Protein : Qrob_P0458970.2 Q. robur
Protein Identifier  ? Qrob_P0458970.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=2) K08054 - calnexin Gene Prediction Quality  validated
Protein length 

Sequence

Length: 220  
Kegg Orthology  K08054
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0 Synonyms

5 GO Terms

Identifier Name Description
GO:0005515 protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
GO:0005783 endoplasmic reticulum The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached).
GO:0006457 protein folding The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure.
GO:0051082 unfolded protein binding Interacting selectively and non-covalently with an unfolded protein.
GO:0005509 calcium ion binding Interacting selectively and non-covalently with calcium ions (Ca2+).

27 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pda:103698092 2 186 + 185 none 34.13 542 76.76 4e-95 calnexin homolog
blastp_kegg lcl|brp:103873468 1 205 + 205 none 38.61 531 74.63 2e-92 calnexin homolog 1
blastp_kegg lcl|ath:AT5G61790 1 204 + 204 none 38.49 530 74.51 3e-92 CNX1 calnexin 1
blastp_kegg lcl|aly:ARALYDRAFT_496347 1 204 + 204 none 38.56 529 74.51 3e-92 calnexin 1
blastp_kegg lcl|brp:103854961 1 205 + 205 none 38.32 535 74.63 1e-91 calnexin homolog 1-like
blastp_kegg lcl|vvi:100259611 1 187 + 187 Gaps:1 34.51 539 82.80 1e-91 calnexin homolog
blastp_kegg lcl|crb:CARUB_v10026443mg 1 174 + 174 none 40.37 431 82.18 1e-90 hypothetical protein
blastp_kegg lcl|brp:103837395 1 205 + 205 none 38.32 535 73.17 1e-90 CAX1 calnexin homolog 1-like
blastp_kegg lcl|sly:101247033 1 186 + 186 Gaps:2 34.20 538 74.46 2e-90 calnexin homolog 1-like
blastp_kegg lcl|sot:102587151 1 186 + 186 Gaps:2 34.20 538 73.91 3e-90 calnexin homolog
blastp_pdb 1jhn_A 2 145 + 144 Gaps:1 34.20 424 59.31 7e-56 mol:protein length:424 calnexin
blastp_pdb 3rg0_A 19 160 + 142 Gaps:28 38.55 332 42.97 1e-18 mol:protein length:332 Calreticulin
blastp_pdb 1hhn_A 3 98 + 96 Gaps:41 91.09 101 63.04 1e-14 mol:protein length:101 CALRETICULIN
blastp_pdb 1k9c_A 3 61 + 59 Gaps:7 70.27 74 63.46 7e-08 mol:protein length:74 CALRETICULIN
blastp_uniprot_sprot sp|P29402|CALX1_ARATH 1 204 + 204 none 38.49 530 74.51 1e-93 Calnexin homolog 1 OS Arabidopsis thaliana GN CNX1 PE 1 SV 1
blastp_uniprot_sprot sp|Q38798|CALX2_ARATH 1 187 + 187 none 35.15 532 75.94 4e-87 Calnexin homolog 2 OS Arabidopsis thaliana GN At5g07340 PE 2 SV 2
blastp_uniprot_sprot sp|Q39817|CALX_SOYBN 1 186 + 186 none 34.07 546 76.88 3e-86 Calnexin homolog OS Glycine max PE 2 SV 1
blastp_uniprot_sprot sp|O82709|CALX_PEA 2 151 + 150 Gaps:2 26.86 551 86.49 1e-73 Calnexin homolog OS Pisum sativum PE 1 SV 1
blastp_uniprot_sprot sp|Q39994|CALX_HELTU 1 176 + 176 Gaps:6 33.70 540 65.38 7e-64 Calnexin homolog OS Helianthus tuberosus PE 2 SV 1
blastp_uniprot_sprot sp|P35564|CALX_MOUSE 2 178 + 177 Gaps:9 28.76 591 57.65 1e-55 Calnexin OS Mus musculus GN Canx PE 1 SV 1
blastp_uniprot_sprot sp|P35565|CALX_RAT 2 145 + 144 Gaps:1 24.53 591 61.38 2e-55 Calnexin OS Rattus norvegicus GN Canx PE 1 SV 1
blastp_uniprot_sprot sp|P24643|CALX_CANFA 2 145 + 144 Gaps:1 24.45 593 59.31 2e-54 Calnexin OS Canis familiaris GN CANX PE 1 SV 3
blastp_uniprot_sprot sp|Q5R440|CALX_PONAB 2 145 + 144 Gaps:1 24.49 592 60.00 3e-54 Calnexin OS Pongo abelii GN CANX PE 2 SV 2
blastp_uniprot_sprot sp|P27824|CALX_HUMAN 2 145 + 144 Gaps:1 24.49 592 58.62 3e-53 Calnexin OS Homo sapiens GN CANX PE 1 SV 2
rpsblast_cdd gnl|CDD|189477 1 130 + 130 Gaps:3 35.93 359 68.22 7e-51 pfam00262 Calreticulin Calreticulin family.
rpsblast_kog gnl|CDD|35894 1 209 + 209 Gaps:1 37.63 558 49.05 1e-55 KOG0675 KOG0675 KOG0675 Calnexin [Posttranslational modification protein turnover chaperones].
rpsblast_kog gnl|CDD|35893 3 200 + 198 Gaps:21 43.60 406 42.94 1e-26 KOG0674 KOG0674 KOG0674 Calreticulin [Posttranslational modification protein turnover chaperones].

11 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 1 156 156 PTHR11073 none none IPR001580
PANTHER 176 218 43 PTHR11073 none none IPR001580
SUPERFAMILY 3 100 98 SSF63887 none none IPR009033
Gene3D 2 118 117 G3DSA:2.10.250.10 none none IPR009033
PANTHER 176 218 43 PTHR11073:SF1 none none none
PANTHER 1 156 156 PTHR11073:SF1 none none none
ProSitePatterns 22 34 13 PS00805 none Calreticulin family repeated motif signature. IPR018124
PRINTS 79 98 20 PR00626 none Calreticulin signature IPR001580
PRINTS 22 44 23 PR00626 none Calreticulin signature IPR001580
PRINTS 111 131 21 PR00626 none Calreticulin signature IPR001580
Pfam 2 130 129 PF00262 none Calreticulin family IPR001580

0 Localization

5 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2002_QTL13_peak_Bud_burst_3P Qrob_Chr10 10 s_1B1AG7_637 s_1A3A1N_709 19,44 0 49,44 lod 3 5,6
Bourran2_2002_QTL15_peak_Bud_burst_A4 Qrob_Chr10 10 v_7579_71 s_1ATZMJ_189 23,94 0 43,64 lod 3,7 5,4
Bourran2_2014_vSeqBC_3P Qrob_Chr10 10 s_1A6CK6_610 v_7092_29 4,28 0 23,27 lod 2,8619 7
Champenoux_2015_nPriLBD_3P Qrob_Chr10 10 v_15000_157 v_15000_310 15,68 15,9 15,91 lod 2.4 5.5
PM_1999_QTL16_peak_Bud_burst_3P Qrob_Chr10 10 s_1B6YNI_505 s_1A1ZO_1322 7,48 0 31,48 lod 4 7,1

0 Targeting