Protein : Qrob_P0462220.2 Q. robur
Protein Identifier  ? Qrob_P0462220.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=35) PF14368 - Probable lipid transfer Gene Prediction Quality  validated
Protein length 

Sequence

Length: 164  
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0008289 lipid binding Interacting selectively and non-covalently with a lipid.
GO:0006869 lipid transport The directed movement of lipids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent.

24 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|gmx:100306151 2 163 + 162 Gaps:7 90.86 186 60.36 9e-61 uncharacterized LOC100306151
blastp_kegg lcl|tcc:TCM_004321 1 162 + 162 Gaps:8 90.91 187 62.35 7e-58 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
blastp_kegg lcl|rcu:RCOM_0646530 1 163 + 163 Gaps:28 92.27 207 56.02 9e-57 Nonspecific lipid-transfer protein precursor putative
blastp_kegg lcl|mdm:103448982 1 163 + 163 Gaps:17 91.75 194 61.80 9e-54 non-specific lipid-transfer protein-like protein At2g13820
blastp_kegg lcl|fve:101306497 1 163 + 163 Gaps:10 91.53 189 62.43 5e-53 non-specific lipid-transfer protein-like protein At2g13820-like
blastp_kegg lcl|pmum:103334223 1 163 + 163 Gaps:11 91.58 190 64.37 5e-52 non-specific lipid-transfer protein-like protein At2g13820
blastp_kegg lcl|pvu:PHAVU_007G173500g 2 163 + 162 Gaps:9 90.86 186 62.72 2e-51 hypothetical protein
blastp_kegg lcl|vvi:100852418 2 161 + 160 Gaps:16 88.34 163 62.50 7e-50 non-specific lipid-transfer protein-like protein At2g13820-like
blastp_kegg lcl|pxb:103957215 1 163 + 163 Gaps:35 92.45 212 53.57 9e-50 non-specific lipid-transfer protein-like protein At2g13820
blastp_kegg lcl|fve:101302415 1 163 + 163 Gaps:16 91.79 195 59.78 2e-49 non-specific lipid-transfer protein-like protein At2g13820-like
blastp_uniprot_sprot sp|Q9ZQI8|NLTL2_ARATH 2 153 + 152 Gaps:19 89.35 169 35.10 1e-17 Non-specific lipid-transfer protein-like protein At2g13820 OS Arabidopsis thaliana GN At2g13820 PE 1 SV 1
blastp_uniprot_sprot sp|O64864|YLS3_ARATH 7 154 + 148 Gaps:28 84.88 205 31.61 8e-13 Protein YLS3 OS Arabidopsis thaliana GN YLS3 PE 2 SV 1
blastp_uniprot_sprot sp|Q8VYI9|NLTL5_ARATH 12 89 + 78 Gaps:3 43.41 182 37.97 2e-11 Non-specific lipid-transfer protein-like protein At5g64080 OS Arabidopsis thaliana GN At5g64080 PE 1 SV 1
blastp_uniprot_sprot sp|Q9C7F7|UGPI5_ARATH 12 162 + 151 Gaps:8 81.35 193 24.20 1e-10 Uncharacterized GPI-anchored protein At1g27950 OS Arabidopsis thaliana GN At1g27950 PE 1 SV 1
blastp_uniprot_sprot sp|Q9ZVC7|XYP11_ARATH 12 89 + 78 Gaps:3 46.02 176 34.57 8e-09 Xylogen-like protein 11 OS Arabidopsis thaliana GN XYP11 PE 1 SV 2
blastp_uniprot_sprot sp|Q9FFY3|VAS_ARATH 4 87 + 84 Gaps:7 56.29 151 36.47 1e-08 Lipid transfer-like protein VAS OS Arabidopsis thaliana GN VAS PE 2 SV 1
blastp_uniprot_sprot sp|Q6ASY2|NLTL1_ORYSJ 12 98 + 87 Gaps:7 50.56 178 38.89 8e-08 Non-specific lipid transfer protein-like 1 OS Oryza sativa subsp. japonica GN LTPL1 PE 1 SV 1
blastp_uniprot_sprot sp|Q42641|NLTPA_BRAOT 12 87 + 76 Gaps:5 68.64 118 39.51 2e-06 Non-specific lipid-transfer protein A OS Brassica oleracea var. italica GN WAX9A PE 3 SV 1
blastp_uniprot_sprot sp|Q41073|NLTP_PINTA 12 81 + 70 Gaps:7 59.35 123 35.62 5e-06 Non-specific lipid-transfer protein OS Pinus taeda PE 2 SV 1
rpsblast_cdd gnl|CDD|72935 19 81 + 63 none 100.00 63 58.73 3e-14 cd00010 AAI_LTSS AAI_LTSS: Alpha-Amylase Inhibitors (AAI) Lipid Transfer (LT) and Seed Storage (SS) Protein family a protein family unique to higher plants that includes cereal-type alpha-amylase inhibitors lipid transfer proteins seed storage proteins and similar proteins. Proteins in this family are known to play important roles in defending plants from insects and pathogens lipid transport between intracellular membranes and nutrient storage. Many proteins of this family have been identified as allergens in humans. These proteins contain a common pattern of eight cysteines that form four disulfide bridges..
rpsblast_cdd gnl|CDD|201103 12 89 + 78 Gaps:6 100.00 74 47.30 1e-11 pfam00234 Tryp_alpha_amyl Protease inhibitor/seed storage/LTP family. This family is composed of trypsin-alpha amylase inhibitors seed storage proteins and lipid transfer proteins from plants.
rpsblast_cdd gnl|CDD|206536 3 89 + 87 Gaps:3 90.53 95 38.37 3e-10 pfam14368 LTP_2 Probable lipid transfer. The members of this family are probably involved in lipid transfer. The family has several highly conserved cysteines paired in various ways.
rpsblast_cdd gnl|CDD|197763 12 89 + 78 Gaps:7 100.00 79 43.04 1e-08 smart00499 AAI Plant lipid transfer protein / seed storage protein / trypsin-alpha amylase inhibitor domain family.
rpsblast_cdd gnl|CDD|72939 12 87 + 76 Gaps:7 91.01 89 38.27 4e-07 cd01960 nsLTP1 nsLTP1: Non-specific lipid-transfer protein type 1 (nsLTP1) subfamily Plant nsLTPs are small soluble proteins that facilitate the transfer of fatty acids phospholipids glycolipids and steroids between membranes. In addition to lipid transport and assembly nsLTPs also play a key role in the defense of plants against pathogens. There are two closely-related types of nsLTPs types 1 and 2 which differ in protein sequence molecular weight and biological properties. nsLTPs contain an internal hydrophobic cavity which serves as the binding site for lipids. The hydrophobic cavity accommodates various fatty acid ligands containing from ten to 18 carbon atoms. In general the cavity is larger in nsLTP1 than in nsLTP2. nsLTP1 proteins are located in extracellular layers and in vacuolar structures. They may be involved in the formation of cutin layers on plant surfaces by transporting cutin monomers. Many nsLTP1 proteins have been characterized as allergens in humans..

10 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PRINTS 32 46 15 PR00382 none Plant phospholipid transfer protein signature IPR000528
PRINTS 66 83 18 PR00382 none Plant phospholipid transfer protein signature IPR000528
PRINTS 11 27 17 PR00382 none Plant phospholipid transfer protein signature IPR000528
Pfam 6 89 84 PF14368 none Probable lipid transfer IPR016140
Phobius 1 143 143 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
SMART 12 89 78 SM00499 none Plant lipid transfer protein / seed storage protein / trypsin-alpha amylase inhibitor domain family IPR016140
Phobius 144 162 19 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 163 163 1 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Gene3D 11 90 80 G3DSA:1.10.110.10 none none none
SUPERFAMILY 11 89 79 SSF47699 none none IPR016140

0 Localization

4 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2015_nP_3P Qrob_Chr12 12 v_10140_295 v_838_303 16 14,69 18,01 lod 5.1 13.7
Bourran2_2015_nSecLBD_3P Qrob_Chr12 12 s_A4YYC_633 s_2F1IZB_703 18,64 18,01 21,53 lod 6.5 17.2
Bourran2_2014_nSeqBC_3P Qrob_Chr12 12 s_1EO8V5_710 s_1A2VMU_355 11,04 0 32,58 lod 1,7196 4,7

0 Targeting