Protein : Qrob_P0459800.2 Q. robur
Protein Identifier  ? Qrob_P0459800.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=3) K12393 - AP-1 complex subunit mu Gene Prediction Quality  validated
Protein length 

Sequence

Length: 412  
Kegg Orthology  K12393
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0 Synonyms

5 GO Terms

Identifier Name Description
GO:0005515 protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
GO:0006886 intracellular protein transport The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell.
GO:0006810 transport The directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells, or within a multicellular organism by means of some agent such as a transporter or pore.
GO:0016192 vesicle-mediated transport A cellular transport process in which transported substances are moved in membrane-bounded vesicles; transported substances are enclosed in the vesicle lumen or located in the vesicle membrane. The process begins with a step that directs a substance to the forming vesicle, and includes vesicle budding and coating. Vesicles are then targeted to, and fuse with, an acceptor membrane.
GO:0030131 clathrin adaptor complex A membrane coat adaptor complex that links clathrin to a membrane.

44 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|vvi:100251026 1 397 + 397 none 92.76 428 93.70 0.0 AP-1 complex subunit mu-1-like
blastp_kegg lcl|cmo:103488980 1 397 + 397 none 92.76 428 93.95 0.0 AP-1 complex subunit mu-2
blastp_kegg lcl|csv:101219697 1 397 + 397 none 92.76 428 93.70 0.0 AP-1 complex subunit mu-1-like
blastp_kegg lcl|atr:s00014p00250090 1 397 + 397 none 92.76 428 93.20 0.0 AMTR_s00014p00250090 hypothetical protein
blastp_kegg lcl|gmx:100789477 1 397 + 397 none 92.76 428 93.20 0.0 AP-1 complex subunit mu-2-like
blastp_kegg lcl|rcu:RCOM_1509430 1 397 + 397 none 92.76 428 93.20 0.0 clathrin coat assembly protein ap-1 putative
blastp_kegg lcl|pper:PRUPE_ppa006083mg 1 397 + 397 none 92.76 428 93.20 0.0 hypothetical protein
blastp_kegg lcl|gmx:100801068 1 397 + 397 none 92.76 428 92.95 0.0 AP-1 complex subunit mu-2-like
blastp_kegg lcl|pmum:103321822 1 397 + 397 none 92.76 428 92.95 0.0 AP-1 complex subunit mu-2
blastp_kegg lcl|pvu:PHAVU_003G063300g 1 397 + 397 none 92.76 428 92.44 0.0 hypothetical protein
blastp_pdb 1w63_V 4 397 + 394 Gaps:5 92.43 423 60.87 1e-180 mol:protein length:423 ADAPTOR-RELATED PROTEIN COMPLEX 1 MU 1 SUBUN
blastp_pdb 1w63_R 4 397 + 394 Gaps:5 92.43 423 60.87 1e-180 mol:protein length:423 ADAPTOR-RELATED PROTEIN COMPLEX 1 MU 1 SUBUN
blastp_pdb 1w63_P 4 397 + 394 Gaps:5 92.43 423 60.87 1e-180 mol:protein length:423 ADAPTOR-RELATED PROTEIN COMPLEX 1 MU 1 SUBUN
blastp_pdb 1w63_O 4 397 + 394 Gaps:5 92.43 423 60.87 1e-180 mol:protein length:423 ADAPTOR-RELATED PROTEIN COMPLEX 1 MU 1 SUBUN
blastp_pdb 1w63_N 4 397 + 394 Gaps:5 92.43 423 60.87 1e-180 mol:protein length:423 ADAPTOR-RELATED PROTEIN COMPLEX 1 MU 1 SUBUN
blastp_pdb 1w63_M 4 397 + 394 Gaps:5 92.43 423 60.87 1e-180 mol:protein length:423 ADAPTOR-RELATED PROTEIN COMPLEX 1 MU 1 SUBUN
blastp_pdb 2vgl_M 5 397 + 393 Gaps:17 91.95 435 38.75 2e-96 mol:protein length:435 AP-2 COMPLEX SUBUNIT MU-1
blastp_pdb 2jkt_U 5 397 + 393 Gaps:17 91.95 435 38.75 2e-96 mol:protein length:435 AP-2 COMPLEX SUBUNIT MU-1
blastp_pdb 2jkt_M 5 397 + 393 Gaps:17 91.95 435 38.75 2e-96 mol:protein length:435 AP-2 COMPLEX SUBUNIT MU-1
blastp_pdb 2jkr_U 5 397 + 393 Gaps:17 91.95 435 38.75 2e-96 mol:protein length:435 AP-2 COMPLEX SUBUNIT MU-1
blastp_uniprot_sprot sp|O22715|AP1M2_ARATH 1 397 + 397 none 92.76 428 90.68 0.0 AP-1 complex subunit mu-2 OS Arabidopsis thaliana GN AP1M2 PE 1 SV 1
blastp_uniprot_sprot sp|Q9SAC9|AP1M1_ARATH 1 397 + 397 none 92.76 428 85.39 0.0 AP-1 complex subunit mu-1 OS Arabidopsis thaliana GN AP1M1 PE 3 SV 1
blastp_uniprot_sprot sp|Q9BXS5|AP1M1_HUMAN 4 397 + 394 Gaps:5 92.43 423 60.87 3e-180 AP-1 complex subunit mu-1 OS Homo sapiens GN AP1M1 PE 1 SV 3
blastp_uniprot_sprot sp|Q2KJ81|AP1M1_BOVIN 4 397 + 394 Gaps:5 92.43 423 60.87 3e-180 AP-1 complex subunit mu-1 OS Bos taurus GN AP1M1 PE 1 SV 3
blastp_uniprot_sprot sp|Q32Q06|AP1M1_RAT 4 397 + 394 Gaps:5 92.43 423 60.87 6e-180 AP-1 complex subunit mu-1 OS Rattus norvegicus GN Ap1m1 PE 1 SV 3
blastp_uniprot_sprot sp|P35585|AP1M1_MOUSE 4 397 + 394 Gaps:5 92.43 423 60.61 9e-180 AP-1 complex subunit mu-1 OS Mus musculus GN Ap1m1 PE 1 SV 3
blastp_uniprot_sprot sp|P35602|AP1M_CAEEL 4 397 + 394 Gaps:4 92.42 422 59.74 1e-178 AP-1 complex subunit mu-1-I OS Caenorhabditis elegans GN unc-101 PE 2 SV 2
blastp_uniprot_sprot sp|Q54HS9|AP1M_DICDI 4 397 + 394 Gaps:10 92.52 428 59.85 1e-176 AP-1 complex subunit mu OS Dictyostelium discoideum GN apm1 PE 1 SV 1
blastp_uniprot_sprot sp|Q9Y6Q5|AP1M2_HUMAN 4 397 + 394 Gaps:5 92.43 423 59.08 6e-173 AP-1 complex subunit mu-2 OS Homo sapiens GN AP1M2 PE 1 SV 4
blastp_uniprot_sprot sp|Q3SYW1|AP1M2_BOVIN 4 397 + 394 Gaps:5 92.43 423 59.08 1e-172 AP-1 complex subunit mu-2 OS Bos taurus GN AP1M2 PE 1 SV 3

18 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PIRSF 4 408 405 PIRSF005992 none none IPR001392
SUPERFAMILY 159 397 239 SSF49447 none none IPR028565
PRINTS 103 130 28 PR00314 none Clathrin coat assembly protein signature IPR001392
PRINTS 305 320 16 PR00314 none Clathrin coat assembly protein signature IPR001392
PRINTS 161 189 29 PR00314 none Clathrin coat assembly protein signature IPR001392
PRINTS 15 35 21 PR00314 none Clathrin coat assembly protein signature IPR001392
PRINTS 236 263 28 PR00314 none Clathrin coat assembly protein signature IPR001392
PRINTS 345 356 12 PR00314 none Clathrin coat assembly protein signature IPR001392
Gene3D 5 141 137 G3DSA:3.30.450.60 none none none
SUPERFAMILY 5 141 137 SSF64356 none none IPR011012
Pfam 5 131 127 PF01217 none Clathrin adaptor complex small chain IPR022775
ProSitePatterns 159 179 21 PS00990 none Clathrin adaptor complexes medium chain signature 1. IPR018240
PANTHER 1 397 397 PTHR11998 none none none
PANTHER 1 397 397 PTHR11998:SF11 none none none
Gene3D 159 321 163 G3DSA:2.60.40.1170 none none none
ProSitePatterns 256 270 15 PS00991 none Clathrin adaptor complexes medium chain signature 2. IPR018240
ProSiteProfiles 170 411 242 PS51072 none Mu homology domain (MHD) profile. IPR028565
Pfam 159 398 240 PF00928 none Adaptor complexes medium subunit family IPR008968

0 Localization

1 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
PM_1999_QTL14_peak_Bud_burst_3P Qrob_Chr03 3 s_2F0SI1_756 v_6056_735 11,78 3,78 50,78 lod 2,5 4,5

0 Targeting