Protein : Qrob_P0474060.2 Q. robur
Protein Identifier  ? Qrob_P0474060.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=1) K03065 - 26S proteasome regulatory subunit T5 Code Enzyme  EC:3.4.25.1
Gene Prediction Quality  validated Protein length 

Sequence

Length: 372  
Kegg Orthology  K03065
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0005524 ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO:0005737 cytoplasm All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
GO:0016787 hydrolase activity Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.
GO:0030163 protein catabolic process The chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds.

50 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|tcc:TCM_026659 6 371 + 366 Gaps:18 90.78 423 94.01 0.0 Regulatory particle triple-A ATPase 5A
blastp_kegg lcl|pper:PRUPE_ppa006192mg 6 371 + 366 Gaps:18 90.78 423 93.75 0.0 hypothetical protein
blastp_kegg lcl|pop:POPTR_0013s01750g 6 371 + 366 Gaps:18 90.78 423 93.75 0.0 POPTRDRAFT_834472 26S proteasome AAA-ATPase subunit family protein
blastp_kegg lcl|fve:101308100 6 371 + 366 Gaps:18 90.57 424 93.75 0.0 26S protease regulatory subunit 6A homolog A-like
blastp_kegg lcl|cic:CICLE_v10001269mg 6 371 + 366 Gaps:18 90.78 423 93.75 0.0 hypothetical protein
blastp_kegg lcl|cit:102615113 6 371 + 366 Gaps:18 90.78 423 93.75 0.0 26S protease regulatory subunit 6A homolog
blastp_kegg lcl|pvu:PHAVU_007G197100g 6 371 + 366 Gaps:18 90.78 423 93.75 0.0 hypothetical protein
blastp_kegg lcl|gmx:100788486 6 371 + 366 Gaps:18 90.78 423 93.75 0.0 26S protease regulatory subunit 6A homolog A-like
blastp_kegg lcl|cam:101496953 6 371 + 366 Gaps:18 90.78 423 94.01 0.0 26S protease regulatory subunit 6A homolog
blastp_kegg lcl|mtr:MTR_1g083330 6 371 + 366 Gaps:18 90.78 423 93.75 0.0 26S protease regulatory subunit 6A-like protein
blastp_pdb 3h4m_C 126 359 + 234 none 82.11 285 56.41 2e-92 mol:protein length:285 Proteasome-activating nucleotidase
blastp_pdb 3h4m_B 126 359 + 234 none 82.11 285 56.41 2e-92 mol:protein length:285 Proteasome-activating nucleotidase
blastp_pdb 3h4m_A 126 359 + 234 none 82.11 285 56.41 2e-92 mol:protein length:285 Proteasome-activating nucleotidase
blastp_pdb 1lv7_A 126 354 + 229 Gaps:4 87.55 257 45.78 8e-61 mol:protein length:257 FtsH
blastp_pdb 2cea_F 126 361 + 236 Gaps:4 48.74 476 46.98 3e-60 mol:protein length:476 CELL DIVISION PROTEIN FTSH
blastp_pdb 2cea_E 126 361 + 236 Gaps:4 48.74 476 46.98 3e-60 mol:protein length:476 CELL DIVISION PROTEIN FTSH
blastp_pdb 2cea_D 126 361 + 236 Gaps:4 48.74 476 46.98 3e-60 mol:protein length:476 CELL DIVISION PROTEIN FTSH
blastp_pdb 2cea_C 126 361 + 236 Gaps:4 48.74 476 46.98 3e-60 mol:protein length:476 CELL DIVISION PROTEIN FTSH
blastp_pdb 2cea_B 126 361 + 236 Gaps:4 48.74 476 46.98 3e-60 mol:protein length:476 CELL DIVISION PROTEIN FTSH
blastp_pdb 2cea_A 126 361 + 236 Gaps:4 48.74 476 46.98 3e-60 mol:protein length:476 CELL DIVISION PROTEIN FTSH
blastp_uniprot_sprot sp|P46465|PRS6A_ORYSJ 6 371 + 366 Gaps:18 89.51 429 92.97 0.0 26S protease regulatory subunit 6A homolog OS Oryza sativa subsp. japonica GN TBP1 PE 2 SV 2
blastp_uniprot_sprot sp|P54776|PRS6A_SOLLC 6 371 + 366 Gaps:18 90.78 423 92.45 0.0 26S protease regulatory subunit 6A homolog OS Solanum lycopersicum GN TBP1 PE 2 SV 1
blastp_uniprot_sprot sp|O23894|PRS6A_BRACM 6 371 + 366 Gaps:18 90.57 424 91.93 0.0 26S protease regulatory subunit 6A homolog OS Brassica campestris GN TBP1 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SEI2|PS6AA_ARATH 6 371 + 366 Gaps:18 90.57 424 91.93 0.0 26S protease regulatory subunit 6A homolog A OS Arabidopsis thaliana GN RPT5A PE 1 SV 1
blastp_uniprot_sprot sp|O04019|PS6AB_ARATH 6 371 + 366 Gaps:18 90.78 423 91.41 0.0 26S protease regulatory subunit 6A homolog B OS Arabidopsis thaliana GN RPT5B PE 1 SV 3
blastp_uniprot_sprot sp|P17980|PRS6A_HUMAN 7 371 + 365 Gaps:19 87.02 439 76.96 0.0 26S protease regulatory subunit 6A OS Homo sapiens GN PSMC3 PE 1 SV 3
blastp_uniprot_sprot sp|Q63569|PRS6A_RAT 7 371 + 365 Gaps:19 87.02 439 76.96 0.0 26S protease regulatory subunit 6A OS Rattus norvegicus GN Psmc3 PE 2 SV 1
blastp_uniprot_sprot sp|O88685|PRS6A_MOUSE 7 371 + 365 Gaps:19 86.43 442 76.96 0.0 26S protease regulatory subunit 6A OS Mus musculus GN Psmc3 PE 1 SV 2
blastp_uniprot_sprot sp|O42586|PR6AB_XENLA 7 371 + 365 Gaps:19 94.55 404 76.18 0.0 26S protease regulatory subunit 6A-B OS Xenopus laevis GN psmc3-b PE 2 SV 1
blastp_uniprot_sprot sp|Q54PN7|PRS6A_DICDI 12 371 + 360 Gaps:30 86.94 421 74.32 0.0 26S protease regulatory subunit 6A homolog OS Dictyostelium discoideum GN psmC3 PE 1 SV 1

10 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Gene3D 126 297 172 G3DSA:3.40.50.300 none none IPR027417
PANTHER 6 371 366 PTHR23073:SF7 none none none
SUPERFAMILY 126 360 235 SSF52540 none none IPR027417
PANTHER 6 371 366 PTHR23073 none none none
SMART 151 290 140 SM00382 none ATPases associated with a variety of cellular activities IPR003593
TIGRFAM 23 358 336 TIGR01242 "Reactome:REACT_11045","Reactome:REACT_13","Reactome:REACT_13635","Reactome:REACT_152","Reactome:REACT_1538","Reactome:REACT_383","Reactome:REACT_578","Reactome:REACT_6185","Reactome:REACT_6850" 26Sp45: 26S proteasome subunit P45 family IPR005937
Coils 8 36 29 Coil none none none
ProSitePatterns 258 276 19 PS00674 none AAA-protein family signature. IPR003960
Gene3D 298 360 63 G3DSA:1.10.8.60 none none none
Pfam 155 287 133 PF00004 none ATPase family associated with various cellular activities (AAA) IPR003959

0 Localization

6 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran_2000_2002_QTL6_Delta.F Qrob_Chr03 3 s_2HYXJ2_207 s_1AUAXK_317 29.12 6,3 45,37 lod 3.1666 0.026
Bourran2_2014_nLBD_3P Qrob_Chr03 3 s_1ET7H8_604 s_1BYNB5_834 23,73 0 46,72 lod 1,7573 3,8
PM_1999_QTL14_peak_Bud_burst_3P Qrob_Chr03 3 s_2F0SI1_756 v_6056_735 11,78 3,78 50,78 lod 2,5 4,5
Bourran2_2014_rEpiBC*_3P Qrob_Chr03 3 s_1A3B3X_1163 s_1DKGMO_450 23,04 4,92 41,12 lod 2,5668 7

0 Targeting