Protein : Qrob_P0460870.2 Q. robur
Protein Identifier  ? Qrob_P0460870.2 Organism . Name  Quercus robur
Protein Description  (M=3) PTHR10438:SF255 - THIOREDOXIN M4, CHLOROPLASTIC (PTHR10438:SF255) Alias (in v1)  Qrob_P0641880.1
Code Enzyme  EC:1.8.1.8 Gene Prediction Quality  manual_v1
Protein length 

Sequence

Length: 187  
Kegg Orthology  K03671
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0015035 protein disulfide oxidoreductase activity Catalysis of the reaction: a protein with reduced sulfide groups = a protein with oxidized disulfide bonds.
GO:0045454 cell redox homeostasis Any process that maintains the redox environment of a cell or compartment within a cell.
GO:0006662 glycerol ether metabolic process The chemical reactions and pathways involving glycerol ethers, any anhydride formed between two organic hydroxy compounds, one of which is glycerol.

50 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pper:PRUPE_ppa012199mg 1 185 + 185 Gaps:6 99.44 180 79.89 1e-96 hypothetical protein
blastp_kegg lcl|fve:101292654 1 185 + 185 Gaps:4 99.45 182 81.22 2e-95 thioredoxin M-type chloroplastic-like
blastp_kegg lcl|pmum:103336439 1 185 + 185 Gaps:6 75.85 236 79.89 2e-95 thioredoxin M-type chloroplastic-like
blastp_kegg lcl|vvi:100264263 1 185 + 185 Gaps:3 99.45 183 76.37 5e-93 thioredoxin M-type chloroplastic-like
blastp_kegg lcl|mdm:103444549 1 185 + 185 Gaps:6 99.44 180 78.77 2e-88 thioredoxin M-type chloroplastic-like
blastp_kegg lcl|tcc:TCM_035372 1 186 + 186 Gaps:1 100.00 185 69.73 5e-86 Thioredoxin M-type 4
blastp_kegg lcl|gmx:100305596 1 186 + 186 Gaps:13 100.00 181 74.03 2e-85 uncharacterized LOC100305596
blastp_kegg lcl|cit:102612554 1 185 + 185 Gaps:3 100.00 182 70.33 5e-85 thioredoxin M-type chloroplastic-like
blastp_kegg lcl|pxb:103966287 1 185 + 185 Gaps:6 99.45 182 76.24 1e-84 thioredoxin M-type chloroplastic-like
blastp_kegg lcl|pxb:103942095 1 185 + 185 Gaps:6 99.44 180 77.09 8e-84 thioredoxin M-type chloroplastic-like
blastp_pdb 1fb6_B 80 184 + 105 none 100.00 105 72.38 5e-53 mol:protein length:105 THIOREDOXIN M
blastp_pdb 1fb6_A 80 184 + 105 none 100.00 105 72.38 5e-53 mol:protein length:105 THIOREDOXIN M
blastp_pdb 1fb0_B 80 184 + 105 none 100.00 105 72.38 5e-53 mol:protein length:105 THIOREDOXIN M
blastp_pdb 1fb0_A 80 184 + 105 none 100.00 105 72.38 5e-53 mol:protein length:105 THIOREDOXIN M
blastp_pdb 2puk_G 80 184 + 105 none 99.06 106 71.43 2e-52 mol:protein length:106 Thioredoxin M-type chloroplast (TRX-M)
blastp_pdb 2puk_C 80 184 + 105 none 99.06 106 71.43 2e-52 mol:protein length:106 Thioredoxin M-type chloroplast (TRX-M)
blastp_pdb 1gl8_A 81 184 + 104 none 100.00 104 72.12 3e-52 mol:protein length:104 THIOREDOXIN
blastp_pdb 1dby_A 80 184 + 105 none 98.13 107 60.00 1e-43 mol:protein length:107 CHLOROPLAST THIOREDOXIN M CH2
blastp_pdb 2fch_G 79 181 + 103 none 95.37 108 46.60 2e-31 mol:protein length:108 Thioredoxin 1
blastp_pdb 2fch_F 79 181 + 103 none 95.37 108 46.60 2e-31 mol:protein length:108 Thioredoxin 1
blastp_uniprot_sprot sp|P07591|TRXM_SPIOL 1 184 + 184 Gaps:7 98.90 181 60.89 5e-67 Thioredoxin M-type chloroplastic OS Spinacia oleracea PE 1 SV 2
blastp_uniprot_sprot sp|Q41864|TRXM_MAIZE 1 184 + 184 Gaps:22 98.20 167 61.59 5e-63 Thioredoxin M-type chloroplastic OS Zea mays GN TRM1 PE 2 SV 1
blastp_uniprot_sprot sp|P48384|TRXM_PEA 70 184 + 115 none 66.86 172 77.39 7e-63 Thioredoxin M-type chloroplastic OS Pisum sativum PE 2 SV 1
blastp_uniprot_sprot sp|Q9ZP21|TRXM_WHEAT 1 184 + 184 Gaps:13 98.86 175 58.96 2e-59 Thioredoxin M-type chloroplastic OS Triticum aestivum PE 2 SV 1
blastp_uniprot_sprot sp|Q9ZP20|TRXM5_ORYSJ 1 186 + 186 Gaps:18 100.00 172 59.30 1e-55 Thioredoxin M5 chloroplastic OS Oryza sativa subsp. japonica GN TRXM PE 2 SV 1
blastp_uniprot_sprot sp|Q6H7E4|TRXM1_ORYSJ 62 184 + 123 Gaps:2 72.25 173 60.80 4e-48 Thioredoxin M1 chloroplastic OS Oryza sativa subsp. japonica GN Os02g0639900 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SEU8|TRXM2_ARATH 43 184 + 142 none 76.34 186 47.18 2e-47 Thioredoxin M2 chloroplastic OS Arabidopsis thaliana GN At4g03520 PE 2 SV 2
blastp_uniprot_sprot sp|Q9XGS0|TRXM_BRANA 43 185 + 143 Gaps:3 79.10 177 47.86 1e-46 Thioredoxin M-type chloroplastic OS Brassica napus PE 1 SV 1
blastp_uniprot_sprot sp|Q7X8R5|TRXM2_ORYSJ 69 185 + 117 Gaps:2 66.11 180 60.50 1e-46 Thioredoxin M2 chloroplastic OS Oryza sativa subsp. japonica GN Os04g0530600 PE 2 SV 2
blastp_uniprot_sprot sp|Q9SEU6|TRXM4_ARATH 66 184 + 119 Gaps:3 63.21 193 54.92 4e-45 Thioredoxin M4 chloroplastic OS Arabidopsis thaliana GN At3g15360 PE 2 SV 2

11 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
ProSitePatterns 101 119 19 PS00194 none Thioredoxin family active site. IPR017937
PRINTS 108 117 10 PR00421 none Thioredoxin family signature none
PRINTS 100 108 9 PR00421 none Thioredoxin family signature none
PRINTS 148 159 12 PR00421 none Thioredoxin family signature none
ProSiteProfiles 63 186 124 PS51352 none Thioredoxin domain profile. IPR012336
Pfam 81 182 102 PF00085 none Thioredoxin IPR013766
TIGRFAM 85 183 99 TIGR01068 none thioredoxin: thioredoxin IPR005746
PANTHER 51 185 135 PTHR10438 none none IPR005746
Gene3D 73 185 113 G3DSA:3.40.30.10 none none IPR012336
PANTHER 51 185 135 PTHR10438:SF255 none none none
SUPERFAMILY 69 184 116 SSF52833 none none IPR012336

0 Localization

5 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2003_QTL11_peak_Bud_burst_3P Qrob_Chr09 9 s_1CGP2H_273 v_15801_330 27,16 4,16 48,16 lod 2,3 5,1
Bourran2_2004_QTL12_peak_Bud_burst_3P Qrob_Chr09 9 s_1BDO6G_250 s_1A83AM_496 34,31 9,31 44,31 lod 3,6 7,6
Bourran2_2015_nSecLBD_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 35,81 34,88 37,45 lod 4.4 10.4
PM_1999_QTL15_peak_Bud_burst_3P Qrob_Chr09 9 s_1CGP2H_273 v_15801_330 27,16 9,16 47,16 lod 3,6 6,5
Bourran1_2003_QTL5_peak_Bud_burst_3P Qrob_Chr09 9 s_1ATM17_504 s_1AYZFM_899 29,81 19,81 41,81 lod 3,3 8,9

0 Targeting