Protein : Qrob_P0470500.2 Q. robur
Protein Identifier  ? Qrob_P0470500.2 Organism . Name  Quercus robur
Score  9.2 Score Type  egn
Protein Description  (M=7) K12479 - vacuolar protein sorting-associated protein 45 Gene Prediction Quality  validated
Protein length 

Sequence

Length: 379  
Kegg Orthology  K12479
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0016192 vesicle-mediated transport A cellular transport process in which transported substances are moved in membrane-bounded vesicles; transported substances are enclosed in the vesicle lumen or located in the vesicle membrane. The process begins with a step that directs a substance to the forming vesicle, and includes vesicle budding and coating. Vesicles are then targeted to, and fuse with, an acceptor membrane.
GO:0006904 vesicle docking involved in exocytosis The initial attachment of a vesicle membrane to a target membrane, mediated by proteins protruding from the membrane of the vesicle and the target membrane, that contributes to exocytosis.

36 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pxb:103940154 1 378 + 378 none 66.67 567 90.21 0.0 vacuolar protein sorting-associated protein 45 homolog
blastp_kegg lcl|pxb:103940149 1 378 + 378 none 66.67 567 90.21 0.0 vacuolar protein sorting-associated protein 45 homolog
blastp_kegg lcl|tcc:TCM_035451 1 378 + 378 none 66.55 568 88.89 0.0 Vacuolar protein sorting 45
blastp_kegg lcl|pxb:103951154 1 378 + 378 none 66.67 567 89.68 0.0 vacuolar protein sorting-associated protein 45 homolog
blastp_kegg lcl|mdm:103437229 1 378 + 378 none 66.67 567 89.42 0.0 vacuolar protein sorting-associated protein 45 homolog
blastp_kegg lcl|pper:PRUPEppa002616m2g 1 378 + 378 none 64.18 589 89.95 0.0 hypothetical protein
blastp_kegg lcl|vvi:100243832 1 378 + 378 none 66.55 568 90.74 0.0 vacuolar protein sorting-associated protein 45 homolog-like
blastp_kegg lcl|cic:CICLE_v10000721mg 1 378 + 378 none 66.55 568 88.36 0.0 hypothetical protein
blastp_kegg lcl|cit:102620336 1 378 + 378 none 66.55 568 88.10 0.0 vacuolar protein sorting-associated protein 45 homolog
blastp_kegg lcl|csv:101228434 1 378 + 378 none 66.55 568 85.98 0.0 vacuolar protein sorting-associated protein 45 homolog
blastp_pdb 2xhe_A 1 342 + 342 Gaps:21 53.69 650 25.21 5e-25 mol:protein length:650 UNC18
blastp_pdb 1fvh_A 22 366 + 345 Gaps:29 58.54 591 26.01 2e-23 mol:protein length:591 SEC1
blastp_pdb 1fvf_B 22 366 + 345 Gaps:29 58.54 591 26.01 2e-23 mol:protein length:591 SEC1
blastp_pdb 1fvf_A 22 366 + 345 Gaps:29 58.54 591 26.01 2e-23 mol:protein length:591 SEC1
blastp_pdb 1epu_A 22 366 + 345 Gaps:29 58.54 591 26.01 2e-23 mol:protein length:591 S-SEC1
blastp_pdb 3puk_B 21 366 + 346 Gaps:26 57.77 592 24.27 7e-23 mol:protein length:592 Syntaxin-binding protein 3
blastp_pdb 3puk_A 21 366 + 346 Gaps:26 57.77 592 24.27 7e-23 mol:protein length:592 Syntaxin-binding protein 3
blastp_pdb 2pjx_B 21 366 + 346 Gaps:26 57.77 592 24.27 7e-23 mol:protein length:592 Syntaxin-binding protein 3
blastp_pdb 2pjx_A 21 366 + 346 Gaps:26 57.77 592 24.27 7e-23 mol:protein length:592 Syntaxin-binding protein 3
blastp_pdb 3puj_B 22 348 + 327 Gaps:17 55.22 594 23.17 2e-19 mol:protein length:594 Syntaxin-binding protein 1
blastp_uniprot_sprot sp|O49048|VPS45_ARATH 1 378 + 378 Gaps:1 66.61 569 82.85 0.0 Vacuolar protein sorting-associated protein 45 homolog OS Arabidopsis thaliana GN VPS45 PE 1 SV 2
blastp_uniprot_sprot sp|P97390|VPS45_MOUSE 1 378 + 378 Gaps:12 64.91 570 48.65 2e-121 Vacuolar protein sorting-associated protein 45 OS Mus musculus GN Vps45 PE 1 SV 1
blastp_uniprot_sprot sp|O08700|VPS45_RAT 1 378 + 378 Gaps:12 64.91 570 48.65 1e-120 Vacuolar protein sorting-associated protein 45 OS Rattus norvegicus GN Vps45 PE 1 SV 1
blastp_uniprot_sprot sp|Q54GE3|VPS45_DICDI 1 368 + 368 Gaps:17 63.41 563 49.30 8e-119 Vacuolar protein sorting-associated protein 45 OS Dictyostelium discoideum GN vps45 PE 1 SV 1
blastp_uniprot_sprot sp|Q9NRW7|VPS45_HUMAN 1 376 + 376 Gaps:12 64.56 570 48.37 4e-118 Vacuolar protein sorting-associated protein 45 OS Homo sapiens GN VPS45 PE 1 SV 1
blastp_uniprot_sprot sp|Q09805|VPS45_SCHPO 1 375 + 375 Gaps:10 65.77 558 41.14 4e-93 Vacuolar protein sorting-associated protein 45 OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN vps45 PE 3 SV 1
blastp_uniprot_sprot sp|P38932|VPS45_YEAST 21 375 + 355 Gaps:6 60.49 577 38.11 4e-87 Vacuolar protein sorting-associated protein 45 OS Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN VPS45 PE 1 SV 2
blastp_uniprot_sprot sp|Q54QC8|SEC1_DICDI 11 368 + 358 Gaps:24 60.54 598 27.35 6e-34 Protein transport protein sec1 OS Dictyostelium discoideum GN sec1 PE 3 SV 1
blastp_uniprot_sprot sp|Q9C5P7|SEC1A_ARATH 17 378 + 362 Gaps:38 55.27 673 27.42 1e-26 Protein transport Sec1a OS Arabidopsis thaliana GN SEC1A PE 2 SV 3
blastp_uniprot_sprot sp|Q9SZ77|SEC1B_ARATH 22 365 + 344 Gaps:36 54.98 662 26.37 4e-25 Protein transport Sec1b OS Arabidopsis thaliana GN SEC1B PE 2 SV 3

7 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 21 368 348 PF00995 none Sec1 family IPR001619
Gene3D 238 351 114 G3DSA:3.90.830.10 none none none
Gene3D 2 127 126 G3DSA:3.40.50.2060 none none none
Gene3D 130 237 108 G3DSA:3.40.50.1910 none none IPR027482
PANTHER 2 378 377 PTHR11679 none none IPR001619
PANTHER 2 378 377 PTHR11679:SF3 none none none
SUPERFAMILY 3 369 367 SSF56815 none none IPR001619

0 Localization

0 Qtllist

0 Targeting