCM_016872 2 327 + 326 Gaps:28 92.67 382 81.36 0.0 Formate dehydrogenase
blastp_kegg lcl|gmx:100797606 2 327 + 326 Gaps:28 92.91 381 81.64 0.0 formate dehydrogenase mitochondrial-like
blastp_kegg lcl|cmo:103487087 2 327 + 326 Gaps:28 92.19 384 81.92 0.0 formate dehydrogenase mitochondrial
blastp_kegg lcl|pxb:103926915 2 327 + 326 Gaps:28 91.95 385 82.49 0.0 formate dehydrogenase 1 mitochondrial-like
blastp_kegg lcl|pda:103701979 2 326 + 325 Gaps:28 92.17 383 81.30 0.0 formate dehydrogenase mitochondrial
blastp_kegg lcl|pxb:103963948 2 327 + 326 Gaps:28 91.95 385 82.49 0.0 formate dehydrogenase mitochondrial-like
blastp_pdb 3naq_B 2 327 + 326 Gaps:28 99.16 357 76.55 0.0 mol:protein length:357 Formate dehydrogenase
blastp_pdb 3naq_A 2 327 + 326 Gaps:28 99.16 357 76.55 0.0 mol:protein length:357 Formate dehydrogenase
blastp_pdb 3n7u_L 6 327 + 322 Gaps:28 99.72 351 77.14 0.0 mol:protein length:351 Formate dehydrogenase
blastp_pdb 3n7u_K 6 327 + 322 Gaps:28 99.72 351 77.14 0.0 mol:protein length:351 Formate dehydrogenase
blastp_pdb 3n7u_J 6 327 + 322 Gaps:28 99.72 351 77.14 0.0 mol:protein length:351 Formate dehydrogenase
blastp_pdb 3n7u_I 6 327 + 322 Gaps:28 99.72 351 77.14 0.0 mol:protein length:351 Formate dehydrogenase
blastp_pdb 3n7u_H 6 327 + 322 Gaps:28 99.72 351 77.14 0.0 mol:protein length:351 Formate dehydrogenase
blastp_pdb 3n7u_G 6 327 + 322 Gaps:28 99.72 351 77.14 0.0 mol:protein length:351 Formate dehydrogenase
blastp_pdb 3n7u_F 6 327 + 322 Gaps:28 99.72 351 77.14 0.0 mol:protein length:351 Formate dehydrogenase
blastp_pdb 3n7u_E 6 327 + 322 Gaps:28 99.72 351 77.14 0.0 mol:protein length:351 Formate dehydrogenase
blastp_uniprot_sprot sp|Q07511|FDH_SOLTU 2 327 + 326 Gaps:28 92.91 381 79.66 0.0 Formate dehydrogenase mitochondrial OS Solanum tuberosum GN FDH1 PE 1 SV 2
blastp_uniprot_sprot sp|Q9SXP2|FDH1_ORYSJ 3 327 + 325 Gaps:28 93.88 376 79.60 0.0 Formate dehydrogenase 1 mitochondrial OS Oryza sativa subsp. japonica GN Os06g0486800 PE 1 SV 2
blastp_uniprot_sprot sp|Q9ZRI8|FDH_HORVU 3 327 + 325 Gaps:28 93.63 377 78.47 0.0 Formate dehydrogenase mitochondrial OS Hordeum vulgare PE 2 SV 1
blastp_uniprot_sprot sp|Q67U69|FDH2_ORYSJ 3 327 + 325 Gaps:28 93.39 378 76.20 0.0 Formate dehydrogenase 2 mitochondrial OS Oryza sativa subsp. japonica GN Os06g0486900 PE 2 SV 1
blastp_uniprot_sprot sp|Q9S7E4|FDH_ARATH 2 327 + 326 Gaps:28 92.19 384 76.55 0.0 Formate dehydrogenase mitochondrial OS Arabidopsis thaliana GN FDH1 PE 1 SV 1
blastp_uniprot_sprot sp|Q03134|FDH_EMENI 8 325 + 318 Gaps:37 97.26 365 48.73 3e-112 Probable formate dehydrogenase OS Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN aciA PE 2 SV 3
blastp_uniprot_sprot sp|O13437|FDH_CANBO 8 325 + 318 Gaps:37 97.53 364 48.17 3e-110 Formate dehydrogenase OS Candida boidinii GN FDH1 PE 1 SV 1
blastp_uniprot_sprot sp|P33677|FDH_PICAN 8 325 + 318 Gaps:37 98.07 362 47.61 1e-107 Formate dehydrogenase OS Pichia angusta GN FMDH PE 3 SV 2
blastp_uniprot_sprot sp|Q07103|FDH_NEUCR 8 325 + 318 Gaps:37 94.67 375 46.48 2e-104 Formate dehydrogenase OS Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN fdh PE 2 SV 1
blastp_uniprot_sprot sp|P33160|FDH_PSESR 25 323 + 299 Gaps:28 81.55 401 47.09 2e-95 Formate dehydrogenase OS Pseudomonas sp. (strain 101) PE 1 SV 3

10 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 179 283 105 PF02826 none D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IPR006140
Pfam 42 311 270 PF00389 none D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain IPR006139
PANTHER 1 325 325 PTHR10996 none none none
ProSitePatterns 222 238 17 PS00671 none D-isomer specific 2-hydroxyacid dehydrogenases signature 3. IPR029753
SUPERFAMILY 19 144 126 SSF52283 none none none
SUPERFAMILY 126 284 159 SSF51735 none none none
Gene3D 7 159 153 G3DSA:3.40.50.720 none none IPR016040
PANTHER 1 325 325 PTHR10996:SF16 none none none
ProSitePatterns 193 215 23 PS00670 none D-isomer specific 2-hydroxyacid dehydrogenases signature 2. IPR029753
Gene3D 176 283 108 G3DSA:3.40.50.720 none none IPR016040

0 Localization

3 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2003_QTL2_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 87 lod 3,3 8,7
Bourran2_2004_QTL9_peak_Bud_burst_3P Qrob_Chr02 2 s_1C34E9_788 v_12238_322 50 25 75 lod 4,4 10,1
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL2_d13Cf Qrob_Chr02 2 s_1AQA4Z_1644 s_1AK5QX_947 53.67 14,01 79,68 lod 5.6594 0.03

0 Targeting