Protein : Qrob_P0462210.2 Q. robur
Protein Identifier  ? Qrob_P0462210.2 Organism . Name  Quercus robur
Score  86.1 Score Type  egn
Protein Description  (M=35) PF14368 - Probable lipid transfer Gene Prediction Quality  validated
Protein length 

Sequence

Length: 132  
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0008289 lipid binding Interacting selectively and non-covalently with a lipid.
GO:0006869 lipid transport The directed movement of lipids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent.

23 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|vvi:100852418 1 129 + 129 Gaps:2 77.91 163 69.29 4e-52 non-specific lipid-transfer protein-like protein At2g13820-like
blastp_kegg lcl|pop:POPTR_0008s15490g 1 129 + 129 Gaps:2 84.11 151 70.08 6e-51 protease inhibitor/seed storage/lipid transfer family protein
blastp_kegg lcl|rcu:RCOM_0646570 1 109 + 109 Gaps:1 64.71 170 75.45 2e-50 lipid binding protein putative
blastp_kegg lcl|pop:POPTR_0010s09550g 1 124 + 124 Gaps:2 71.76 170 70.49 8e-49 POPTRDRAFT_231139 hypothetical protein
blastp_kegg lcl|pmum:103324029 4 125 + 122 Gaps:2 72.73 165 70.00 2e-48 non-specific lipid-transfer protein-like protein At2g13820
blastp_kegg lcl|fve:101296088 4 125 + 122 Gaps:2 71.86 167 70.00 2e-47 non-specific lipid-transfer protein-like protein At2g13820-like
blastp_kegg lcl|vvi:100252788 1 110 + 110 Gaps:2 63.16 171 74.07 1e-46 non-specific lipid-transfer protein-like protein At2g13820-like
blastp_kegg lcl|gmx:100500289 1 108 + 108 none 63.53 170 71.30 2e-46 uncharacterized LOC100500289
blastp_kegg lcl|pper:PRUPE_ppa012613mg 6 125 + 120 Gaps:2 73.29 161 69.49 2e-46 hypothetical protein
blastp_kegg lcl|tcc:TCM_020655 1 108 + 108 Gaps:2 61.63 172 73.58 2e-46 Non-specific lipid-transfer protein isoform 2
blastp_uniprot_sprot sp|Q9ZQI8|NLTL2_ARATH 9 108 + 100 Gaps:5 59.76 169 36.63 7e-15 Non-specific lipid-transfer protein-like protein At2g13820 OS Arabidopsis thaliana GN At2g13820 PE 1 SV 1
blastp_uniprot_sprot sp|Q8VYI9|NLTL5_ARATH 26 108 + 83 Gaps:3 46.15 182 36.90 3e-13 Non-specific lipid-transfer protein-like protein At5g64080 OS Arabidopsis thaliana GN At5g64080 PE 1 SV 1
blastp_uniprot_sprot sp|Q9FFY3|VAS_ARATH 1 105 + 105 Gaps:10 68.21 151 38.83 3e-11 Lipid transfer-like protein VAS OS Arabidopsis thaliana GN VAS PE 2 SV 1
blastp_uniprot_sprot sp|O64864|YLS3_ARATH 4 107 + 104 Gaps:5 52.20 205 30.84 1e-10 Protein YLS3 OS Arabidopsis thaliana GN YLS3 PE 2 SV 1
blastp_uniprot_sprot sp|Q9ZVC7|XYP11_ARATH 28 108 + 81 Gaps:6 49.43 176 35.63 5e-08 Xylogen-like protein 11 OS Arabidopsis thaliana GN XYP11 PE 1 SV 2
blastp_uniprot_sprot sp|Q41073|NLTP_PINTA 1 99 + 99 Gaps:11 86.18 123 34.91 1e-07 Non-specific lipid-transfer protein OS Pinus taeda PE 2 SV 1
blastp_uniprot_sprot sp|A0AT30|NLTP3_LENCU 6 102 + 97 Gaps:12 80.51 118 33.68 3e-07 Non-specific lipid-transfer protein 3 OS Lens culinaris PE 3 SV 1
blastp_uniprot_sprot sp|Q42641|NLTPA_BRAOT 8 105 + 98 Gaps:10 84.75 118 39.00 2e-06 Non-specific lipid-transfer protein A OS Brassica oleracea var. italica GN WAX9A PE 3 SV 1
blastp_uniprot_sprot sp|Q9C7F7|UGPI5_ARATH 40 107 + 68 Gaps:4 37.31 193 29.17 4e-06 Uncharacterized GPI-anchored protein At1g27950 OS Arabidopsis thaliana GN At1g27950 PE 1 SV 1
blastp_uniprot_sprot sp|Q43119|NLTPD_RICCO 30 100 + 71 Gaps:7 63.79 116 37.84 7e-06 Non-specific lipid-transfer protein D cotyledon-specific isoform OS Ricinus communis PE 3 SV 1
rpsblast_cdd gnl|CDD|72935 37 99 + 63 none 100.00 63 49.21 4e-14 cd00010 AAI_LTSS AAI_LTSS: Alpha-Amylase Inhibitors (AAI) Lipid Transfer (LT) and Seed Storage (SS) Protein family a protein family unique to higher plants that includes cereal-type alpha-amylase inhibitors lipid transfer proteins seed storage proteins and similar proteins. Proteins in this family are known to play important roles in defending plants from insects and pathogens lipid transport between intracellular membranes and nutrient storage. Many proteins of this family have been identified as allergens in humans. These proteins contain a common pattern of eight cysteines that form four disulfide bridges..
rpsblast_cdd gnl|CDD|206536 9 107 + 99 Gaps:6 100.00 95 36.84 4e-13 pfam14368 LTP_2 Probable lipid transfer. The members of this family are probably involved in lipid transfer. The family has several highly conserved cysteines paired in various ways.
rpsblast_cdd gnl|CDD|201103 30 107 + 78 Gaps:4 100.00 74 32.43 2e-08 pfam00234 Tryp_alpha_amyl Protease inhibitor/seed storage/LTP family. This family is composed of trypsin-alpha amylase inhibitors seed storage proteins and lipid transfer proteins from plants.

12 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SMART 30 107 78 SM00499 none Plant lipid transfer protein / seed storage protein / trypsin-alpha amylase inhibitor domain family IPR016140
PRINTS 29 45 17 PR00382 none Plant phospholipid transfer protein signature IPR000528
PRINTS 84 101 18 PR00382 none Plant phospholipid transfer protein signature IPR000528
PRINTS 50 64 15 PR00382 none Plant phospholipid transfer protein signature IPR000528
Phobius 20 24 5 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
Phobius 25 131 107 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 1 24 24 SIGNAL_PEPTIDE none Signal peptide region none
Gene3D 29 110 82 G3DSA:1.10.110.10 none none none
Phobius 1 7 7 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
Phobius 8 19 12 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
Pfam 9 107 99 PF14368 none Probable lipid transfer IPR016140
SUPERFAMILY 29 109 81 SSF47699 none none IPR016140

3 Localization

Analysis Start End Length
SignalP_GRAM_POSITIVE 1 29 28
SignalP_EUK 1 24 23
SignalP_GRAM_NEGATIVE 1 24 23

4 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2015_nP_3P Qrob_Chr12 12 v_10140_295 v_838_303 16 14,69 18,01 lod 5.1 13.7
Bourran2_2015_nSecLBD_3P Qrob_Chr12 12 s_A4YYC_633 s_2F1IZB_703 18,64 18,01 21,53 lod 6.5 17.2
Bourran2_2014_nSeqBC_3P Qrob_Chr12 12 s_1EO8V5_710 s_1A2VMU_355 11,04 0 32,58 lod 1,7196 4,7

0 Targeting