Protein : Qrob_P0451270.2 Q. robur
Protein Identifier  ? Qrob_P0451270.2 Organism . Name  Quercus robur
Score  49.0 Score Type  egn
Protein Description  (M=1) K13280 - signal peptidase, endoplasmic reticulum-type [EC:3.4.-.-] Code Enzyme  EC:3.4.21.89
Gene Prediction Quality  validated Protein length 

Sequence

Length: 118  
Kegg Orthology  K13280
Paste the following link
Lists
This Protein isn't in any lists. Upload a list.

Sequence Feature Displayer

Protein Sequence Displayer

J Browse Displayer

0 Synonyms

3 GO Terms

Identifier Name Description
GO:0016020 membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
GO:0008233 peptidase activity Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid.
GO:0006465 signal peptide processing The proteolytic removal of a signal peptide from a protein during or after transport to a specific location in the cell.

21 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|csv:101225676 1 91 + 91 Gaps:24 63.89 180 77.39 3e-49 signal peptidase complex catalytic subunit SEC11C-like
blastp_kegg lcl|csv:101215961 1 91 + 91 Gaps:24 63.89 180 77.39 3e-49 signal peptidase complex catalytic subunit SEC11C-like
blastp_kegg lcl|pda:103706168 1 117 + 117 Gaps:25 73.58 193 57.04 5e-49 signal peptidase complex catalytic subunit SEC11A-like
blastp_kegg lcl|vvi:100257730 1 91 + 91 Gaps:24 63.89 180 76.52 5e-49 signal peptidase complex catalytic subunit SEC11C-like
blastp_kegg lcl|cmo:103494709 1 91 + 91 Gaps:24 63.89 180 76.52 6e-49 signal peptidase complex catalytic subunit SEC11A
blastp_kegg lcl|pper:PRUPE_ppa012183mg 1 91 + 91 Gaps:24 63.89 180 76.52 1e-48 hypothetical protein
blastp_kegg lcl|pop:POPTR_0001s17120g 1 91 + 91 Gaps:24 63.89 180 75.65 1e-48 POPTRDRAFT_829510 signal peptidase family protein
blastp_kegg lcl|pxb:103940381 1 91 + 91 Gaps:24 63.89 180 75.65 1e-48 signal peptidase complex catalytic subunit SEC11A-like
blastp_kegg lcl|mdm:103437246 1 91 + 91 Gaps:24 63.89 180 75.65 1e-48 signal peptidase complex catalytic subunit SEC11C
blastp_kegg lcl|mdm:103407131 1 91 + 91 Gaps:24 63.89 180 75.65 2e-48 signal peptidase complex catalytic subunit SEC11A-like
blastp_uniprot_sprot sp|P42667|SC11A_RAT 6 91 + 86 Gaps:26 61.45 179 49.09 2e-27 Signal peptidase complex catalytic subunit SEC11A OS Rattus norvegicus GN Sec11a PE 2 SV 1
blastp_uniprot_sprot sp|Q9R0P6|SC11A_MOUSE 6 91 + 86 Gaps:26 61.45 179 49.09 2e-27 Signal peptidase complex catalytic subunit SEC11A OS Mus musculus GN Sec11a PE 2 SV 1
blastp_uniprot_sprot sp|Q5R9C7|SC11A_PONAB 6 91 + 86 Gaps:26 61.45 179 48.18 1e-26 Signal peptidase complex catalytic subunit SEC11A OS Pongo abelii GN SEC11A PE 2 SV 1
blastp_uniprot_sprot sp|P67812|SC11A_HUMAN 6 91 + 86 Gaps:26 61.45 179 48.18 1e-26 Signal peptidase complex catalytic subunit SEC11A OS Homo sapiens GN SEC11A PE 1 SV 1
blastp_uniprot_sprot sp|P67811|SC11A_CANFA 6 91 + 86 Gaps:26 61.45 179 48.18 1e-26 Signal peptidase complex catalytic subunit SEC11A OS Canis familiaris GN SEC11A PE 1 SV 1
blastp_uniprot_sprot sp|P67810|SC11A_BOVIN 6 91 + 86 Gaps:26 61.45 179 48.18 1e-26 Signal peptidase complex catalytic subunit SEC11A OS Bos taurus GN SEC11A PE 2 SV 1
blastp_uniprot_sprot sp|Q5RC30|SC11C_PONAB 6 91 + 86 Gaps:26 57.29 192 46.36 3e-24 Signal peptidase complex catalytic subunit SEC11C OS Pongo abelii GN SEC11C PE 2 SV 3
blastp_uniprot_sprot sp|Q9BY50|SC11C_HUMAN 6 91 + 86 Gaps:26 57.29 192 46.36 3e-24 Signal peptidase complex catalytic subunit SEC11C OS Homo sapiens GN SEC11C PE 1 SV 3
blastp_uniprot_sprot sp|Q9WTR7|SC11C_RAT 6 91 + 86 Gaps:26 57.29 192 45.45 8e-24 Signal peptidase complex catalytic subunit SEC11C OS Rattus norvegicus GN Sec11c PE 2 SV 3
blastp_uniprot_sprot sp|P13679|SC11C_CANFA 6 91 + 86 Gaps:26 57.29 192 45.45 8e-24 Signal peptidase complex catalytic subunit SEC11C OS Canis familiaris GN SEC11C PE 1 SV 3
rpsblast_kog gnl|CDD|38552 1 91 + 91 Gaps:26 63.89 180 47.83 2e-31 KOG3342 KOG3342 KOG3342 Signal peptidase I [Intracellular trafficking secretion and vesicular transport].

4 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 1 91 91 PTHR10806 none none IPR001733
Phobius 20 40 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 1 19 19 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 41 117 77 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none

1 Localization

Analysis Start End Length
TMHMM 15 37 22

6 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran_2000_2002_QTL6_Delta.F Qrob_Chr03 3 s_2HYXJ2_207 s_1AUAXK_317 29.12 6,3 45,37 lod 3.1666 0.026
Bourran2_2014_nLBD_3P Qrob_Chr03 3 s_1ET7H8_604 s_1BYNB5_834 23,73 0 46,72 lod 1,7573 3,8
PM_1999_QTL14_peak_Bud_burst_3P Qrob_Chr03 3 s_2F0SI1_756 v_6056_735 11,78 3,78 50,78 lod 2,5 4,5
Bourran2_2014_rEpiBC*_3P Qrob_Chr03 3 s_1A3B3X_1163 s_1DKGMO_450 23,04 4,92 41,12 lod 2,5668 7

0 Targeting