Protein : Qrob_P0479380.2 Q. robur
Protein Identifier  ? Qrob_P0479380.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=1) K08334 - beclin 1 Gene Prediction Quality  validated
Protein length 

Sequence

Length: 401  
Kegg Orthology  K08334
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Protein Sequence Displayer

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0 Synonyms

1 GO Terms

Identifier Name Description
GO:0006914 autophagy The process in which cells digest parts of their own cytoplasm; allows for both recycling of macromolecular constituents under conditions of cellular stress and remodeling the intracellular structure for cell differentiation.

23 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pper:PRUPE_ppa004470mg 1 400 + 400 Gaps:43 84.06 508 75.64 0.0 hypothetical protein
blastp_kegg lcl|pmum:103332241 1 400 + 400 Gaps:42 84.02 507 76.06 0.0 beclin-1-like protein
blastp_kegg lcl|mdm:103439329 1 400 + 400 Gaps:44 84.36 505 71.36 0.0 atg6 beclin-1-like protein
blastp_kegg lcl|fve:101291752 1 400 + 400 Gaps:43 83.89 509 75.64 0.0 beclin-1-like protein-like
blastp_kegg lcl|vvi:100232897 2 400 + 399 Gaps:47 83.52 522 73.62 0.0 ATG6 beclin 1 protein
blastp_kegg lcl|rcu:RCOM_0718600 1 400 + 400 Gaps:40 82.98 523 74.88 0.0 Beclin-1 putative
blastp_kegg lcl|pop:POPTR_0002s17130g 1 400 + 400 Gaps:39 83.53 516 74.01 0.0 POPTRDRAFT_816633 autophagy protein Apg6
blastp_kegg lcl|tcc:TCM_005158 3 400 + 398 Gaps:49 82.92 527 73.00 0.0 Autophagy 6 isoform 1
blastp_kegg lcl|cic:CICLE_v10019746mg 3 400 + 398 Gaps:40 82.95 516 74.53 0.0 hypothetical protein
blastp_kegg lcl|cit:102619358 3 400 + 398 Gaps:40 82.95 516 74.53 0.0 beclin-1-like protein-like
blastp_pdb 4ddp_A 280 378 + 99 Gaps:38 65.24 210 29.20 6e-13 mol:protein length:210 Beclin-1
blastp_uniprot_sprot sp|Q9M367|BECN1_ARATH 3 400 + 398 Gaps:38 83.17 517 67.44 0.0 Beclin-1-like protein OS Arabidopsis thaliana GN At3g61710 PE 2 SV 2
blastp_uniprot_sprot sp|Q54JI9|BECNB_DICDI 156 390 + 235 Gaps:45 32.28 855 30.80 1e-31 Beclin-1-like protein B OS Dictyostelium discoideum GN atg6B PE 3 SV 1
blastp_uniprot_sprot sp|Q6GP52|BECN1_XENLA 64 400 + 337 Gaps:73 82.70 445 28.80 6e-30 Beclin-1 OS Xenopus laevis GN becn1 PE 2 SV 1
blastp_uniprot_sprot sp|Q4A1L3|BECN1_XENTR 64 400 + 337 Gaps:73 82.70 445 28.80 9e-30 Beclin-1 OS Xenopus tropicalis GN becn1 PE 2 SV 1
blastp_uniprot_sprot sp|Q4A1L5|BECN1_PIG 64 400 + 337 Gaps:78 82.37 448 28.46 5e-27 Beclin-1 OS Sus scrofa GN BECN1 PE 2 SV 1
blastp_uniprot_sprot sp|O88597|BECN1_MOUSE 64 400 + 337 Gaps:74 82.37 448 27.91 3e-26 Beclin-1 OS Mus musculus GN Becn1 PE 1 SV 3
blastp_uniprot_sprot sp|Q14457|BECN1_HUMAN 64 400 + 337 Gaps:65 82.22 450 27.03 5e-26 Beclin-1 OS Homo sapiens GN BECN1 PE 1 SV 2
blastp_uniprot_sprot sp|Q5R878|BECN1_PONAB 64 400 + 337 Gaps:65 82.22 450 27.03 6e-26 Beclin-1 OS Pongo abelii GN BECN1 PE 2 SV 1
blastp_uniprot_sprot sp|Q91XJ1|BECN1_RAT 64 400 + 337 Gaps:74 82.37 448 27.64 1e-25 Beclin-1 OS Rattus norvegicus GN Becn1 PE 1 SV 1
blastp_uniprot_sprot sp|Q4A1L4|BECN1_BOVIN 64 400 + 337 Gaps:74 82.37 448 27.64 2e-25 Beclin-1 OS Bos taurus GN BECN1 PE 2 SV 1
rpsblast_cdd gnl|CDD|112906 149 332 + 184 none 51.69 356 30.43 5e-32 pfam04111 APG6 Autophagy protein Apg6. In yeast 15 Apg proteins coordinate the formation of autophagosomes. Autophagy is a bulk degradation process induced by starvation in eukaryotic cells. Apg6/Vps30p has two distinct functions in the autophagic process either associated with the membrane or in a retrieval step of the carboxypeptidase Y sorting pathway.
rpsblast_kog gnl|CDD|37962 28 392 + 365 Gaps:46 88.81 447 42.82 9e-90 KOG2751 KOG2751 KOG2751 Beclin-like protein [Signal transduction mechanisms].

5 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 168 333 166 PF04111 none Autophagy protein Apg6 IPR007243
PANTHER 4 400 397 PTHR12768 none none IPR007243
Coils 215 264 50 Coil none none none
PANTHER 4 400 397 PTHR12768:SF4 none none none
Coils 178 206 29 Coil none none none

0 Localization

1 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2004_QTL4_peak_Bud_burst_3P Qrob_Chr04 4 s_1AHUWN_1101 s_1BRNG7_1618 30,55 0 47,55 lod 2,8 7,4

0 Targeting