Protein : Qrob_P0459220.2 Q. robur
Protein Identifier  ? Qrob_P0459220.2 Organism . Name  Quercus robur
Score  99.1 Score Type  egn
Protein Description  (M=2) K17805 - mitochondrial import inner membrane translocase subunit TIM16 Gene Prediction Quality  validated
Protein length 

Sequence

Length: 158  
Kegg Orthology  K17805
Paste the following link
Lists
This Protein isn't in any lists. Upload a list.

Sequence Feature Displayer

Protein Sequence Displayer

J Browse Displayer

0 Synonyms

2 GO Terms

Identifier Name Description
GO:0005744 mitochondrial inner membrane presequence translocase complex The protein transport machinery of the mitochondrial inner membrane that contains three essential Tim proteins: Tim17 and Tim23 are thought to build a preprotein translocation channel while Tim44 interacts transiently with the matrix heat-shock protein Hsp70 to form an ATP-driven import motor.
GO:0030150 protein import into mitochondrial matrix The import of proteins across the outer and inner mitochondrial membranes into the matrix. Unfolded proteins enter the mitochondrial matrix with a chaperone protein; the information required to target the precursor protein from the cytosol to the mitochondrial matrix is contained within its N-terminal matrix-targeting sequence. Translocation of precursors to the matrix occurs at the rare sites where the outer and inner membranes are close together.

22 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|tcc:TCM_014764 48 157 + 110 none 94.83 116 79.09 1e-58 Transporter Pam16
blastp_kegg lcl|pop:POPTR_0015s11790g 48 157 + 110 none 96.49 114 78.18 7e-58 POPTRDRAFT_808129 hypothetical protein
blastp_kegg lcl|cic:CICLE_v10033104mg 48 157 + 110 none 94.83 116 78.18 1e-57 hypothetical protein
blastp_kegg lcl|cit:102625085 48 157 + 110 none 94.83 116 78.18 1e-57 mitochondrial import inner membrane translocase subunit tim16-like
blastp_kegg lcl|cit:102629029 48 157 + 110 none 89.43 123 78.18 2e-57 mitochondrial import inner membrane translocase subunit tim16-like
blastp_kegg lcl|fve:101309244 48 157 + 110 none 95.65 115 78.18 4e-57 mitochondrial import inner membrane translocase subunit tim-16-like
blastp_kegg lcl|pop:POPTR_0012s11040g 48 157 + 110 none 96.49 114 74.55 2e-55 POPTRDRAFT_834374 magmas-like family protein
blastp_kegg lcl|pmum:103338153 48 157 + 110 none 94.83 116 77.27 3e-55 mitochondrial import inner membrane translocase subunit TIM16
blastp_kegg lcl|pxb:103931312 48 157 + 110 none 94.83 116 76.36 5e-55 mitochondrial import inner membrane translocase subunit Tim16-like
blastp_kegg lcl|mdm:103438658 48 157 + 110 none 94.83 116 76.36 6e-55 mitochondrial import inner membrane translocase subunit TIM16-like
blastp_uniprot_sprot sp|Q9C1W5|TIM16_SCHPO 49 157 + 109 Gaps:9 89.06 128 39.47 2e-14 Mitochondrial import inner membrane translocase subunit tim16 OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN pam16 PE 3 SV 1
blastp_uniprot_sprot sp|Q9VF08|TIM16_DROME 49 157 + 109 Gaps:13 82.27 141 37.93 7e-13 Mitochondrial import inner membrane translocase subunit Tim16 OS Drosophila melanogaster GN blp PE 2 SV 1
blastp_uniprot_sprot sp|Q7S6S4|TIM16_NEUCR 48 153 + 106 Gaps:10 82.27 141 39.66 3e-12 Mitochondrial import inner membrane translocase subunit tim16 OS Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN un-4 PE 3 SV 1
blastp_uniprot_sprot sp|Q9Y3D7|TIM16_HUMAN 49 157 + 109 Gaps:14 90.40 125 43.36 2e-11 Mitochondrial import inner membrane translocase subunit TIM16 OS Homo sapiens GN PAM16 PE 1 SV 2
blastp_uniprot_sprot sp|Q6NTU3|TI16A_XENLA 49 149 + 101 Gaps:16 84.00 125 48.57 4e-11 Mitochondrial import inner membrane translocase subunit tim16-A OS Xenopus laevis GN pam16-a PE 2 SV 1
blastp_uniprot_sprot sp|Q54SV6|TIM16_DICDI 48 155 + 108 Gaps:7 96.46 113 37.61 6e-11 Mitochondrial import inner membrane translocase subunit tim16 OS Dictyostelium discoideum GN timm16 PE 3 SV 1
blastp_uniprot_sprot sp|Q5M995|TI16B_XENLA 49 149 + 101 Gaps:6 86.07 122 40.95 8e-11 Mitochondrial import inner membrane translocase subunit tim16-B OS Xenopus laevis GN pam16-b PE 2 SV 1
blastp_uniprot_sprot sp|Q9CQV1|TIM16_MOUSE 49 157 + 109 Gaps:6 90.40 125 41.59 2e-10 Mitochondrial import inner membrane translocase subunit TIM16 OS Mus musculus GN Pam16 PE 2 SV 1
blastp_uniprot_sprot sp|Q4I375|TIM16_GIBZE 48 149 + 102 Gaps:10 79.71 138 40.91 2e-10 Mitochondrial import inner membrane translocase subunit TIM16 OS Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN PAM16 PE 3 SV 1
blastp_uniprot_sprot sp|Q5XGJ0|TIM16_XENTR 49 149 + 101 Gaps:6 84.00 125 41.90 8e-10 Mitochondrial import inner membrane translocase subunit tim16 OS Xenopus tropicalis GN pam16 PE 2 SV 1
rpsblast_cdd gnl|CDD|112471 48 157 + 110 Gaps:11 90.55 127 40.00 6e-12 pfam03656 Pam16 Pam16. The Pam16 protein is the fifth essential subunit of the pre-sequence translocase-associated protein import motor (PAM). In Saccharomyces cerevisiae Pam16 is required for preprotein translocation into the matrix but not for protein insertion into the inner membrane. Pam16 has a degenerate J domain. J-domain proteins play important regulatory roles as co-chaperones recruiting Hsp70 partners and accelerating the ATP-hydrolysis step of the chaperone cycle. Pam16's J-like domain strongly interacts with Pam18's J domain leading to a productive interaction of Pam18 with mtHsp70 at the mitochondria import channel. Pam18 stimulates the ATPase activity of mtHsp70.
rpsblast_kog gnl|CDD|38652 48 157 + 110 Gaps:7 88.64 132 45.30 5e-25 KOG3442 KOG3442 KOG3442 Uncharacterized conserved protein [Function unknown].

7 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 10 18 9 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
Pfam 49 156 108 PF03656 none Pam16 none
PANTHER 44 157 114 PTHR12388 none none IPR005341
Phobius 19 26 8 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
Phobius 1 26 26 SIGNAL_PEPTIDE none Signal peptide region none
Phobius 27 157 131 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 1 9 9 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none

0 Localization

5 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2002_QTL13_peak_Bud_burst_3P Qrob_Chr10 10 s_1B1AG7_637 s_1A3A1N_709 19,44 0 49,44 lod 3 5,6
Bourran2_2002_QTL15_peak_Bud_burst_A4 Qrob_Chr10 10 v_7579_71 s_1ATZMJ_189 23,94 0 43,64 lod 3,7 5,4
Bourran2_2014_vSeqBC_3P Qrob_Chr10 10 s_1A6CK6_610 v_7092_29 4,28 0 23,27 lod 2,8619 7
Champenoux_2015_nPriLBD_3P Qrob_Chr10 10 v_15000_157 v_15000_310 15,68 15,9 15,91 lod 2.4 5.5
PM_1999_QTL16_peak_Bud_burst_3P Qrob_Chr10 10 s_1B6YNI_505 s_1A1ZO_1322 7,48 0 31,48 lod 4 7,1

0 Targeting