Protein : Qrob_P0455080.2 Q. robur
Protein Identifier  ? Qrob_P0455080.2 Organism . Name  Quercus robur
Score  98.0 Score Type  egn
Protein Description  (M=1) PTHR16127 - TAXILIN Gene Prediction Quality  validated
Protein length 

Sequence

Length: 454  
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Protein Sequence Displayer

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0 Synonyms

1 GO Terms

Identifier Name Description
GO:0019905 syntaxin binding Interacting selectively and non-covalently with a syntaxin, a SNAP receptor involved in the docking of synaptic vesicles at the presynaptic zone of a synapse.

22 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pmum:103332392 1 447 + 447 Gaps:9 97.85 466 79.39 0.0 beta-taxilin
blastp_kegg lcl|cit:102611312 1 453 + 453 Gaps:6 99.14 463 75.38 0.0 beta-taxilin-like
blastp_kegg lcl|pxb:103926637 1 453 + 453 Gaps:8 99.14 465 76.36 0.0 beta-taxilin-like
blastp_kegg lcl|mdm:103444805 1 453 + 453 Gaps:8 99.14 465 75.92 0.0 beta-taxilin-like
blastp_kegg lcl|mdm:103432421 1 453 + 453 Gaps:9 97.67 473 75.97 0.0 beta-taxilin-like
blastp_kegg lcl|pxb:103966640 1 453 + 453 Gaps:9 99.14 466 75.32 0.0 beta-taxilin-like
blastp_kegg lcl|fve:101303366 1 444 + 444 Gaps:8 97.19 463 74.44 0.0 alpha-taxilin-like
blastp_kegg lcl|pper:PRUPE_ppa005338mg 1 447 + 447 Gaps:34 97.73 441 80.05 0.0 hypothetical protein
blastp_kegg lcl|tcc:TCM_043098 1 453 + 453 Gaps:33 99.08 434 79.30 0.0 Uncharacterized protein isoform 1
blastp_kegg lcl|pop:POPTR_0010s22640g 1 453 + 453 Gaps:8 99.13 461 72.65 0.0 POPTRDRAFT_567576 hypothetical protein
blastp_uniprot_sprot sp|Q6PAM1|TXLNA_MOUSE 201 442 + 242 Gaps:13 45.67 554 39.53 8e-36 Alpha-taxilin OS Mus musculus GN Txlna PE 2 SV 1
blastp_uniprot_sprot sp|P40222|TXLNA_HUMAN 204 442 + 239 Gaps:13 45.79 546 40.00 1e-35 Alpha-taxilin OS Homo sapiens GN TXLNA PE 1 SV 3
blastp_uniprot_sprot sp|Q9NUQ3|TXLNG_HUMAN 204 442 + 239 Gaps:17 47.35 528 37.20 6e-31 Gamma-taxilin OS Homo sapiens GN TXLNG PE 1 SV 2
blastp_uniprot_sprot sp|Q8BHN1|TXLNG_MOUSE 204 442 + 239 Gaps:17 47.71 524 37.20 8e-31 Gamma-taxilin OS Mus musculus GN Txlng PE 1 SV 1
blastp_uniprot_sprot sp|Q8VBT1|TXLNB_MOUSE 201 444 + 244 Gaps:17 37.23 685 34.90 1e-29 Beta-taxilin OS Mus musculus GN Txlnb PE 2 SV 2
blastp_uniprot_sprot sp|Q8N3L3|TXLNB_HUMAN 201 453 + 253 Gaps:17 38.60 684 34.85 2e-29 Beta-taxilin OS Homo sapiens GN TXLNB PE 1 SV 3
blastp_uniprot_sprot sp|Q9I969|TXLNB_CHICK 201 453 + 253 Gaps:17 39.05 676 35.23 3e-28 Beta-taxilin OS Gallus gallus GN TXLNB PE 2 SV 1
rpsblast_cdd gnl|CDD|204295 177 442 + 266 Gaps:7 88.35 309 46.52 3e-61 pfam09728 Taxilin Myosin-like coiled-coil protein. Taxilin contains an extraordinarily long coiled-coil domain in its C-terminal half and is ubiquitously expressed. It is a novel binding partner of several syntaxin family members and is possibly involved in Ca2+-dependent exocytosis in neuroendocrine cells. Gamma-taxilin described as leucine zipper protein Factor Inhibiting ATF4-mediated Transcription (FIAT) localises to the nucleus in osteoblasts and dimerises with ATF4 to form inactive dimers thus inhibiting ATF4-mediated transcription.
rpsblast_cdd gnl|CDD|162739 255 451 + 197 Gaps:3 16.96 1179 14.00 4e-07 TIGR02168 SMC_prok_B chromosome segregation protein SMC common bacterial type. SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria archaea and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle.
rpsblast_kog gnl|CDD|37061 170 444 + 275 Gaps:11 73.15 391 30.77 2e-20 KOG1850 KOG1850 KOG1850 Myosin-like coiled-coil protein [Cytoskeleton].
rpsblast_kog gnl|CDD|35471 189 440 + 252 Gaps:24 23.65 1074 21.26 5e-08 KOG0250 KOG0250 KOG0250 DNA repair protein RAD18 (SMC family protein) [Replication recombination and repair].
rpsblast_kog gnl|CDD|36214 170 442 + 273 Gaps:14 20.03 1293 18.53 3e-07 KOG0996 KOG0996 KOG0996 Structural maintenance of chromosome protein 4 (chromosome condensation complex Condensin subunit C) [Chromatin structure and dynamics Cell cycle control cell division chromosome partitioning].

6 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Coils 249 298 50 Coil none none none
PANTHER 177 444 268 PTHR16127 none none IPR026183
Coils 206 241 36 Coil none none none
Pfam 168 442 275 PF09728 none Myosin-like coiled-coil protein IPR026183
Coils 302 337 36 Coil none none none
Coils 372 449 78 Coil none none none

0 Localization

6 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2014_aSeqBC_A4 Qrob_Chr08 8 v_15999_278 v_AP13YL15_395 32,52 4,22 57,22 lod 2,7561 6,7
Bourran2_2014_nFork*_A4 Qrob_Chr08 8 PIE175 s_1CD7GJ_1398 31,22 5,24 57,24 lod 2,6724 6,8
Champenoux_2015_nSeqBC_A4 Qrob_Chr08 8 v_AD7YD13_501 s_1A7IED_780 43,44 43,42 43,99 lod 3.7 8.9
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL3_d13Cf Qrob_Chr08 8 v_5216_549 v_11625_20 37.08 12,26 54,9 lod 6.5888 0.04

0 Targeting