Protein : Qrob_P0463720.2 Q. robur
Protein Identifier  ? Qrob_P0463720.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=1) PTHR11071:SF203 - PEPTIDYL-PROLYL CIS-TRANS ISOMERASE (PTHR11071:SF203) Code Enzyme  EC:5.2.1.8
Gene Prediction Quality  validated Protein length 

Sequence

Length: 254  
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0006457 protein folding The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure.
GO:0000413 protein peptidyl-prolyl isomerization The modification of a protein by cis-trans isomerization of a proline residue.
GO:0003755 peptidyl-prolyl cis-trans isomerase activity Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0).

50 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cam:101493976 1 252 + 252 Gaps:30 99.55 223 77.93 4e-111 peptidyl-prolyl cis-trans isomerase CYP19-4-like
blastp_kegg lcl|cit:102610001 1 253 + 253 Gaps:30 100.00 223 80.72 1e-109 peptidyl-prolyl cis-trans isomerase CYP19-4-like
blastp_kegg lcl|pop:POPTR_0009s13540g 6 253 + 248 Gaps:31 97.33 225 76.71 2e-109 POPTRDRAFT_821105 hypothetical protein
blastp_kegg lcl|rcu:RCOM_1132250 5 253 + 249 Gaps:30 100.00 219 81.28 8e-108 peptidyl-prolyl cis-trans isomerase putative (EC:5.2.1.8)
blastp_kegg lcl|pvu:PHAVU_011G034400g 1 252 + 252 Gaps:41 99.57 234 73.39 6e-107 hypothetical protein
blastp_kegg lcl|mdm:103409311 1 252 + 252 Gaps:31 99.55 224 74.44 6e-106 peptidyl-prolyl cis-trans isomerase CYP19-4-like
blastp_kegg lcl|csv:101216978 1 252 + 252 Gaps:30 99.55 223 77.03 3e-105 peptidyl-prolyl cis-trans isomerase CYP19-4-like
blastp_kegg lcl|gmx:100808240 1 253 + 253 Gaps:31 95.69 232 77.93 4e-105 peptidyl-prolyl cis-trans isomerase CYP19-4-like
blastp_kegg lcl|pxb:103942085 1 252 + 252 Gaps:31 99.55 224 77.58 9e-105 peptidyl-prolyl cis-trans isomerase CYP21-1
blastp_kegg lcl|mdm:103412498 1 252 + 252 Gaps:31 99.55 224 73.99 9e-105 peptidyl-prolyl cis-trans isomerase CYP19-4
blastp_pdb 2igw_A 47 244 + 198 Gaps:31 96.53 173 56.89 3e-53 mol:protein length:173 Peptidyl-prolyl cis-trans isomerase 3
blastp_pdb 2igv_A 47 244 + 198 Gaps:31 96.53 173 56.89 3e-53 mol:protein length:173 Peptidyl-prolyl cis-trans isomerase 3
blastp_pdb 1e8k_A 47 244 + 198 Gaps:31 96.53 173 56.89 3e-53 mol:protein length:173 PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 3
blastp_pdb 1e3b_A 47 244 + 198 Gaps:31 96.53 173 56.89 3e-53 mol:protein length:173 CYCLOPHILIN 3
blastp_pdb 1dyw_A 47 244 + 198 Gaps:31 96.53 173 56.89 3e-53 mol:protein length:173 CYCLOPHILIN 3
blastp_pdb 2esl_F 42 244 + 203 Gaps:37 87.37 190 60.24 6e-51 mol:protein length:190 PEPTIDYL-PROLYL CIS-TRANS ISOMERASE C
blastp_pdb 2esl_E 42 244 + 203 Gaps:37 87.37 190 60.24 6e-51 mol:protein length:190 PEPTIDYL-PROLYL CIS-TRANS ISOMERASE C
blastp_pdb 2esl_D 42 244 + 203 Gaps:37 87.37 190 60.24 6e-51 mol:protein length:190 PEPTIDYL-PROLYL CIS-TRANS ISOMERASE C
blastp_pdb 2esl_C 42 244 + 203 Gaps:37 87.37 190 60.24 6e-51 mol:protein length:190 PEPTIDYL-PROLYL CIS-TRANS ISOMERASE C
blastp_pdb 2esl_B 42 244 + 203 Gaps:37 87.37 190 60.24 6e-51 mol:protein length:190 PEPTIDYL-PROLYL CIS-TRANS ISOMERASE C
blastp_uniprot_sprot sp|Q8LDP4|CP19D_ARATH 8 245 + 238 Gaps:38 99.50 201 58.50 5e-66 Peptidyl-prolyl cis-trans isomerase CYP19-4 OS Arabidopsis thaliana GN CYP19-4 PE 1 SV 2
blastp_uniprot_sprot sp|Q9SP02|CP20A_ARATH 33 245 + 213 Gaps:31 89.22 204 58.79 3e-63 Peptidyl-prolyl cis-trans isomerase CYP20-1 OS Arabidopsis thaliana GN CYP20-1 PE 1 SV 1
blastp_uniprot_sprot sp|Q9TW32|PPIB_DICDI 16 244 + 229 Gaps:35 98.48 197 55.67 9e-59 Peptidyl-prolyl cis-trans isomerase B OS Dictyostelium discoideum GN cypB PE 1 SV 1
blastp_uniprot_sprot sp|Q01490|PPIB_ORPSP 14 253 + 240 Gaps:48 94.58 203 55.73 2e-55 Peptidyl-prolyl cis-trans isomerase B OS Orpinomyces sp. (strain PC-2) GN CYPB PE 1 SV 1
blastp_uniprot_sprot sp|Q6C4W6|PPIB_YARLI 19 245 + 227 Gaps:41 81.58 228 55.91 3e-54 Peptidyl-prolyl cis-trans isomerase B OS Yarrowia lipolytica (strain CLIB 122 / E 150) GN CPR2 PE 3 SV 1
blastp_uniprot_sprot sp|P52015|CYP7_CAEEL 47 244 + 198 Gaps:31 97.66 171 55.69 1e-52 Peptidyl-prolyl cis-trans isomerase 7 OS Caenorhabditis elegans GN cyn-7 PE 1 SV 2
blastp_uniprot_sprot sp|P52011|CYP3_CAEEL 47 244 + 198 Gaps:31 96.53 173 56.89 1e-52 Peptidyl-prolyl cis-trans isomerase 3 OS Caenorhabditis elegans GN cyn-3 PE 1 SV 1
blastp_uniprot_sprot sp|P24369|PPIB_MOUSE 3 244 + 242 Gaps:43 92.13 216 52.76 8e-52 Peptidyl-prolyl cis-trans isomerase B OS Mus musculus GN Ppib PE 2 SV 2
blastp_uniprot_sprot sp|P24367|PPIB_CHICK 42 244 + 203 Gaps:37 80.19 207 57.83 2e-51 Peptidyl-prolyl cis-trans isomerase B OS Gallus gallus GN PPIB PE 2 SV 1
blastp_uniprot_sprot sp|P80311|PPIB_BOVIN 13 244 + 232 Gaps:39 89.35 216 53.37 2e-51 Peptidyl-prolyl cis-trans isomerase B OS Bos taurus GN PPIB PE 1 SV 4

17 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Gene3D 43 243 201 G3DSA:2.40.100.10 none none IPR029000
ProSitePatterns 126 143 18 PS00170 none Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. IPR020892
SUPERFAMILY 121 244 124 SSF50891 none none IPR029000
SUPERFAMILY 43 84 42 SSF50891 none none IPR029000
PANTHER 1 76 76 PTHR11071:SF203 none none none
PANTHER 106 245 140 PTHR11071:SF203 none none none
Pfam 52 242 191 PF00160 none Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD IPR002130
Phobius 30 253 224 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
PRINTS 66 81 16 PR00153 none Cyclophilin peptidyl-prolyl cis-trans isomerase signature IPR002130
PRINTS 175 190 16 PR00153 none Cyclophilin peptidyl-prolyl cis-trans isomerase signature IPR002130
PRINTS 203 218 16 PR00153 none Cyclophilin peptidyl-prolyl cis-trans isomerase signature IPR002130
PRINTS 190 202 13 PR00153 none Cyclophilin peptidyl-prolyl cis-trans isomerase signature IPR002130
ProSiteProfiles 49 243 195 PS50072 none Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. IPR002130
Phobius 1 11 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
PANTHER 1 76 76 PTHR11071 none none IPR024936
PANTHER 106 245 140 PTHR11071 none none IPR024936
Phobius 12 29 18 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none

2 Localization

Analysis Start End Length
TMHMM 13 30 17
TMHMM 74 91 17

1 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpis_3P Qrob_Chr12 12 s_1AOES6_1466 s_1B0DDG_1094 28,97 28,55 30,1 lod 3.6 8.4

0 Targeting