Protein : Qrob_P0472570.2 Q. robur
Protein Identifier  ? Qrob_P0472570.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=2) PTHR22951//PTHR22951:SF17 - CLATHRIN ASSEMBLY PROTEIN // SUBFAMILY NOT NAMED (PTHR22951:SF17) Gene Prediction Quality  validated
Protein length 

Sequence

Length: 179  
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0 Synonyms

1 GO Terms

Identifier Name Description
GO:0005543 phospholipid binding Interacting selectively and non-covalently with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester.

17 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|mdm:103451560 3 140 + 138 Gaps:56 34.94 561 57.65 7e-39 putative clathrin assembly protein At2g01600
blastp_kegg lcl|pper:PRUPE_ppa003610mg 3 78 + 76 none 13.52 562 86.84 8e-39 hypothetical protein
blastp_kegg lcl|pop:POPTR_0008s13140g 3 78 + 76 none 13.52 562 86.84 1e-38 POPTRDRAFT_564639 clathrin assembly family protein
blastp_kegg lcl|vvi:100254309 3 78 + 76 none 13.40 567 86.84 1e-38 putative clathrin assembly protein At2g01600-like
blastp_kegg lcl|tcc:TCM_010974 3 104 + 102 none 18.41 565 87.50 2e-38 ENTH/ANTH/VHS superfamily protein
blastp_kegg lcl|cam:101510284 3 135 + 133 Gaps:2 23.94 564 74.07 2e-38 putative clathrin assembly protein At2g01600-like
blastp_kegg lcl|gmx:100794160 3 118 + 116 Gaps:1 20.95 568 80.67 2e-38 putative clathrin assembly protein At2g01600-like
blastp_kegg lcl|csv:101205968 3 78 + 76 none 13.43 566 86.84 2e-38 putative clathrin assembly protein At2g01600-like
blastp_kegg lcl|rcu:RCOM_0629240 3 104 + 102 none 18.34 567 86.54 3e-38 clathrin assembly protein putative (EC:1.3.1.74)
blastp_kegg lcl|pop:POPTR_0010s12020g 3 78 + 76 none 13.84 549 85.53 3e-38 POPTRDRAFT_1090667 hypothetical protein
blastp_uniprot_sprot sp|P94017|CAP9_ARATH 5 118 + 114 none 16.76 692 74.14 1e-37 Putative clathrin assembly protein At1g14910 OS Arabidopsis thaliana GN At1g14910 PE 2 SV 2
blastp_uniprot_sprot sp|Q8LBH2|CAP8_ARATH 3 118 + 116 none 20.67 571 75.42 2e-36 Putative clathrin assembly protein At2g01600 OS Arabidopsis thaliana GN At2g01600 PE 2 SV 2
blastp_uniprot_sprot sp|Q9LVD8|CAP7_ARATH 3 78 + 76 Gaps:1 12.69 591 73.33 8e-30 Putative clathrin assembly protein At5g57200 OS Arabidopsis thaliana GN At5g57200 PE 3 SV 1
blastp_uniprot_sprot sp|Q8VYT2|CAP6_ARATH 3 81 + 79 Gaps:7 14.31 601 65.12 8e-29 Putative clathrin assembly protein At4g25940 OS Arabidopsis thaliana GN At4g25940 PE 2 SV 1
blastp_uniprot_sprot sp|Q9LHS0|CAP10_ARATH 5 78 + 74 Gaps:12 11.40 544 66.13 5e-18 Putative clathrin assembly protein At5g35200 OS Arabidopsis thaliana GN At5g35200 PE 1 SV 1
rpsblast_cdd gnl|CDD|203708 4 78 + 75 none 26.98 278 37.33 1e-17 pfam07651 ANTH ANTH domain. AP180 is an endocytotic accessory proteins that has been implicated in the formation of clathrin-coated pits. The domain is involved in phosphatidylinositol 4 5-bisphosphate binding and is a universal adaptor for nucleation of clathrin coats.
rpsblast_kog gnl|CDD|35472 3 108 + 106 Gaps:15 18.53 491 41.76 4e-16 KOG0251 KOG0251 KOG0251 Clathrin assembly protein AP180 and related proteins contain ENTH domain [Signal transduction mechanisms Intracellular trafficking secretion and vesicular transport].

7 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SUPERFAMILY 2 33 32 SSF48464 none none IPR008942
Pfam 4 81 78 PF07651 none ANTH domain IPR011417
ProSiteProfiles 1 32 32 PS50942 none ENTH domain profile. IPR013809
PANTHER 5 78 74 PTHR22951 none none none
Gene3D 4 28 25 G3DSA:1.25.40.90 none none IPR008942
PANTHER 5 78 74 PTHR22951:SF17 none none none
SUPERFAMILY 46 84 39 SSF89009 none none none

0 Localization

3 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nSeqBC_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,06 25,47 27,72 lod 3.6 7.1
Bourran2_2015_nEpis_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 34,94 34,88 37,45 lod 3.1 7
Bourran2_2015_nEpiBC_A4 Qrob_Chr07 7 s_1DP9TW_798 v_8128_173 22,61 22,14 22,73 lod 3.1 8.5

0 Targeting