Protein : Qrob_P0463780.2 Q. robur
Protein Identifier  ? Qrob_P0463780.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=1) PTHR11913:SF16 - ACTIN-DEPOLYMERIZING FACTOR 5-RELATED (PTHR11913:SF16) Gene Prediction Quality  validated
Protein length 

Sequence

Length: 144  
Kegg Orthology  K05765
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0005622 intracellular The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
GO:0015629 actin cytoskeleton The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes.
GO:0003779 actin binding Interacting selectively and non-covalently with monomeric or multimeric forms of actin, including actin filaments.
GO:0030042 actin filament depolymerization Disassembly of actin filaments by the removal of actin monomers from a filament.

41 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|vvi:100245314 1 143 + 143 none 100.00 143 95.80 1e-96 actin-depolymerizing factor 5-like
blastp_kegg lcl|pop:POPTR_0004s17950g 1 143 + 143 none 100.00 143 92.31 1e-95 POPTRDRAFT_713289 hypothetical protein
blastp_kegg lcl|tcc:TCM_006647 1 143 + 143 none 76.47 187 94.41 4e-95 Actin depolymerizing factor 5
blastp_kegg lcl|pop:POPTR_0009s13570g 1 143 + 143 none 100.00 143 90.91 7e-94 POPTRDRAFT_721752 putative actin-depolymerizing factor family protein
blastp_kegg lcl|cit:102609419 1 143 + 143 none 100.00 143 93.71 8e-94 actin-depolymerizing factor 5-like
blastp_kegg lcl|cam:101494606 1 143 + 143 none 80.34 178 92.31 1e-93 actin-depolymerizing factor 5-like
blastp_kegg lcl|pvu:PHAVU_011G034600g 1 143 + 143 none 100.00 143 93.01 1e-93 hypothetical protein
blastp_kegg lcl|cmo:103497322 1 143 + 143 none 100.00 143 91.61 3e-93 actin-depolymerizing factor 5-like
blastp_kegg lcl|csv:101223481 1 142 + 142 none 100.00 142 91.55 1e-92 actin-depolymerizing factor 5-like
blastp_kegg lcl|gmx:100526982 1 143 + 143 none 100.00 143 92.31 1e-92 uncharacterized LOC100526982
blastp_pdb 1f7s_A 8 142 + 135 none 97.12 139 59.26 2e-57 mol:protein length:139 ACTIN DEPOLYMERIZING FACTOR (ADF)
blastp_pdb 1cnu_A 10 143 + 134 Gaps:1 97.08 137 42.86 4e-38 mol:protein length:137 ACTOPHORIN
blastp_pdb 1ahq_A 10 143 + 134 Gaps:1 97.08 137 42.86 4e-38 mol:protein length:137 ACTOPHORIN
blastp_pdb 2i2q_A 7 142 + 136 Gaps:2 97.81 137 38.81 8e-30 mol:protein length:137 Cofilin
blastp_pdb 1qpv_A 7 141 + 135 Gaps:2 94.41 143 36.30 1e-28 mol:protein length:143 YEAST COFILIN
blastp_pdb 1cof_A 7 141 + 135 Gaps:2 94.41 143 36.30 1e-28 mol:protein length:143 COFILIN
blastp_pdb 1cfy_B 7 141 + 135 Gaps:2 94.41 143 36.30 1e-28 mol:protein length:143 COFILIN
blastp_pdb 1cfy_A 7 141 + 135 Gaps:2 94.41 143 36.30 1e-28 mol:protein length:143 COFILIN
blastp_pdb 1ak7_A 8 141 + 134 Gaps:19 86.78 174 29.14 2e-17 mol:protein length:174 DESTRIN
blastp_pdb 1ak6_A 8 141 + 134 Gaps:19 86.78 174 29.14 2e-17 mol:protein length:174 DESTRIN
blastp_uniprot_sprot sp|Q9ZNT3|ADF5_ARATH 1 143 + 143 none 100.00 143 83.92 4e-85 Actin-depolymerizing factor 5 OS Arabidopsis thaliana GN ADF5 PE 1 SV 1
blastp_uniprot_sprot sp|Q10P87|ADF5_ORYSJ 1 143 + 143 none 100.00 143 79.72 1e-82 Actin-depolymerizing factor 5 OS Oryza sativa subsp. japonica GN ADF5 PE 2 SV 1
blastp_uniprot_sprot sp|O49606|ADF9_ARATH 3 143 + 141 none 100.00 141 78.72 4e-81 Actin-depolymerizing factor 9 OS Arabidopsis thaliana GN ADF9 PE 2 SV 2
blastp_uniprot_sprot sp|Q8SAG3|ADF_VITVI 3 142 + 140 Gaps:2 99.30 143 66.20 1e-62 Actin-depolymerizing factor OS Vitis vinifera PE 2 SV 1
blastp_uniprot_sprot sp|Q9ZSK2|ADF6_ARATH 8 143 + 136 none 93.15 146 63.24 1e-60 Actin-depolymerizing factor 6 OS Arabidopsis thaliana GN ADF6 PE 1 SV 1
blastp_uniprot_sprot sp|Q9FVI2|ADF1_PETHY 8 142 + 135 none 97.12 139 60.00 2e-58 Actin-depolymerizing factor 1 OS Petunia hybrida GN ADF1 PE 2 SV 1
blastp_uniprot_sprot sp|Q6EUH7|ADF1_ORYSJ 8 142 + 135 none 97.12 139 60.74 2e-58 Actin-depolymerizing factor 1 OS Oryza sativa subsp. japonica GN ADF1 PE 2 SV 1
blastp_uniprot_sprot sp|Q2QLT8|ADF11_ORYSJ 8 142 + 135 none 93.10 145 58.52 3e-58 Actin-depolymerizing factor 11 OS Oryza sativa subsp. japonica GN ADF11 PE 2 SV 1
blastp_uniprot_sprot sp|Q570Y6|ADF8_ARATH 8 141 + 134 none 95.71 140 58.96 1e-57 Actin-depolymerizing factor 8 OS Arabidopsis thaliana GN ADF8 PE 2 SV 2
blastp_uniprot_sprot sp|Q7XSN9|ADF6_ORYSJ 8 142 + 135 none 97.12 139 59.26 2e-57 Actin-depolymerizing factor 6 OS Oryza sativa subsp. japonica GN ADF6 PE 2 SV 2

7 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
ProSiteProfiles 11 143 133 PS51263 none ADF-H domain profile. IPR002108
Gene3D 7 141 135 G3DSA:3.40.20.10 none none IPR029006
SUPERFAMILY 6 141 136 SSF55753 none none none
PANTHER 1 142 142 PTHR11913 none none IPR017904
SMART 16 143 128 SM00102 none Actin depolymerisation factor/cofilin -like domains IPR002108
Pfam 16 142 127 PF00241 none Cofilin/tropomyosin-type actin-binding protein IPR002108
PANTHER 1 142 142 PTHR11913:SF16 none none none

0 Localization

1 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpis_3P Qrob_Chr12 12 s_1AOES6_1466 s_1B0DDG_1094 28,97 28,55 30,1 lod 3.6 8.4

0 Targeting