Protein : Qrob_P0461220.2 Q. robur
Protein Identifier  ? Qrob_P0461220.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=82) PF00190 - Cupin Gene Prediction Quality  validated
Protein length 

Sequence

Length: 220  
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0045735 nutrient reservoir activity Functions in the storage of nutritious substrates.
GO:0030145 manganese ion binding Interacting selectively and non-covalently with manganese (Mn) ions.

27 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pper:PRUPE_ppa016616mg 1 219 + 219 Gaps:4 97.36 227 75.57 1e-107 hypothetical protein
blastp_kegg lcl|sot:102586196 7 219 + 213 Gaps:6 95.18 228 73.73 2e-107 germin-like protein subfamily 1 member 20-like
blastp_kegg lcl|pper:PRUPE_ppa016284mg 1 219 + 219 Gaps:4 97.79 226 76.02 5e-107 hypothetical protein
blastp_kegg lcl|vvi:100240807 2 219 + 218 Gaps:2 99.09 220 72.94 7e-107 germin-like protein subfamily 1 member 7
blastp_kegg lcl|sot:102584547 7 219 + 213 Gaps:6 95.18 228 73.27 7e-107 germin-like protein subfamily 1 member 20-like
blastp_kegg lcl|pmum:103338888 1 219 + 219 Gaps:4 97.36 227 75.11 9e-107 germin-like protein subfamily 1 member 20
blastp_kegg lcl|tcc:TCM_026105 1 219 + 219 Gaps:4 100.00 221 73.30 9e-107 RmlC-like cupins superfamily protein
blastp_kegg lcl|vvi:100258041 2 219 + 218 Gaps:2 98.64 221 72.02 1e-106 germin-like protein subfamily 1 member 17
blastp_kegg lcl|rcu:RCOM_0338900 1 219 + 219 Gaps:1 97.76 223 72.48 3e-106 Rhicadhesin receptor precursor putative (EC:1.2.3.4)
blastp_kegg lcl|sly:101253729 7 219 + 213 Gaps:6 95.18 228 72.35 4e-106 germin-like protein subfamily 1 member 14-like
blastp_pdb 2et7_A 24 219 + 196 Gaps:6 97.51 201 48.47 4e-55 mol:protein length:201 Oxalate oxidase 1
blastp_pdb 2et1_A 24 219 + 196 Gaps:6 97.51 201 47.96 5e-54 mol:protein length:201 Oxalate oxidase 1
blastp_pdb 1fi2_A 24 219 + 196 Gaps:6 97.51 201 47.96 5e-54 mol:protein length:201 OXALATE OXIDASE
blastp_pdb 2ete_B 24 219 + 196 Gaps:6 97.51 201 47.96 5e-54 mol:protein length:201 Oxalate oxidase 1
blastp_pdb 2ete_A 24 219 + 196 Gaps:6 97.51 201 47.96 5e-54 mol:protein length:201 Oxalate oxidase 1
blastp_uniprot_sprot sp|Q9SFF9|GL17_ARATH 7 219 + 213 Gaps:5 93.45 229 69.63 2e-95 Germin-like protein subfamily 1 member 7 OS Arabidopsis thaliana GN At3g05950 PE 2 SV 1
blastp_uniprot_sprot sp|Q9FIC8|GL116_ARATH 1 219 + 219 Gaps:4 98.65 222 64.38 9e-95 Germin-like protein subfamily 1 member 16 OS Arabidopsis thaliana GN At5g39130 PE 2 SV 1
blastp_uniprot_sprot sp|P92997|GL113_ARATH 1 219 + 219 Gaps:3 99.10 222 63.18 2e-94 Germin-like protein subfamily 1 member 13 OS Arabidopsis thaliana GN GLP6 PE 2 SV 2
blastp_uniprot_sprot sp|P92996|GL120_ARATH 1 219 + 219 Gaps:4 98.65 222 64.38 4e-94 Germin-like protein subfamily 1 member 20 OS Arabidopsis thaliana GN GLP5A PE 1 SV 1
blastp_uniprot_sprot sp|P92999|GL118_ARATH 1 219 + 219 Gaps:4 98.65 222 64.38 5e-94 Germin-like protein subfamily 1 member 18 OS Arabidopsis thaliana GN GLP2A PE 2 SV 2
blastp_uniprot_sprot sp|Q9FID0|GL114_ARATH 1 219 + 219 Gaps:3 99.10 222 64.09 7e-94 Germin-like protein subfamily 1 member 14 OS Arabidopsis thaliana GN At5g39110 PE 3 SV 1
blastp_uniprot_sprot sp|Q9FIC6|GL117_ARATH 1 219 + 219 Gaps:4 99.10 221 65.75 3e-93 Germin-like protein subfamily 1 member 17 OS Arabidopsis thaliana GN At5g39150 PE 2 SV 1
blastp_uniprot_sprot sp|Q9FIC9|GL115_ARATH 1 219 + 219 Gaps:4 99.10 221 65.75 3e-93 Germin-like protein subfamily 1 member 15 OS Arabidopsis thaliana GN At5g39120 PE 2 SV 1
blastp_uniprot_sprot sp|Q9FL89|GL119_ARATH 1 219 + 219 Gaps:4 99.10 221 65.75 5e-93 Germin-like protein subfamily 1 member 19 OS Arabidopsis thaliana GN At5g39180 PE 2 SV 1
blastp_uniprot_sprot sp|Q6K5Q0|GL21_ORYSJ 10 219 + 210 Gaps:4 96.30 216 65.87 4e-91 Putative germin-like protein 2-1 OS Oryza sativa subsp. japonica GN Os02g0491600 PE 3 SV 1
rpsblast_cdd gnl|CDD|197904 68 213 + 146 Gaps:2 98.63 146 37.50 5e-29 smart00835 Cupin_1 Cupin. This family represents the conserved barrel domain of the 'cupin' superfamily ('cupa' is the Latin term for a small barrel). This family contains 11S and 7S plant seed storage proteins and germins. Plant seed storage proteins provide the major nitrogen source for the developing plant.
rpsblast_cdd gnl|CDD|201069 64 213 + 150 Gaps:16 99.28 139 36.96 2e-26 pfam00190 Cupin_1 Cupin. This family represents the conserved barrel domain of the 'cupin' superfamily ('cupa' is the Latin term for a small barrel). This family contains 11S and 7S plant seed storage proteins and germins. Plant seed storage proteins provide the major nitrogen source for the developing plant.

15 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PRINTS 112 132 21 PR00325 none Germin signature IPR001929
PRINTS 176 191 16 PR00325 none Germin signature IPR001929
PRINTS 143 163 21 PR00325 none Germin signature IPR001929
SMART 71 213 143 SM00835 none Cupin IPR006045
Phobius 1 22 22 SIGNAL_PEPTIDE none Signal peptide region none
PANTHER 7 219 213 PTHR31238:SF1 none none none
Pfam 74 211 138 PF00190 none Cupin IPR006045
Phobius 1 6 6 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
Phobius 23 219 197 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Gene3D 24 219 196 G3DSA:2.60.120.10 none none IPR014710
Phobius 18 22 5 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
Phobius 7 17 11 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
ProSitePatterns 107 120 14 PS00725 none Germin family signature. IPR019780
PANTHER 7 219 213 PTHR31238 none none none
SUPERFAMILY 24 219 196 SSF51182 none none IPR011051

3 Localization

Analysis Start End Length
SignalP_GRAM_POSITIVE 1 22 21
SignalP_GRAM_NEGATIVE 1 22 21
SignalP_EUK 1 22 21

2 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD_3P Qrob_Chr03 3 s_1ET7H8_604 s_1BYNB5_834 23,73 0 46,72 lod 1,7573 3,8
PM_1999_QTL14_peak_Bud_burst_3P Qrob_Chr03 3 s_2F0SI1_756 v_6056_735 11,78 3,78 50,78 lod 2,5 4,5

0 Targeting