Protein : Qrob_P0479090.2 Q. robur
Protein Identifier  ? Qrob_P0479090.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=1) K02519 - translation initiation factor IF-2 Code Enzyme  EC:3.6.5.3
Gene Prediction Quality  validated Protein length 

Sequence

Length: 1003  
Kegg Orthology  K02519
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0 Synonyms

5 GO Terms

Identifier Name Description
GO:0005622 intracellular The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
GO:0005525 GTP binding Interacting selectively and non-covalently with GTP, guanosine triphosphate.
GO:0003743 translation initiation factor activity Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide.
GO:0003924 GTPase activity Catalysis of the reaction: GTP + H2O = GDP + phosphate.
GO:0006413 translational initiation The process preceding formation of the peptide bond between the first two amino acids of a protein. This includes the formation of a complex of the ribosome, mRNA, and an initiation complex that contains the first aminoacyl-tRNA.

47 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pxb:103945944 1 999 + 999 Gaps:49 99.52 1033 73.93 0.0 translation initiation factor IF-2 chloroplastic
blastp_kegg lcl|pxb:103936187 1 999 + 999 Gaps:47 99.52 1031 74.56 0.0 translation initiation factor IF-2 chloroplastic-like
blastp_kegg lcl|mdm:103445760 1 999 + 999 Gaps:47 99.52 1031 74.66 0.0 translation initiation factor IF-2 chloroplastic
blastp_kegg lcl|fve:101299274 1 1001 + 1001 Gaps:50 99.90 1028 74.98 0.0 translation initiation factor IF-2 chloroplastic-like
blastp_kegg lcl|pper:PRUPE_ppa000701mg 1 1001 + 1001 Gaps:45 99.90 1029 75.29 0.0 hypothetical protein
blastp_kegg lcl|cmo:103487645 1 1001 + 1001 Gaps:46 99.90 1024 72.24 0.0 translation initiation factor IF-2 chloroplastic
blastp_kegg lcl|pmum:103325866 1 1001 + 1001 Gaps:45 99.90 1029 75.00 0.0 translation initiation factor IF-2 chloroplastic
blastp_kegg lcl|rcu:RCOM_0477800 1 1000 + 1000 Gaps:64 99.52 1033 73.54 0.0 mitochondrial translational initiation factor putative
blastp_kegg lcl|cit:102630147 1 1001 + 1001 Gaps:76 99.90 1018 74.14 0.0 translation initiation factor IF-2 chloroplastic-like
blastp_kegg lcl|csv:101216442 1 1001 + 1001 Gaps:47 99.90 1023 71.33 0.0 translation initiation factor IF-2 chloroplastic-like
blastp_pdb 1zo1_I 480 983 + 504 Gaps:19 99.60 501 50.30 1e-144 mol:protein length:501 translation initiation factor 2
blastp_pdb 3izy_P 480 975 + 496 Gaps:48 99.44 537 41.39 1e-110 mol:protein length:537 Translation initiation factor IF-2 mitochond
blastp_pdb 2lkd_A 476 649 + 174 Gaps:10 98.88 178 65.91 4e-67 mol:protein length:178 Translation initiation factor IF-2
blastp_pdb 2lkc_A 476 649 + 174 Gaps:10 98.88 178 65.91 4e-67 mol:protein length:178 Translation initiation factor IF-2
blastp_pdb 1g7t_A 480 962 + 483 Gaps:141 89.23 594 26.60 5e-32 mol:protein length:594 TRANSLATION INITIATION FACTOR IF2/EIF5B
blastp_pdb 1g7s_A 480 962 + 483 Gaps:141 89.23 594 26.60 5e-32 mol:protein length:594 TRANSLATION INITIATION FACTOR IF2/EIF5B
blastp_pdb 1g7r_A 480 962 + 483 Gaps:141 89.23 594 26.60 5e-32 mol:protein length:594 TRANSLATION INITIATION FACTOR IF2/EIF5B
blastp_pdb 1z9b_A 762 878 + 117 Gaps:5 82.96 135 40.18 2e-19 mol:protein length:135 Translation initiation factor IF-2
blastp_pdb 1d1n_A 887 975 + 89 Gaps:1 90.91 99 46.67 1e-17 mol:protein length:99 INITIATION FACTOR 2
blastp_pdb 1efm_A 475 625 + 151 Gaps:13 42.22 379 36.25 2e-10 mol:protein length:379 ELONGATION FACTOR TU
blastp_uniprot_sprot sp|P57997|IF2C_PHAVU 1 985 + 985 Gaps:75 98.81 1012 71.70 0.0 Translation initiation factor IF-2 chloroplastic OS Phaseolus vulgaris GN IF2CP PE 2 SV 1
blastp_uniprot_sprot sp|Q9SHI1|IF2C_ARATH 1 1000 + 1000 Gaps:63 99.71 1026 68.62 0.0 Translation initiation factor IF-2 chloroplastic OS Arabidopsis thaliana GN At1g17220 PE 2 SV 2
blastp_uniprot_sprot sp|B2J955|IF2_NOSP7 402 984 + 583 Gaps:19 54.73 1056 55.88 0.0 Translation initiation factor IF-2 OS Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN infB PE 3 SV 1
blastp_uniprot_sprot sp|Q3MBZ7|IF2_ANAVT 402 984 + 583 Gaps:19 55.68 1038 55.19 0.0 Translation initiation factor IF-2 OS Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN infB PE 3 SV 1
blastp_uniprot_sprot sp|B8HUA9|IF2_CYAP4 373 984 + 612 Gaps:19 60.40 1005 52.72 0.0 Translation initiation factor IF-2 OS Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN infB PE 3 SV 1
blastp_uniprot_sprot sp|Q318P8|IF2_PROM9 373 986 + 614 Gaps:15 54.34 1128 50.90 0.0 Translation initiation factor IF-2 OS Prochlorococcus marinus (strain MIT 9312) GN infB PE 3 SV 1
blastp_uniprot_sprot sp|Q31LL9|IF2_SYNE7 361 985 + 625 Gaps:17 60.39 1030 51.45 0.0 Translation initiation factor IF-2 OS Synechococcus elongatus (strain PCC 7942) GN infB PE 3 SV 1
blastp_uniprot_sprot sp|Q8YQJ1|IF2_NOSS1 401 984 + 584 Gaps:19 55.73 1039 54.58 0.0 Translation initiation factor IF-2 OS Nostoc sp. (strain PCC 7120 / UTEX 2576) GN infB PE 3 SV 1
blastp_uniprot_sprot sp|P72689|IF2_SYNY3 399 984 + 586 Gaps:13 58.44 1001 53.33 0.0 Translation initiation factor IF-2 OS Synechocystis sp. (strain PCC 6803 / Kazusa) GN infB PE 3 SV 1
blastp_uniprot_sprot sp|Q10XM3|IF2_TRIEI 401 984 + 584 Gaps:22 54.58 1059 54.33 0.0 Translation initiation factor IF-2 OS Trichodesmium erythraeum (strain IMS101) GN infB PE 3 SV 1

31 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 482 639 158 PF00009 none Elongation factor Tu GTP binding domain none
Phobius 26 1002 977 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 1 12 12 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
PRINTS 483 496 14 PR00315 none GTP-binding elongation factor signature IPR000795
PRINTS 551 562 12 PR00315 none GTP-binding elongation factor signature IPR000795
PRINTS 535 545 11 PR00315 none GTP-binding elongation factor signature IPR000795
Phobius 22 25 4 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
PANTHER 331 396 66 PTHR23115:SF41 none none IPR015760
PANTHER 902 1002 101 PTHR23115:SF41 none none IPR015760
Gene3D 473 637 165 G3DSA:3.40.50.300 none none IPR027417
PANTHER 331 396 66 PTHR23115 none none none
PANTHER 902 1002 101 PTHR23115 none none none
SUPERFAMILY 888 982 95 SSF50447 none none IPR009000
SUPERFAMILY 780 892 113 SSF52156 none none IPR023115
Gene3D 887 983 97 G3DSA:2.40.30.10 none none none
Gene3D 785 864 80 G3DSA:3.40.50.10050 none none IPR023115
PANTHER 472 738 267 PTHR23115 none none none
PANTHER 472 738 267 PTHR23115:SF41 none none IPR015760
Phobius 1 25 25 SIGNAL_PEPTIDE none Signal peptide region none
SUPERFAMILY 649 732 84 SSF50447 none none IPR009000
TIGRFAM 481 636 156 TIGR00231 none small_GTP: small GTP-binding protein domain IPR005225
Coils 732 760 29 Coil none none none
Hamap 9 982 974 MF_00100_B none Translation initiation factor IF-2 [infB]. IPR000178
ProSiteProfiles 479 646 168 PS51722 none Translational (tr)-type guanine nucleotide-binding (G) domain profile. IPR000795
Phobius 13 21 9 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
Pfam 781 875 95 PF11987 none Translation-initiation factor 2 IPR023115
TIGRFAM 399 984 586 TIGR00487 none IF-2: translation initiation factor IF-2 IPR000178
Gene3D 648 740 93 G3DSA:2.40.30.10 none none none
Pfam 667 728 62 PF03144 none Elongation factor Tu domain 2 IPR004161
ProSitePatterns 935 957 23 PS01176 none Initiation factor 2 signature. IPR000178

0 Localization

0 Qtllist

0 Targeting